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The map label for this gene is whiA

Identifier: 52140413

GI number: 52140413

Start: 4935326

End: 4936231

Strand: Reverse

Name: whiA

Synonym: BCZK4846

Alternate gene names: 52140413

Gene position: 4936231-4935326 (Counterclockwise)

Preceding gene: 52140410

Following gene: 52140412

Centisome position: 93.12

GC content: 35.1

Gene sequence:

>906_bases
ATGAAGGAATGCTGTGAGAAAGCAGAATTATCAGCGTTACTTCGCATGAACGGATCGCTTTCTTTTTCAAACCGTCGTCT
ATCAATCGATATTCAAACGGAAAATGCGGCAATTGCAAGAAGGATTTATACGCTTTTGAAAAAAGGATATGACGTGACGG
TAGAATTACTTGTTCGTAAAAAAATGCGATTGAAGAAAAATAATGTATATATCGTAAGGCTTGTCGAGAAGTCTCGCGAA
ATATTAGCTGATCTTCATATCGTTCGAGATGACTTTTCATTTATTCGAAATATATCACAAGAATTAATTGAGAAGAAATG
TTGTAAACGATCGTATTTACGCGGTGCATTTTTAGCAGGTGGTTCAGTAAATAACCCAGAAACATCATCTTATCATTTAG
AGATCTTTTCGTTATATAAGGAACATAATGATGCTATATGTGAACTGATGAACGGATTTGATTTAAATAGTAAGACGTTG
GAAAGAAGAAAAGGGTACATTACGTATTTGAAAGAAGCAGAAAAGATAACAGAGTTTTTAAATATTATAGGTGCTCATAA
TGCACTGTTAAGATTTGAAGACATTCGAATCGTACGTGATATGCGTAATTCTGTAAATCGTTTAGTGAATTGCGAAACAG
CTAATTTAAATAAAACAATTGGTGCAGCGCTAAGGCAGATTGAAAATATCCGCTATATTGATGAGACGGTTGGTCTTGAT
ATATTGCCGGATAAACTACGCGAAATTGCGCAATTACGAAGAGATTATCAAGATGTAACATTGAAAGAGTTAGGTGAGAT
GGTATCCGGGGGGAAAATTAGTAAATCGGGTATTAATCATCGTTTGCGTAAAATCGATGATATTGCAGAGAAATTACGCG
CGGGGGAAACGGTAGCAAAAAAATAA

Upstream 100 bases:

>100_bases
TTTCATATAGGACAAGATTTTTGTTCCACAATAATCGTATAAGGAGGTGTTGGCTGTGTCATTTGCATCAGAAACAAAGA
AAGAGTTGACGAATCTAGAG

Downstream 100 bases:

>100_bases
GAGGTTAAAGGGGAAATGGAGCTGTGGTTCAAAAAAGAGTTCAGGTTTCATTAAAAAACGGTTTACAAGCACGTCCGGCT
GCGTTGTTTGTACAAGAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MKECCEKAELSALLRMNGSLSFSNRRLSIDIQTENAAIARRIYTLLKKGYDVTVELLVRKKMRLKKNNVYIVRLVEKSRE
ILADLHIVRDDFSFIRNISQELIEKKCCKRSYLRGAFLAGGSVNNPETSSYHLEIFSLYKEHNDAICELMNGFDLNSKTL
ERRKGYITYLKEAEKITEFLNIIGAHNALLRFEDIRIVRDMRNSVNRLVNCETANLNKTIGAALRQIENIRYIDETVGLD
ILPDKLREIAQLRRDYQDVTLKELGEMVSGGKISKSGINHRLRKIDDIAEKLRAGETVAKK

Sequences:

>Translated_301_residues
MKECCEKAELSALLRMNGSLSFSNRRLSIDIQTENAAIARRIYTLLKKGYDVTVELLVRKKMRLKKNNVYIVRLVEKSRE
ILADLHIVRDDFSFIRNISQELIEKKCCKRSYLRGAFLAGGSVNNPETSSYHLEIFSLYKEHNDAICELMNGFDLNSKTL
ERRKGYITYLKEAEKITEFLNIIGAHNALLRFEDIRIVRDMRNSVNRLVNCETANLNKTIGAALRQIENIRYIDETVGLD
ILPDKLREIAQLRRDYQDVTLKELGEMVSGGKISKSGINHRLRKIDDIAEKLRAGETVAKK
>Mature_301_residues
MKECCEKAELSALLRMNGSLSFSNRRLSIDIQTENAAIARRIYTLLKKGYDVTVELLVRKKMRLKKNNVYIVRLVEKSRE
ILADLHIVRDDFSFIRNISQELIEKKCCKRSYLRGAFLAGGSVNNPETSSYHLEIFSLYKEHNDAICELMNGFDLNSKTL
ERRKGYITYLKEAEKITEFLNIIGAHNALLRFEDIRIVRDMRNSVNRLVNCETANLNKTIGAALRQIENIRYIDETVGLD
ILPDKLREIAQLRRDYQDVTLKELGEMVSGGKISKSGINHRLRKIDDIAEKLRAGETVAKK

Specific function: May be required for sporulation

COG id: COG1481

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the whiA transcriptional regulatory family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): WHIA_BACAH (A0RKU0)

Other databases:

- EMBL:   CP000485
- RefSeq:   YP_897340.1
- STRING:   A0RKU0
- EnsemblBacteria:   EBBACT00000069504
- GeneID:   4542893
- GenomeReviews:   CP000485_GR
- KEGG:   btl:BALH_4644
- eggNOG:   COG1481
- GeneTree:   EBGT00050000002306
- HOGENOM:   HBG485718
- ProtClustDB:   CLSK873646
- BioCyc:   BTHU412694:BALH_4644-MONOMER
- GO:   GO:0006350
- HAMAP:   MF_01420
- InterPro:   IPR003802
- InterPro:   IPR023054
- InterPro:   IPR018478
- TIGRFAMs:   TIGR00647

Pfam domain/function: PF02650 HTH_WhiA; PF10298 WhiA_N

EC number: NA

Molecular weight: Translated: 34657; Mature: 34657

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKECCEKAELSALLRMNGSLSFSNRRLSIDIQTENAAIARRIYTLLKKGYDVTVELLVRK
CCHHHHHHHHHHHHHHCCCEEECCCEEEEEEECCHHHHHHHHHHHHHCCCCHHHHHHHHH
KMRLKKNNVYIVRLVEKSREILADLHIVRDDFSFIRNISQELIEKKCCKRSYLRGAFLAG
HHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GSVNNPETSSYHLEIFSLYKEHNDAICELMNGFDLNSKTLERRKGYITYLKEAEKITEFL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHHH
NIIGAHNALLRFEDIRIVRDMRNSVNRLVNCETANLNKTIGAALRQIENIRYIDETVGLD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
ILPDKLREIAQLRRDYQDVTLKELGEMVSGGKISKSGINHRLRKIDDIAEKLRAGETVAK
CCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHCC
K
C
>Mature Secondary Structure
MKECCEKAELSALLRMNGSLSFSNRRLSIDIQTENAAIARRIYTLLKKGYDVTVELLVRK
CCHHHHHHHHHHHHHHCCCEEECCCEEEEEEECCHHHHHHHHHHHHHCCCCHHHHHHHHH
KMRLKKNNVYIVRLVEKSREILADLHIVRDDFSFIRNISQELIEKKCCKRSYLRGAFLAG
HHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GSVNNPETSSYHLEIFSLYKEHNDAICELMNGFDLNSKTLERRKGYITYLKEAEKITEFL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHHH
NIIGAHNALLRFEDIRIVRDMRNSVNRLVNCETANLNKTIGAALRQIENIRYIDETVGLD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
ILPDKLREIAQLRRDYQDVTLKELGEMVSGGKISKSGINHRLRKIDDIAEKLRAGETVAK
CCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHCC
K
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA