Click here to switch to the map view.

The map label for this gene is 51894458

Identifier: 51894458

GI number: 51894458

Start: 3550214

End: 3550759

Strand: Reverse

Name: 51894458

Synonym: STH3324

Alternate gene names: NA

Gene position: 3550759-3550214 (Counterclockwise)

Preceding gene: 51894460

Following gene: 51894457

Centisome position: 99.57

GC content: 67.22

Gene sequence:

>546_bases
ATGGAACACGACGAGCGGTCAGCGATCCTGAAGGAGGCGGATGACCTGTACGCCAGGGGGAACCTGGAGGAGGCGCTGGA
GCGCTACCGGCGGGTCCTGGCGGAGGACGAGACCGTCGCCTGGGCCCACAGCCGCACCGGGGCCATCCTCGCCCAGCTGG
GCGACCTGGACGCGGCGGAGGTCCACCTGCGCCGCGCTATTGAGCTCGATCCAAAACTGCCCCAGGCGTACAGCAACCTC
GGGAATCTGGACTACTCCCGCGGGGCTTACGAAGCCGCCCTGGAGAAGTACAAGAAGGCCGTGGAACTGGACCCCGACAA
CCCCACCTTCTACGAGAACCTCCATGCGGCGTACAAGCGGCTCGGGAAGGTGTACGAGGCCGTGGAGGCGATCAAGAAGG
CCCAACGGCTGAAGCGATCCCAATTCCGGCAGGAGGCCGGGCAGGACATGGCCAACATGAGCGGGAGCCTCAAGCGCCGG
CTGGGCTGCCTGCCGACCGGCGTGCTGCTCGCGCTGGCCGTTCTGGGCCTGGCCATCTGCCTCTGA

Upstream 100 bases:

>100_bases
AGTCCCTTCCCTCCGACTCCGGTCCCTGGGACCGTGGTACAGGGAAGTATACTGCAATGCCTGGCAGCCTATGTGCAGCC
AGCAGCCACAGGAGGCGCTT

Downstream 100 bases:

>100_bases
GCCAACCTGCCGCCGGTCCGCTGCGGCGAAGGTAGGGATATCATGGACCTGAGTGCGATGAGCCCCCTGGATTGGGTGGT
GGTCGTCATCCTGCTCCTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MEHDERSAILKEADDLYARGNLEEALERYRRVLAEDETVAWAHSRTGAILAQLGDLDAAEVHLRRAIELDPKLPQAYSNL
GNLDYSRGAYEAALEKYKKAVELDPDNPTFYENLHAAYKRLGKVYEAVEAIKKAQRLKRSQFRQEAGQDMANMSGSLKRR
LGCLPTGVLLALAVLGLAICL

Sequences:

>Translated_181_residues
MEHDERSAILKEADDLYARGNLEEALERYRRVLAEDETVAWAHSRTGAILAQLGDLDAAEVHLRRAIELDPKLPQAYSNL
GNLDYSRGAYEAALEKYKKAVELDPDNPTFYENLHAAYKRLGKVYEAVEAIKKAQRLKRSQFRQEAGQDMANMSGSLKRR
LGCLPTGVLLALAVLGLAICL
>Mature_181_residues
MEHDERSAILKEADDLYARGNLEEALERYRRVLAEDETVAWAHSRTGAILAQLGDLDAAEVHLRRAIELDPKLPQAYSNL
GNLDYSRGAYEAALEKYKKAVELDPDNPTFYENLHAAYKRLGKVYEAVEAIKKAQRLKRSQFRQEAGQDMANMSGSLKRR
LGCLPTGVLLALAVLGLAICL

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI32307150, Length=120, Percent_Identity=34.1666666666667, Blast_Score=75, Evalue=2e-14,
Organism=Homo sapiens, GI32307148, Length=120, Percent_Identity=34.1666666666667, Blast_Score=75, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI115532690, Length=120, Percent_Identity=33.3333333333333, Blast_Score=70, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI115532692, Length=120, Percent_Identity=33.3333333333333, Blast_Score=70, Evalue=7e-13,
Organism=Drosophila melanogaster, GI17647755, Length=120, Percent_Identity=32.5, Blast_Score=68, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24585827, Length=120, Percent_Identity=32.5, Blast_Score=68, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24585829, Length=120, Percent_Identity=32.5, Blast_Score=68, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20243; Mature: 20243

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEHDERSAILKEADDLYARGNLEEALERYRRVLAEDETVAWAHSRTGAILAQLGDLDAAE
CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHH
VHLRRAIELDPKLPQAYSNLGNLDYSRGAYEAALEKYKKAVELDPDNPTFYENLHAAYKR
HHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
LGKVYEAVEAIKKAQRLKRSQFRQEAGQDMANMSGSLKRRLGCLPTGVLLALAVLGLAIC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
L
C
>Mature Secondary Structure
MEHDERSAILKEADDLYARGNLEEALERYRRVLAEDETVAWAHSRTGAILAQLGDLDAAE
CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHH
VHLRRAIELDPKLPQAYSNLGNLDYSRGAYEAALEKYKKAVELDPDNPTFYENLHAAYKR
HHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
LGKVYEAVEAIKKAQRLKRSQFRQEAGQDMANMSGSLKRRLGCLPTGVLLALAVLGLAIC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
L
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA