| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is yojG [H]
Identifier: 51894418
GI number: 51894418
Start: 3509250
End: 3509903
Strand: Reverse
Name: yojG [H]
Synonym: STH3284
Alternate gene names: 51894418
Gene position: 3509903-3509250 (Counterclockwise)
Preceding gene: 51894419
Following gene: 51894417
Centisome position: 98.42
GC content: 69.72
Gene sequence:
>654_bases GTGAAAGAGCACGTGCTGGTCATCATGCCGCATCCCGACGACGAGACCTTTGCGGTGGGCGGCACCATCGCCCTGTACGC CCAGCGGGGGGTACCCGTCACCTACGTGTGCGGCACCCGGGGCGAGATGGGCCGGCGCATGGGCCGGCCGCCGTTTGCCA CGCGCGAGAGCCTGCCCGGGCTGCGGGAGAAGGAGCTCAGGGAGGCGTGCCGCATCCTGGGCATCACCGACCTGCGCTTC CTCGGGCTGTGGGACAAGACCGTGGAGTTCGAGGACCCCGAGGCCCTGGCTGCGCGCCTGAAGGCCATCATCGAGGAGAT CCGGCCCTCCTTGATTATCACCTACCACCCCGACTACAGCGTCCACCCCGACCACATGGCCCTGGGCCGGGCGACGGTGC GGGCCGTGGCCCAGCTGCCCCCGGACCGGCGTCCGCCGGTGCACACCCGCGCTTTCGGCAAGGCGTCCGCAGTCCTGGGA GAGCCGGACCTGGTTGTGGACGTGCGGCCGGTCTGGGAGACCAAGTTGGCGGCTATCCGGGCCCACCGTTCCCAGAGCGC GCTGGTGCTTGCGGATGACGACCCGGAGGCGCAGGAGCGGCTGCGCCGGGACCGGACACAGGAAGCCTACTACGTGTGGA AATTCAAGGACTAG
Upstream 100 bases:
>100_bases GGCCGGCTGCTGTTGGCCGGCCACGACGCCAACGGCTGTCTGGCCATCGCTCTGGAGCTGAGCCATACGCCGTTCCCGAT GAAGTAGGAGGTCACGGGCC
Downstream 100 bases:
>100_bases ACCTCGTACGCAACGGCCCCCGGATCTCCCCCGGGGGCCGTTTCTCTTGAGCCGGCGAGCCTCCCCCCTTCACGTGCATC CTGTCACAAAGAAGGAATTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 217; Mature: 217
Protein sequence:
>217_residues MKEHVLVIMPHPDDETFAVGGTIALYAQRGVPVTYVCGTRGEMGRRMGRPPFATRESLPGLREKELREACRILGITDLRF LGLWDKTVEFEDPEALAARLKAIIEEIRPSLIITYHPDYSVHPDHMALGRATVRAVAQLPPDRRPPVHTRAFGKASAVLG EPDLVVDVRPVWETKLAAIRAHRSQSALVLADDDPEAQERLRRDRTQEAYYVWKFKD
Sequences:
>Translated_217_residues MKEHVLVIMPHPDDETFAVGGTIALYAQRGVPVTYVCGTRGEMGRRMGRPPFATRESLPGLREKELREACRILGITDLRF LGLWDKTVEFEDPEALAARLKAIIEEIRPSLIITYHPDYSVHPDHMALGRATVRAVAQLPPDRRPPVHTRAFGKASAVLG EPDLVVDVRPVWETKLAAIRAHRSQSALVLADDDPEAQERLRRDRTQEAYYVWKFKD >Mature_217_residues MKEHVLVIMPHPDDETFAVGGTIALYAQRGVPVTYVCGTRGEMGRRMGRPPFATRESLPGLREKELREACRILGITDLRF LGLWDKTVEFEDPEALAARLKAIIEEIRPSLIITYHPDYSVHPDHMALGRATVRAVAQLPPDRRPPVHTRAFGKASAVLG EPDLVVDVRPVWETKLAAIRAHRSQSALVLADDDPEAQERLRRDRTQEAYYVWKFKD
Specific function: Unknown
COG id: COG2120
COG function: function code S; Uncharacterized proteins, LmbE homologs
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PIGL family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003737 [H]
Pfam domain/function: PF02585 PIG-L [H]
EC number: NA
Molecular weight: Translated: 24540; Mature: 24540
Theoretical pI: Translated: 7.70; Mature: 7.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEHVLVIMPHPDDETFAVGGTIALYAQRGVPVTYVCGTRGEMGRRMGRPPFATRESLPG CCCCEEEEEECCCCCEEEECCEEEEEEECCCCEEEEECCCHHHHHHCCCCCCCCHHHCCC LREKELREACRILGITDLRFLGLWDKTVEFEDPEALAARLKAIIEEIRPSLIITYHPDYS CCHHHHHHHHHHCCCCCHHEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCC VHPDHMALGRATVRAVAQLPPDRRPPVHTRAFGKASAVLGEPDLVVDVRPVWETKLAAIR CCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCHHHCCCCCCEEEEECCHHHHHHHHHH AHRSQSALVLADDDPEAQERLRRDRTQEAYYVWKFKD HCCCCCEEEEECCCHHHHHHHHHCCCCCEEEEEEECC >Mature Secondary Structure MKEHVLVIMPHPDDETFAVGGTIALYAQRGVPVTYVCGTRGEMGRRMGRPPFATRESLPG CCCCEEEEEECCCCCEEEECCEEEEEEECCCCEEEEECCCHHHHHHCCCCCCCCHHHCCC LREKELREACRILGITDLRFLGLWDKTVEFEDPEALAARLKAIIEEIRPSLIITYHPDYS CCHHHHHHHHHHCCCCCHHEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCC VHPDHMALGRATVRAVAQLPPDRRPPVHTRAFGKASAVLGEPDLVVDVRPVWETKLAAIR CCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCHHHCCCCCCEEEEECCHHHHHHHHHH AHRSQSALVLADDDPEAQERLRRDRTQEAYYVWKFKD HCCCCCEEEEECCCHHHHHHHHHCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9734814; 9384377 [H]