| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51894452
Identifier: 51894452
GI number: 51894452
Start: 3546975
End: 3548027
Strand: Reverse
Name: 51894452
Synonym: STH3318
Alternate gene names: NA
Gene position: 3548027-3546975 (Counterclockwise)
Preceding gene: 161899036
Following gene: 51894451
Centisome position: 99.49
GC content: 68.0
Gene sequence:
>1053_bases ATGGAAAGCCGATCGACGCGCGTGCAGGGACTGGTCTTCGGCGGTCTGATGGCGGCCATGACGGTCGTCTTCAGCCTGGT GCCGGGCCTCTCCGTGCTGATGCCGATCCCGCTGGTGCTGGCCTACGTCCGGTACGGCGGCCGCATCGCCGTCATGACCG CGACCGCAGCCACGCTGTTCACCATGGCGTTCACAGGCGTGGTCTCGGCCATCCTGGCCATCCCGGCCGGCATCTTGCCC GGTCTCGTCTTCGGCATGGGCTTCCGGCGCAAGTGGAAGCCGCTCACCATCGGCCTCGCGGCCGTTCTCACCTTCTTCTT GGGGTTCGCTCTGGAGTACGCGGTCACCCGCGTGGTCATGTTCGACGGGCGCGACCCCTTCGTCGCCATGCTGGAGACCC CCGCCGTGCAGAACCAGGTGGAGATGATGGCGGGAGTGATGGAGCAGACAGCGGCGATGATCGAGTCCGCCGCGGCGGAC GGCGCCGCCACCACCGCGCAGCAGCAGATGGCCCAGCAGTACCGGGACATGGCCGACCTGCTGCGCCGGGATGCGGTGGG CCTGGTCTGGACCCTGCTGCCGGCCTCGCTGTTCTTCGCCGGTGCGTTCAGCAGCTGGTTCAACTACATGCTCTGCAGGC TCATCCTCCCGCGCTTTGGCCACCCACTGCCTCCGTCGACCCCGTTCGCCGAGTTCCGGCTGCCGATCTGGGTTATCTGG GCCTACGCGCTCATCTCCCTGGCGGTGCCGCTGCTCGCCGGCGGAGACATGACGGCGCTGCCCTGGTGGGGCAAGCTGCT GCTCAACGTCTTTACGCCGCTCATGTTCATCCTCGTGCTGGCGGGGCTGGCTGTGGCTTACGGGTGGATGCGGAGGCGCG GGCTGGCGAAGGGCCTGGCCGTGCTGATCCTTGCCGTCGCGTTCCTGCTCCTCGGGCAGCTGGGGATGCAGCTGCTGGTG CTGCTGGCCATGTGGGACACGGTGTTTGACGTGCGCGGCCTGGGGCACGGCCTGTGGAAGCGAACGGAGGAGACCCGTCA ACGGGAGGGATAG
Upstream 100 bases:
>100_bases ACCGTCGAGTAGACGGCCCGCGCAACGCAAAGAGGGGGGCACCGCGTCCGGCGGGCCCCCCTGTTCGCTCACCGATCACC TGCCCGAAGGAGCATACCGC
Downstream 100 bases:
>100_bases GCATGAAGGTGATCCTGAAGGCCGACGTCAAGGGGACCGGGAAAAAGGGACAGACCGTCGAGGTCGCGGACGGGTACGCG CGCAACTACCTGATTCCCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 350; Mature: 350
Protein sequence:
>350_residues MESRSTRVQGLVFGGLMAAMTVVFSLVPGLSVLMPIPLVLAYVRYGGRIAVMTATAATLFTMAFTGVVSAILAIPAGILP GLVFGMGFRRKWKPLTIGLAAVLTFFLGFALEYAVTRVVMFDGRDPFVAMLETPAVQNQVEMMAGVMEQTAAMIESAAAD GAATTAQQQMAQQYRDMADLLRRDAVGLVWTLLPASLFFAGAFSSWFNYMLCRLILPRFGHPLPPSTPFAEFRLPIWVIW AYALISLAVPLLAGGDMTALPWWGKLLLNVFTPLMFILVLAGLAVAYGWMRRRGLAKGLAVLILAVAFLLLGQLGMQLLV LLAMWDTVFDVRGLGHGLWKRTEETRQREG
Sequences:
>Translated_350_residues MESRSTRVQGLVFGGLMAAMTVVFSLVPGLSVLMPIPLVLAYVRYGGRIAVMTATAATLFTMAFTGVVSAILAIPAGILP GLVFGMGFRRKWKPLTIGLAAVLTFFLGFALEYAVTRVVMFDGRDPFVAMLETPAVQNQVEMMAGVMEQTAAMIESAAAD GAATTAQQQMAQQYRDMADLLRRDAVGLVWTLLPASLFFAGAFSSWFNYMLCRLILPRFGHPLPPSTPFAEFRLPIWVIW AYALISLAVPLLAGGDMTALPWWGKLLLNVFTPLMFILVLAGLAVAYGWMRRRGLAKGLAVLILAVAFLLLGQLGMQLLV LLAMWDTVFDVRGLGHGLWKRTEETRQREG >Mature_350_residues MESRSTRVQGLVFGGLMAAMTVVFSLVPGLSVLMPIPLVLAYVRYGGRIAVMTATAATLFTMAFTGVVSAILAIPAGILP GLVFGMGFRRKWKPLTIGLAAVLTFFLGFALEYAVTRVVMFDGRDPFVAMLETPAVQNQVEMMAGVMEQTAAMIESAAAD GAATTAQQQMAQQYRDMADLLRRDAVGLVWTLLPASLFFAGAFSSWFNYMLCRLILPRFGHPLPPSTPFAEFRLPIWVIW AYALISLAVPLLAGGDMTALPWWGKLLLNVFTPLMFILVLAGLAVAYGWMRRRGLAKGLAVLILAVAFLLLGQLGMQLLV LLAMWDTVFDVRGLGHGLWKRTEETRQREG
Specific function: Unknown
COG id: COG4241
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38199; Mature: 38199
Theoretical pI: Translated: 10.21; Mature: 10.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 6.0 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 6.0 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESRSTRVQGLVFGGLMAAMTVVFSLVPGLSVLMPIPLVLAYVRYGGRIAVMTATAATLF CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHH TMAFTGVVSAILAIPAGILPGLVFGMGFRRKWKPLTIGLAAVLTFFLGFALEYAVTRVVM HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH FDGRDPFVAMLETPAVQNQVEMMAGVMEQTAAMIESAAADGAATTAQQQMAQQYRDMADL CCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH LRRDAVGLVWTLLPASLFFAGAFSSWFNYMLCRLILPRFGHPLPPSTPFAEFRLPIWVIW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH AYALISLAVPLLAGGDMTALPWWGKLLLNVFTPLMFILVLAGLAVAYGWMRRRGLAKGLA HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLILAVAFLLLGQLGMQLLVLLAMWDTVFDVRGLGHGLWKRTEETRQREG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCC >Mature Secondary Structure MESRSTRVQGLVFGGLMAAMTVVFSLVPGLSVLMPIPLVLAYVRYGGRIAVMTATAATLF CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHH TMAFTGVVSAILAIPAGILPGLVFGMGFRRKWKPLTIGLAAVLTFFLGFALEYAVTRVVM HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH FDGRDPFVAMLETPAVQNQVEMMAGVMEQTAAMIESAAADGAATTAQQQMAQQYRDMADL CCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH LRRDAVGLVWTLLPASLFFAGAFSSWFNYMLCRLILPRFGHPLPPSTPFAEFRLPIWVIW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH AYALISLAVPLLAGGDMTALPWWGKLLLNVFTPLMFILVLAGLAVAYGWMRRRGLAKGLA HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLILAVAFLLLGQLGMQLLVLLAMWDTVFDVRGLGHGLWKRTEETRQREG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA