Click here to switch to the map view.

The map label for this gene is marR [C]

Identifier: 52140447

GI number: 52140447

Start: 4903144

End: 4903575

Strand: Reverse

Name: marR [C]

Synonym: BCZK4810

Alternate gene names: 52140447

Gene position: 4903575-4903144 (Counterclockwise)

Preceding gene: 52140448

Following gene: 52140451

Centisome position: 92.5

GC content: 32.41

Gene sequence:

>432_bases
ATGAAAAATAAAAATATAGCTGAGGAAATCAATCTAACACTTGAAGAATTATGGATATTACTTGAAGCGAAAGAAAGGTC
CTATACAAATTTCAATTTAAATAATCAGCAATATACGTTATTAACATTAATTATTCGGTACCCATCATCCACTCCTAAAG
AGTTAGCAGAAAAAATGAATGTAACGAAGAGTGCCATTAGCCAACAGTTAGTCAAACTTGAAAAGGATGGATACATTTTC
AGAAGGCAACATGCAGAAGATAAACGTGCATTTTCAGTTGAATTAGGGGAGAAAGGCTTGTTATACAAAAAAGAAATGGA
TGCATATATGGAGCAAGTTTCTGAAAAGTATTATGCAAGTTTATCATCTGAAGAATTAACAAACCTTTTATCAGCGCTTC
AAAAGCTAACGAAAGTAATTGGAGAGCTGTAG

Upstream 100 bases:

>100_bases
TTCTTGATAGGTGCTGTCTTTGTTGGGAAAGAAGTGGTGGCAAAATATAAAAGGTATTTAAACCCGAAAAATTGGAGAAG
AAAAGGTGAGAGAGACAAGT

Downstream 100 bases:

>100_bases
TAGTTATTACATGTATAAAAAGAAGCATAAGCTGACCAAAACGGTCAGCTTATGCTTCTTCATGTTCTAAATATCAAATG
TAGATTTTTAATCAAACAAA

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator MarR Family

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MKNKNIAEEINLTLEELWILLEAKERSYTNFNLNNQQYTLLTLIIRYPSSTPKELAEKMNVTKSAISQQLVKLEKDGYIF
RRQHAEDKRAFSVELGEKGLLYKKEMDAYMEQVSEKYYASLSSEELTNLLSALQKLTKVIGEL

Sequences:

>Translated_143_residues
MKNKNIAEEINLTLEELWILLEAKERSYTNFNLNNQQYTLLTLIIRYPSSTPKELAEKMNVTKSAISQQLVKLEKDGYIF
RRQHAEDKRAFSVELGEKGLLYKKEMDAYMEQVSEKYYASLSSEELTNLLSALQKLTKVIGEL
>Mature_143_residues
MKNKNIAEEINLTLEELWILLEAKERSYTNFNLNNQQYTLLTLIIRYPSSTPKELAEKMNVTKSAISQQLVKLEKDGYIF
RRQHAEDKRAFSVELGEKGLLYKKEMDAYMEQVSEKYYASLSSEELTNLLSALQKLTKVIGEL

Specific function: Transcription Factor That Activates Expression Of Genes Such As Molecular Chaperones (Grol, Gros, Dnak, Grpe, And Cbpa), Proteins Involved In Acid Resistance (Hdea, Hdeb, And Gada), The Starvation Lipoprotein Slp, Virulence Protein Hlye/Clya. Represses Ex

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16629; Mature: 16629

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNKNIAEEINLTLEELWILLEAKERSYTNFNLNNQQYTLLTLIIRYPSSTPKELAEKMN
CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHH
VTKSAISQQLVKLEKDGYIFRRQHAEDKRAFSVELGEKGLLYKKEMDAYMEQVSEKYYAS
HHHHHHHHHHHHHHCCCCHHHHHCCCCHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHC
LSSEELTNLLSALQKLTKVIGEL
CCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKNKNIAEEINLTLEELWILLEAKERSYTNFNLNNQQYTLLTLIIRYPSSTPKELAEKMN
CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHH
VTKSAISQQLVKLEKDGYIFRRQHAEDKRAFSVELGEKGLLYKKEMDAYMEQVSEKYYAS
HHHHHHHHHHHHHHCCCCHHHHHCCCCHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHC
LSSEELTNLLSALQKLTKVIGEL
CCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA