Click here to switch to the map view.

The map label for this gene is ytqA [H]

Identifier: 52140755

GI number: 52140755

Start: 4596635

End: 4597594

Strand: Direct

Name: ytqA [H]

Synonym: BCZK4499

Alternate gene names: 52140755

Gene position: 4596635-4597594 (Clockwise)

Preceding gene: 52140767

Following gene: 52140754

Centisome position: 86.71

GC content: 39.69

Gene sequence:

>960_bases
ATGAAGGTTCAAAACCCTTTTCCATATACGAACGACAATAAACGTTATCATACATGGAATTACCATTTACGAAATGAATT
TGGTGAAAAAATCTTTAAAGTTTCATTAGATGCTGGCTTCGACTGCCCGAACCGTGACGGTACAGTTGCTTATGGCGGTT
GTACATTTTGCAGTGCTGCTGGATCTGGTGACTTCGCTGGCGATCGCCGCGATGATGTTATAACGCAATATCATGAAATG
AAAGAAAAAATGCGCTCAAAGTGGAAAGATGGAAAATGTATCGCTTATTTCCAGGCGTACACAAATACACATGCACCACT
TGAAGTGTTAAAAGAAAAATTCGAACCGCTTCTAGCTGAAAAAGACGTTGTTGGTCTTTCTATCGCGACTCGTCCAGATT
GTTTACCGGACGATGTCGTTGCATATTTAGCGGACTTAAATAAACGCACATACCTTTGGGTTGAACTCGGACTACAAACT
GTTCATGAACGTACTGCAAACCTTATTAATCGTGCTCACGATTATCCTTCTTATGTGGAAGGTGTAAATAAATTACGCAA
GCATGGCATTAGAGTTTGCTCTCATATTATTAACGGTCTTCCACTTGAAGATTACGACATGATGATGGAAACAGCTCGCG
AAGTAGCGAAGCTTGACGTACAAGGAATTAAAATTCATTTACTTCATTTATTAAAAGGAACGCCAATGGTGAAGCAATAT
GAAAAAGGACAACTAGAATTCCTTTCTCTTAAGGATTACGTAAGTCTCGTTGTTGACCAACTTGAAATGATTCCAGAAGA
CGTAATTGTGCACCGCATCACAGGTGACGGTCCACCTGATTTAATGATTGGTCCAATGTGGAGCTTAAATAAATGGGAAG
TATTAAATTCCATCGATGCAGAATTTGTACGCCGCGGAAGCTGGCAAGGAAAATATGCAAATGAGGAGAAACAAAAATGA

Upstream 100 bases:

>100_bases
CTTGCTTCAATTCCCCTTTAGTGTGTCCCTTCCATATGAACCTTATGAGTATGTTATAATGGATTTTGTTTCATTTTGAC
TCGGCTTAGGAGGGAAAGTA

Downstream 100 bases:

>100_bases
AATTAGAACGTGTATTACCGTTTGCTCGCACGCTTCTGCAAACGGCAGTAAAAGAAGGCGATTACGCTGTAGATGCAACT
TTAGGCAATGGGCATGACAC

Product: Fe-S oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MKVQNPFPYTNDNKRYHTWNYHLRNEFGEKIFKVSLDAGFDCPNRDGTVAYGGCTFCSAAGSGDFAGDRRDDVITQYHEM
KEKMRSKWKDGKCIAYFQAYTNTHAPLEVLKEKFEPLLAEKDVVGLSIATRPDCLPDDVVAYLADLNKRTYLWVELGLQT
VHERTANLINRAHDYPSYVEGVNKLRKHGIRVCSHIINGLPLEDYDMMMETAREVAKLDVQGIKIHLLHLLKGTPMVKQY
EKGQLEFLSLKDYVSLVVDQLEMIPEDVIVHRITGDGPPDLMIGPMWSLNKWEVLNSIDAEFVRRGSWQGKYANEEKQK

Sequences:

>Translated_319_residues
MKVQNPFPYTNDNKRYHTWNYHLRNEFGEKIFKVSLDAGFDCPNRDGTVAYGGCTFCSAAGSGDFAGDRRDDVITQYHEM
KEKMRSKWKDGKCIAYFQAYTNTHAPLEVLKEKFEPLLAEKDVVGLSIATRPDCLPDDVVAYLADLNKRTYLWVELGLQT
VHERTANLINRAHDYPSYVEGVNKLRKHGIRVCSHIINGLPLEDYDMMMETAREVAKLDVQGIKIHLLHLLKGTPMVKQY
EKGQLEFLSLKDYVSLVVDQLEMIPEDVIVHRITGDGPPDLMIGPMWSLNKWEVLNSIDAEFVRRGSWQGKYANEEKQK
>Mature_319_residues
MKVQNPFPYTNDNKRYHTWNYHLRNEFGEKIFKVSLDAGFDCPNRDGTVAYGGCTFCSAAGSGDFAGDRRDDVITQYHEM
KEKMRSKWKDGKCIAYFQAYTNTHAPLEVLKEKFEPLLAEKDVVGLSIATRPDCLPDDVVAYLADLNKRTYLWVELGLQT
VHERTANLINRAHDYPSYVEGVNKLRKHGIRVCSHIINGLPLEDYDMMMETAREVAKLDVQGIKIHLLHLLKGTPMVKQY
EKGQLEFLSLKDYVSLVVDQLEMIPEDVIVHRITGDGPPDLMIGPMWSLNKWEVLNSIDAEFVRRGSWQGKYANEEKQK

Specific function: Unknown

COG id: COG1242

COG function: function code R; Predicted Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the radical SAM superfamily [H]

Homologues:

Organism=Escherichia coli, GI2367204, Length=278, Percent_Identity=38.4892086330935, Blast_Score=226, Evalue=1e-60,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR005911
- InterPro:   IPR006638
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 36619; Mature: 36619

Theoretical pI: Translated: 6.58; Mature: 6.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVQNPFPYTNDNKRYHTWNYHLRNEFGEKIFKVSLDAGFDCPNRDGTVAYGGCTFCSAA
CCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHEEEECCCCCCCCCCCCCEEECCHHHCCCC
GSGDFAGDRRDDVITQYHEMKEKMRSKWKDGKCIAYFQAYTNTHAPLEVLKEKFEPLLAE
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHCCCCCHHHHHHHHHHHHHHC
KDVVGLSIATRPDCLPDDVVAYLADLNKRTYLWVELGLQTVHERTANLINRAHDYPSYVE
CCCEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCHHHHH
GVNKLRKHGIRVCSHIINGLPLEDYDMMMETAREVAKLDVQGIKIHLLHLLKGTPMVKQY
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
EKGQLEFLSLKDYVSLVVDQLEMIPEDVIVHRITGDGPPDLMIGPMWSLNKWEVLNSIDA
CCCCEEEEHHHHHHHHHHHHHHHCCHHHEEEEECCCCCCCCEECCCCCCCHHHHHHHHHH
EFVRRGSWQGKYANEEKQK
HHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKVQNPFPYTNDNKRYHTWNYHLRNEFGEKIFKVSLDAGFDCPNRDGTVAYGGCTFCSAA
CCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHEEEECCCCCCCCCCCCCEEECCHHHCCCC
GSGDFAGDRRDDVITQYHEMKEKMRSKWKDGKCIAYFQAYTNTHAPLEVLKEKFEPLLAE
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHCCCCCHHHHHHHHHHHHHHC
KDVVGLSIATRPDCLPDDVVAYLADLNKRTYLWVELGLQTVHERTANLINRAHDYPSYVE
CCCEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCHHHHH
GVNKLRKHGIRVCSHIINGLPLEDYDMMMETAREVAKLDVQGIKIHLLHLLKGTPMVKQY
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
EKGQLEFLSLKDYVSLVVDQLEMIPEDVIVHRITGDGPPDLMIGPMWSLNKWEVLNSIDA
CCCCEEEEHHHHHHHHHHHHHHHCCHHHEEEEECCCCCCCCEECCCCCCCHHHHHHHHHH
EFVRRGSWQGKYANEEKQK
HHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]