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The map label for this gene is ybbM [H]

Identifier: 52140583

GI number: 52140583

Start: 4777002

End: 4777799

Strand: Direct

Name: ybbM [H]

Synonym: BCZK4673

Alternate gene names: 52140583

Gene position: 4777002-4777799 (Clockwise)

Preceding gene: 52140586

Following gene: 52140580

Centisome position: 90.12

GC content: 39.47

Gene sequence:

>798_bases
TTGAAGGGCGTTATTGAACTCCAAATTTGGCAACTTGCCGCTGCATATATTTTCATTCTTATTTTAATTGGGCTTGTGAA
ATTAAAAGGAATACCTCGCGAAAAACAAATCGCGCTCGCAACATTCCGTATGACGATTCAGCTCGTACTTGTTGCCTATG
TCCTTACATACGTATTTGAAAACAGTAATCCATTTTATACAATTGCTCTCATTACTTCTATTACTACCTTTGCAATTTTT
AATATTTATAAACGAGTTAACATCCCTATGTCCAAAGAATTAAAACGAGTAGCCGCCCTTTCTATGGTAGCCGGATCCAT
TGGGCCACTTCTACTATTTATCTTTGTTATTATCGGACATGATCCTTGGTATGCACCGCAATATATCGTTCCGATTACCG
GAATGTTAGTCGGGAACGCCATGACTGGTGTTTCTCTCGGTGCAAATACGTTCTTAAACAATATGAAATCGCAAAGAGGT
CAAATTGAAGGAGCACTTATGCTTGGCGCAACGCCGAAAGAAGCCACTGCTCCGCTCATACGCGACGCTTTTGACTCTGC
CATTTTACCAACGATCAATTCTATGGTCGGAATGGGAATTATAAGCTTACCAGGCATGATGACAGGACAAATCTTATCTG
GTGTATCACCATTTACAGCCATTCAATATCAAATCGCAATTATACTTGGTATTTCAGGAAGTACCGCTTTTGCTGTTATT
ATCTTCTTGCAACTTGGATATAAGACCTTCTTTAATAAGCGGTGTCAGTTGAAAGAAATTGATTATGGCGGGTGGTAA

Upstream 100 bases:

>100_bases
ATCTTCATCACACACTCACAACAACTTCCAGAAGAAATTGCGGACGATATTATTGAGATTAGTAAAGCAAACGGTGCAAC
TAGAAAGGAAGTGCTCTCAG

Downstream 100 bases:

>100_bases
TCTGGTTTTTTGCTCGGTAAATGATGCACCTTTCTCGGTGAGTGAAATTATATCGGCGATTTTTGAAATATATCGATCGT
AACTTAAATTATATCGGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MKGVIELQIWQLAAAYIFILILIGLVKLKGIPREKQIALATFRMTIQLVLVAYVLTYVFENSNPFYTIALITSITTFAIF
NIYKRVNIPMSKELKRVAALSMVAGSIGPLLLFIFVIIGHDPWYAPQYIVPITGMLVGNAMTGVSLGANTFLNNMKSQRG
QIEGALMLGATPKEATAPLIRDAFDSAILPTINSMVGMGIISLPGMMTGQILSGVSPFTAIQYQIAIILGISGSTAFAVI
IFLQLGYKTFFNKRCQLKEIDYGGW

Sequences:

>Translated_265_residues
MKGVIELQIWQLAAAYIFILILIGLVKLKGIPREKQIALATFRMTIQLVLVAYVLTYVFENSNPFYTIALITSITTFAIF
NIYKRVNIPMSKELKRVAALSMVAGSIGPLLLFIFVIIGHDPWYAPQYIVPITGMLVGNAMTGVSLGANTFLNNMKSQRG
QIEGALMLGATPKEATAPLIRDAFDSAILPTINSMVGMGIISLPGMMTGQILSGVSPFTAIQYQIAIILGISGSTAFAVI
IFLQLGYKTFFNKRCQLKEIDYGGW
>Mature_265_residues
MKGVIELQIWQLAAAYIFILILIGLVKLKGIPREKQIALATFRMTIQLVLVAYVLTYVFENSNPFYTIALITSITTFAIF
NIYKRVNIPMSKELKRVAALSMVAGSIGPLLLFIFVIIGHDPWYAPQYIVPITGMLVGNAMTGVSLGANTFLNNMKSQRG
QIEGALMLGATPKEATAPLIRDAFDSAILPTINSMVGMGIISLPGMMTGQILSGVSPFTAIQYQIAIILGISGSTAFAVI
IFLQLGYKTFFNKRCQLKEIDYGGW

Specific function: Unknown

COG id: COG0390

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0014 family [H]

Homologues:

Organism=Escherichia coli, GI87081746, Length=246, Percent_Identity=34.9593495934959, Blast_Score=149, Evalue=3e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005226 [H]

Pfam domain/function: PF03649 UPF0014 [H]

EC number: NA

Molecular weight: Translated: 28968; Mature: 28968

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGVIELQIWQLAAAYIFILILIGLVKLKGIPREKQIALATFRMTIQLVLVAYVLTYVFE
CCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
NSNPFYTIALITSITTFAIFNIYKRVNIPMSKELKRVAALSMVAGSIGPLLLFIFVIIGH
CCCCEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCC
DPWYAPQYIVPITGMLVGNAMTGVSLGANTFLNNMKSQRGQIEGALMLGATPKEATAPLI
CCCCCCEEEHHHHHHHHHCHHHCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHH
RDAFDSAILPTINSMVGMGIISLPGMMTGQILSGVSPFTAIQYQIAIILGISGSTAFAVI
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHEEEEEEEEEECCCHHHHHH
IFLQLGYKTFFNKRCQLKEIDYGGW
HHHHHHHHHHHCCCCCEEECCCCCC
>Mature Secondary Structure
MKGVIELQIWQLAAAYIFILILIGLVKLKGIPREKQIALATFRMTIQLVLVAYVLTYVFE
CCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
NSNPFYTIALITSITTFAIFNIYKRVNIPMSKELKRVAALSMVAGSIGPLLLFIFVIIGH
CCCCEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCC
DPWYAPQYIVPITGMLVGNAMTGVSLGANTFLNNMKSQRGQIEGALMLGATPKEATAPLI
CCCCCCEEEHHHHHHHHHCHHHCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHH
RDAFDSAILPTINSMVGMGIISLPGMMTGQILSGVSPFTAIQYQIAIILGISGSTAFAVI
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHEEEEEEEEEECCCHHHHHH
IFLQLGYKTFFNKRCQLKEIDYGGW
HHHHHHHHHHHCCCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]