| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51894463
Identifier: 51894463
GI number: 51894463
Start: 3553817
End: 3554317
Strand: Reverse
Name: 51894463
Synonym: STH3329
Alternate gene names: NA
Gene position: 3554317-3553817 (Counterclockwise)
Preceding gene: 51894466
Following gene: 51894462
Centisome position: 99.67
GC content: 64.27
Gene sequence:
>501_bases TTGGACACCGAACCCTTTTGCTCCTACAGAACTGGCTTACTCAGACAGGCTCCTAGCCCCGGGGCTCCAGTGGGAGATGT TCCACGTGGAACAACGCGGAAGGTGGTGGGACCTCAGGCGGAGAAGTATACTCGACCCGCGGTTATGCAAGGTACACGGA CGGGCAGTGACAGAACGCCCTCGGGTCTGATGCGGCGCTTTTCCACTGATGTTCCACGTGGAACACTGCCGCCTATTGAG CGGGCAGACATGCCACCGCAGCACCGGCCGGCACTGCTGGTCAAACGCCGTCAGGTGGCCCGGGTGACGCGGCACATGGT CCTTACCGTCAGGCACGACACGCCCCGAGGAAGGCGCTTCACTGGCATGGGGGATTGCCCCGATCTGGCGGACAACCGAC GCTCCGTGACGGGGAGGACCGGCACACTGCCTGCGCGCGGCCTTGCGAAAGCGCTTACCACCTGCCGCCTCCGTATGGCC CGGCGCAAGATGACGCCGTGA
Upstream 100 bases:
>100_bases GAAATGGTCATGCGGAAGCCAGTCCTGCAGGGCAGGGGGCAGCAGCAACAGCTGATTGGGCTCATACGGTCGATACGTCT TCTTGCTCATGCTGAAGACA
Downstream 100 bases:
>100_bases ACGACCTCAGCACCCCAAAGGATCTCAGGCGGGAGCATCGTCATGCATTGGTACGCCCGGCCCCAGTGTTCCACGTGGAA CACTTCGGCCCTGACCGTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 166; Mature: 166
Protein sequence:
>166_residues MDTEPFCSYRTGLLRQAPSPGAPVGDVPRGTTRKVVGPQAEKYTRPAVMQGTRTGSDRTPSGLMRRFSTDVPRGTLPPIE RADMPPQHRPALLVKRRQVARVTRHMVLTVRHDTPRGRRFTGMGDCPDLADNRRSVTGRTGTLPARGLAKALTTCRLRMA RRKMTP
Sequences:
>Translated_166_residues MDTEPFCSYRTGLLRQAPSPGAPVGDVPRGTTRKVVGPQAEKYTRPAVMQGTRTGSDRTPSGLMRRFSTDVPRGTLPPIE RADMPPQHRPALLVKRRQVARVTRHMVLTVRHDTPRGRRFTGMGDCPDLADNRRSVTGRTGTLPARGLAKALTTCRLRMA RRKMTP >Mature_166_residues MDTEPFCSYRTGLLRQAPSPGAPVGDVPRGTTRKVVGPQAEKYTRPAVMQGTRTGSDRTPSGLMRRFSTDVPRGTLPPIE RADMPPQHRPALLVKRRQVARVTRHMVLTVRHDTPRGRRFTGMGDCPDLADNRRSVTGRTGTLPARGLAKALTTCRLRMA RRKMTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18411; Mature: 18411
Theoretical pI: Translated: 12.26; Mature: 12.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTEPFCSYRTGLLRQAPSPGAPVGDVPRGTTRKVVGPQAEKYTRPAVMQGTRTGSDRTP CCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHCCCCCCCCCCH SGLMRRFSTDVPRGTLPPIERADMPPQHRPALLVKRRQVARVTRHMVLTVRHDTPRGRRF HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEECCCCCCCEE TGMGDCPDLADNRRSVTGRTGTLPARGLAKALTTCRLRMARRKMTP CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MDTEPFCSYRTGLLRQAPSPGAPVGDVPRGTTRKVVGPQAEKYTRPAVMQGTRTGSDRTP CCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHCCCCCCCCCCH SGLMRRFSTDVPRGTLPPIERADMPPQHRPALLVKRRQVARVTRHMVLTVRHDTPRGRRF HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEECCCCCCCEE TGMGDCPDLADNRRSVTGRTGTLPARGLAKALTTCRLRMARRKMTP CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA