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The map label for this gene is ydbB [H]

Identifier: 52140888

GI number: 52140888

Start: 4476914

End: 4477246

Strand: Reverse

Name: ydbB [H]

Synonym: BCZK4363

Alternate gene names: 52140888

Gene position: 4477246-4476914 (Counterclockwise)

Preceding gene: 52140885

Following gene: 52140887

Centisome position: 84.46

GC content: 32.13

Gene sequence:

>333_bases
ATGGAAACTGTGAACTTAATAGAATTAACAAAGGACATTCAAGATCAACATAAAAACTTCGTCGTTTCAAATGTAAATAG
TCATTGTTTACGAATCGCTGTATTTACTGGTGAATATGATTGGCACTATCATTCTAATTCGGATGAATTATTTATTGTGT
TAGAGGGAGAATTACTTATTGATTTTGAAGATGGAGAAACAGCGGTATTAAAGTCAAATGATTCTATTTTAATTCCAGCG
TGTACGATTCATAGAACGAGAGCATTAAAGAGAACGGTAAATCTTTGTTTTGAACATATAGAGGCGGATACGATTAAAGT
GGAGCAATTATGA

Upstream 100 bases:

>100_bases
GTGATTGTAGTGGCTCAAGTGATGGTGGAGGAGATTGCGGAGGTGGTGGAGACTAAGTTGATTTTTCAGAAGAGCGACTA
ATGAAAGGATGAGACGAAAG

Downstream 100 bases:

>100_bases
AAAAATTATCTGTAGCCGAGTATAGAAAAATCCTTCCGATTTTAGAAAGCCATACAAAAACGACGACGTTTGCTTATGCG
GTATGTGATCAAGTGATAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
METVNLIELTKDIQDQHKNFVVSNVNSHCLRIAVFTGEYDWHYHSNSDELFIVLEGELLIDFEDGETAVLKSNDSILIPA
CTIHRTRALKRTVNLCFEHIEADTIKVEQL

Sequences:

>Translated_110_residues
METVNLIELTKDIQDQHKNFVVSNVNSHCLRIAVFTGEYDWHYHSNSDELFIVLEGELLIDFEDGETAVLKSNDSILIPA
CTIHRTRALKRTVNLCFEHIEADTIKVEQL
>Mature_110_residues
METVNLIELTKDIQDQHKNFVVSNVNSHCLRIAVFTGEYDWHYHSNSDELFIVLEGELLIDFEDGETAVLKSNDSILIPA
CTIHRTRALKRTVNLCFEHIEADTIKVEQL

Specific function: Unknown

COG id: COG0662

COG function: function code G; Mannose-6-phosphate isomerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SchB/CurC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013096
- InterPro:   IPR011051
- InterPro:   IPR019780
- InterPro:   IPR014710 [H]

Pfam domain/function: PF07883 Cupin_2 [H]

EC number: NA

Molecular weight: Translated: 12656; Mature: 12656

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METVNLIELTKDIQDQHKNFVVSNVNSHCLRIAVFTGEYDWHYHSNSDELFIVLEGELLI
CCCCHHHHHHHHHHHHCCCEEEECCCCCEEEEEEEECCEEEEEECCCCCEEEEEECCEEE
DFEDGETAVLKSNDSILIPACTIHRTRALKRTVNLCFEHIEADTIKVEQL
EECCCCEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEECC
>Mature Secondary Structure
METVNLIELTKDIQDQHKNFVVSNVNSHCLRIAVFTGEYDWHYHSNSDELFIVLEGELLI
CCCCHHHHHHHHHHHHCCCEEEECCCCCEEEEEEEECCEEEEEECCCCCEEEEEECCEEE
DFEDGETAVLKSNDSILIPACTIHRTRALKRTVNLCFEHIEADTIKVEQL
EECCCCEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]