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The map label for this gene is ywbD [H]

Identifier: 52140966

GI number: 52140966

Start: 4392278

End: 4393477

Strand: Reverse

Name: ywbD [H]

Synonym: BCZK4285

Alternate gene names: 52140966

Gene position: 4393477-4392278 (Counterclockwise)

Preceding gene: 52140964

Following gene: 52140967

Centisome position: 82.88

GC content: 33.92

Gene sequence:

>1200_bases
ATGCGATCAGAAGTAACTGTAAAAATAAAACCGAAATTTATAAAAGAAATTAAAAGTGGATATCCGCTTATTTTAAAAGA
TGCGATTCAAAATTTAAATGATGTTCAGGAAGAAGGAACAATCATTAAAGTGGTAGATGAGAAGAACCACTTTGTCGGAA
AAGGTTATTATGGAAAACAAAATAAAGGATACGGTTGGATTTTAACGAGAAAAGAGAGTGAACAAATTAATCAATCTTTC
TTTGAAAGTAAAATAAAATCTGCCTTACATAAACGAAAACAATTTTACAAATCAAGTGATACGACAGCATTCCGCGCCCT
AAACGGTGAAGGTGATGGTCTTGGCGGCTTAATCATCGATTATTATGACGGTTATTATGTATTGAGCTGGTATAGTGAAG
GGATTTATACTTTCAGAGATGAGATTATAGCTGCTCTTCAAAAAGTAGCAAACTTTAAAGGTATTTATGAGAAGAAGCGT
TTTGATACGAAAGGGAAATACATTGAAGGCGATGATTTCGTAGCAGGAGAGCGCGGTGAGTTCCCGCTTATCGTAAAAGA
GAACGGTGTGAACTTCGCTGTTTATTTAAATGACGGAGCGATGGTTGGGGTATTTTTAGATCAACGTAACGTGCGAAAAC
AAATTCGTGATAAATATGCGAAGGGAAGAACTGTGTTAAATATGTTCTCTTATACAGGTGCTTTTTCTGTATTTGCAGCG
CTTGGCGGAGCAAGCAAAACGACGAGTGTCGACCTTGCAAATCGTAGTTTAAGTAAAACGATTGAGCAGTTTAGTGTAAA
TGAAGTTGATTATGAAGCGCAAGATATTATTGTAGAAGATGTATTCCTTTACTTTAAATATGCAGCGAAGAAAAAGATGA
AATTTGATATGGTCGTACTTGATCCTCCAAGCTTTGCACGCTCAAAGAAATATACATTTAGTGCAGCGAAAGATTATAAA
AATTTATTAAAAGAAACAATTGCTATTACAGAAAATAACGGGATTATCGTTGCTTCTACAAATTGTAGTGCGTTCGATAT
GAAAAAGTTTAAAGGCTTTATCGATACAGCATTTAAAGAAATGAATGGCAAATATAAAATATTAGAAGAACATTCTTTAC
CAGAAGATTTCCGTACCATTGATCAATTTAAAGAAGGAGACTATTTAAAAGTAGTTTTCATCGAGAAAATTAAAGGGTAA

Upstream 100 bases:

>100_bases
CAAAGCAATAATATGGTATAGTGAAACGAGGCTGTTTTTCAGTCTCGTTTTTTAAGTGCTTCCTATAAAGAAAGCATGCA
AATGGAAAGGAAGTTTTTAT

Downstream 100 bases:

>100_bases
TAAAGAAAAGGAGCTCGAGTTTACTTGAGCTCCTTTTCTTATTGAACGATATTTTGTACTCTACCGACTTGCCCGTCCTG
CAATCGAACTTTAATGCCAT

Product: methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 399; Mature: 399

Protein sequence:

>399_residues
MRSEVTVKIKPKFIKEIKSGYPLILKDAIQNLNDVQEEGTIIKVVDEKNHFVGKGYYGKQNKGYGWILTRKESEQINQSF
FESKIKSALHKRKQFYKSSDTTAFRALNGEGDGLGGLIIDYYDGYYVLSWYSEGIYTFRDEIIAALQKVANFKGIYEKKR
FDTKGKYIEGDDFVAGERGEFPLIVKENGVNFAVYLNDGAMVGVFLDQRNVRKQIRDKYAKGRTVLNMFSYTGAFSVFAA
LGGASKTTSVDLANRSLSKTIEQFSVNEVDYEAQDIIVEDVFLYFKYAAKKKMKFDMVVLDPPSFARSKKYTFSAAKDYK
NLLKETIAITENNGIIVASTNCSAFDMKKFKGFIDTAFKEMNGKYKILEEHSLPEDFRTIDQFKEGDYLKVVFIEKIKG

Sequences:

>Translated_399_residues
MRSEVTVKIKPKFIKEIKSGYPLILKDAIQNLNDVQEEGTIIKVVDEKNHFVGKGYYGKQNKGYGWILTRKESEQINQSF
FESKIKSALHKRKQFYKSSDTTAFRALNGEGDGLGGLIIDYYDGYYVLSWYSEGIYTFRDEIIAALQKVANFKGIYEKKR
FDTKGKYIEGDDFVAGERGEFPLIVKENGVNFAVYLNDGAMVGVFLDQRNVRKQIRDKYAKGRTVLNMFSYTGAFSVFAA
LGGASKTTSVDLANRSLSKTIEQFSVNEVDYEAQDIIVEDVFLYFKYAAKKKMKFDMVVLDPPSFARSKKYTFSAAKDYK
NLLKETIAITENNGIIVASTNCSAFDMKKFKGFIDTAFKEMNGKYKILEEHSLPEDFRTIDQFKEGDYLKVVFIEKIKG
>Mature_399_residues
MRSEVTVKIKPKFIKEIKSGYPLILKDAIQNLNDVQEEGTIIKVVDEKNHFVGKGYYGKQNKGYGWILTRKESEQINQSF
FESKIKSALHKRKQFYKSSDTTAFRALNGEGDGLGGLIIDYYDGYYVLSWYSEGIYTFRDEIIAALQKVANFKGIYEKKR
FDTKGKYIEGDDFVAGERGEFPLIVKENGVNFAVYLNDGAMVGVFLDQRNVRKQIRDKYAKGRTVLNMFSYTGAFSVFAA
LGGASKTTSVDLANRSLSKTIEQFSVNEVDYEAQDIIVEDVFLYFKYAAKKKMKFDMVVLDPPSFARSKKYTFSAAKDYK
NLLKETIAITENNGIIVASTNCSAFDMKKFKGFIDTAFKEMNGKYKILEEHSLPEDFRTIDQFKEGDYLKVVFIEKIKG

Specific function: Unknown

COG id: COG1092

COG function: function code R; Predicted SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PUA domain [H]

Homologues:

Organism=Escherichia coli, GI145693111, Length=380, Percent_Identity=28.1578947368421, Blast_Score=169, Evalue=3e-43,
Organism=Escherichia coli, GI1787181, Length=174, Percent_Identity=34.4827586206897, Blast_Score=100, Evalue=3e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002478
- InterPro:   IPR015947
- InterPro:   IPR019614 [H]

Pfam domain/function: PF10672 Methyltrans_SAM [H]

EC number: NA

Molecular weight: Translated: 45548; Mature: 45548

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: PS50890 PUA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSEVTVKIKPKFIKEIKSGYPLILKDAIQNLNDVQEEGTIIKVVDEKNHFVGKGYYGKQ
CCCCEEEEECHHHHHHHHCCCCEEHHHHHHHHHHHHHCCCEEEEEECCCCEEECCCCCCC
NKGYGWILTRKESEQINQSFFESKIKSALHKRKQFYKSSDTTAFRALNGEGDGLGGLIID
CCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEE
YYDGYYVLSWYSEGIYTFRDEIIAALQKVANFKGIYEKKRFDTKGKYIEGDDFVAGERGE
ECCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCEECCCCCC
FPLIVKENGVNFAVYLNDGAMVGVFLDQRNVRKQIRDKYAKGRTVLNMFSYTGAFSVFAA
CEEEEEECCCEEEEEECCCEEEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
LGGASKTTSVDLANRSLSKTIEQFSVNEVDYEAQDIIVEDVFLYFKYAAKKKMKFDMVVL
HCCCCCCCEEHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEE
DPPSFARSKKYTFSAAKDYKNLLKETIAITENNGIIVASTNCSAFDMKKFKGFIDTAFKE
CCCCHHCCCCEEEHHHHHHHHHHHHHHEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHH
MNGKYKILEEHSLPEDFRTIDQFKEGDYLKVVFIEKIKG
CCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEEEEECCC
>Mature Secondary Structure
MRSEVTVKIKPKFIKEIKSGYPLILKDAIQNLNDVQEEGTIIKVVDEKNHFVGKGYYGKQ
CCCCEEEEECHHHHHHHHCCCCEEHHHHHHHHHHHHHCCCEEEEEECCCCEEECCCCCCC
NKGYGWILTRKESEQINQSFFESKIKSALHKRKQFYKSSDTTAFRALNGEGDGLGGLIID
CCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEE
YYDGYYVLSWYSEGIYTFRDEIIAALQKVANFKGIYEKKRFDTKGKYIEGDDFVAGERGE
ECCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCEECCCCCC
FPLIVKENGVNFAVYLNDGAMVGVFLDQRNVRKQIRDKYAKGRTVLNMFSYTGAFSVFAA
CEEEEEECCCEEEEEECCCEEEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
LGGASKTTSVDLANRSLSKTIEQFSVNEVDYEAQDIIVEDVFLYFKYAAKKKMKFDMVVL
HCCCCCCCEEHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEE
DPPSFARSKKYTFSAAKDYKNLLKETIAITENNGIIVASTNCSAFDMKKFKGFIDTAFKE
CCCCHHCCCCEEEHHHHHHHHHHHHHHEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHH
MNGKYKILEEHSLPEDFRTIDQFKEGDYLKVVFIEKIKG
CCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]