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The map label for this gene is yizB [H]

Identifier: 52140817

GI number: 52140817

Start: 4536292

End: 4536660

Strand: Direct

Name: yizB [H]

Synonym: BCZK4436

Alternate gene names: 52140817

Gene position: 4536292-4536660 (Clockwise)

Preceding gene: 52140822

Following gene: 52140818

Centisome position: 85.58

GC content: 33.6

Gene sequence:

>369_bases
ATGGAAAAAAATGATAATTTTATAATTCAATTACGTAAAGGTGTTTTTGATCTCGCTATATTGTCTTTAATAAGCAAACA
ACCTATGTACGGATACGAAATTACTAGCTCATTACAAGCTATCCCTGTATTTCATATTCCGAACGGTTCAATTTATCCTA
TATTAAATCGAATCACGAAAAACCATTGGGCTGTTTCCTATTGGGAAGAGTCTGGTGATGGACCAAAAAGAAAATACTAT
CGAATTACAGACGAGGGGAGAGAAATTTTACATAGTCGCTTACACGATTATGATGCAGTGTATCAAGCTCTAATGTTACT
AGCTAAAGGAGAGGATAAAAATGAACAAGGAACAATTCTTTGCAAATGA

Upstream 100 bases:

>100_bases
AACATCTACAGGTAAAAAATGTTAAATAATTTATTTTCATTTAAATAAAAAATAACTATATATGATTGATATATAGATAC
GTATCATATATAGTTAAAGT

Downstream 100 bases:

>100_bases
ACTCATTATTTCTTTCTTACACGATTTTCAGAAAGGTTTAATAAACTTACCTGCATCAGCACGAGAACAACATGTGCTAG
AAATCAAATCCGATTTATAC

Product: PadR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 122; Mature: 122

Protein sequence:

>122_residues
MEKNDNFIIQLRKGVFDLAILSLISKQPMYGYEITSSLQAIPVFHIPNGSIYPILNRITKNHWAVSYWEESGDGPKRKYY
RITDEGREILHSRLHDYDAVYQALMLLAKGEDKNEQGTILCK

Sequences:

>Translated_122_residues
MEKNDNFIIQLRKGVFDLAILSLISKQPMYGYEITSSLQAIPVFHIPNGSIYPILNRITKNHWAVSYWEESGDGPKRKYY
RITDEGREILHSRLHDYDAVYQALMLLAKGEDKNEQGTILCK
>Mature_122_residues
MEKNDNFIIQLRKGVFDLAILSLISKQPMYGYEITSSLQAIPVFHIPNGSIYPILNRITKNHWAVSYWEESGDGPKRKYY
RITDEGREILHSRLHDYDAVYQALMLLAKGEDKNEQGTILCK

Specific function: Unknown

COG id: COG1695

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005149
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03551 PadR [H]

EC number: NA

Molecular weight: Translated: 14132; Mature: 14132

Theoretical pI: Translated: 7.66; Mature: 7.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKNDNFIIQLRKGVFDLAILSLISKQPMYGYEITSSLQAIPVFHIPNGSIYPILNRITK
CCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCHHCCCCCEEEEEECCCCCCHHHHHHHHC
NHWAVSYWEESGDGPKRKYYRITDEGREILHSRLHDYDAVYQALMLLAKGEDKNEQGTIL
CCEEEEEECCCCCCCCCEEEEECHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCEE
CK
EC
>Mature Secondary Structure
MEKNDNFIIQLRKGVFDLAILSLISKQPMYGYEITSSLQAIPVFHIPNGSIYPILNRITK
CCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCHHCCCCCEEEEEECCCCCCHHHHHHHHC
NHWAVSYWEESGDGPKRKYYRITDEGREILHSRLHDYDAVYQALMLLAKGEDKNEQGTIL
CCEEEEEECCCCCCCCCEEEEECHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCEE
CK
EC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]