| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is crh [H]
Identifier: 51894414
GI number: 51894414
Start: 3505880
End: 3506146
Strand: Reverse
Name: crh [H]
Synonym: STH3280
Alternate gene names: 51894414
Gene position: 3506146-3505880 (Counterclockwise)
Preceding gene: 51894416
Following gene: 51894413
Centisome position: 98.32
GC content: 65.54
Gene sequence:
>267_bases ATGGTAGAAAGGACCTTTACCCTAAGCAACCCCACCGGACTGCATGCCAGGCCCGCCGCACTGTTCGTCAAGGAAGTGCA GAAGTTCGCCGACACGGAGATCTTCGTGCGCAAGGGCGAGAAGGAGGTCTCGGCCCGTTCCCTGCTCTCCCTCCTGAGCC TCGGCGTCGCCCAGGGGGAGACCATCGTCATCCGCTGCCAGGGGCCCCGGGAAGAGGAGGCCATGGCGGCGCTGGCCGCG CTGATTGAGGGTGGCCTCGGTGAGTGA
Upstream 100 bases:
>100_bases GCCGCAAAATGTACCGAATCCTTCTGGACAGCCGGGCCGCAATCCCGGATACTATTGTTAAACGCCTTTGCGGAAGTTAC CGAGGAGGAGTGTCCGCCGC
Downstream 100 bases:
>100_bases AAAGGTCCTGAACGGCGTCGCGGCCGCCGCGGGCGTCGTCATCGGTCCCGCGTTCGTCTACCGGGAGGGGCAGCCGGAGA CCGCGGCACGGGCGGCTGCT
Product: PTS system phosphocarrier protein Hpr
Products: D-sorbitol 6-phosphate [Cytoplasm]; pyruvate; alpha,alpha-trehalose 6-phosphate [Cytoplasm]; mannitol-1-phosphate [Cytoplasm]; D-glucosamine-6-phosphate [Cytoplasm]; N-acetyl-D-glucosamine-6-phosphate [Cytoplasm]; mannose-6-phosphate [Cytoplasm]; galactitol-1-phosphate [Cytoplasm]; fructose-6-phosphate [Cytoplasm]; fructose-1-phosphate [Cytoplasm]; glucose-6-phosphate [Cytoplasm]; mannitol-1-phosphate [Cytoplasm]; diacetylchitobiose-6-phosphate [Cytoplasm]; cellobiose-6-phosphate [Cytoplasm]; salicin-6-phosphate [Cytoplasm]; arbutin-6-phosphate [Cytoplasm] [C]
Alternate protein names: Catabolite repression HPr [H]
Number of amino acids: Translated: 88; Mature: 88
Protein sequence:
>88_residues MVERTFTLSNPTGLHARPAALFVKEVQKFADTEIFVRKGEKEVSARSLLSLLSLGVAQGETIVIRCQGPREEEAMAALAA LIEGGLGE
Sequences:
>Translated_88_residues MVERTFTLSNPTGLHARPAALFVKEVQKFADTEIFVRKGEKEVSARSLLSLLSLGVAQGETIVIRCQGPREEEAMAALAA LIEGGLGE >Mature_88_residues MVERTFTLSNPTGLHARPAALFVKEVQKFADTEIFVRKGEKEVSARSLLSLLSLGVAQGETIVIRCQGPREEEAMAALAA LIEGGLGE
Specific function: Involved in carbon catabolite repression (CCR) [H]
COG id: COG1925
COG function: function code G; Phosphotransferase system, HPr-related proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HPr domain [H]
Homologues:
Organism=Escherichia coli, GI1788755, Length=82, Percent_Identity=41.4634146341463, Blast_Score=65, Evalue=1e-12, Organism=Escherichia coli, GI1789599, Length=88, Percent_Identity=40.9090909090909, Blast_Score=64, Evalue=1e-12,
Paralogues:
None
Copy number: 4180 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 2100 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 3235 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005698 - InterPro: IPR000032 - InterPro: IPR002114 [H]
Pfam domain/function: PF00381 PTS-HPr [H]
EC number: NA
Molecular weight: Translated: 9455; Mature: 9455
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: PS00369 PTS_HPR_HIS ; PS00589 PTS_HPR_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVERTFTLSNPTGLHARPAALFVKEVQKFADTEIFVRKGEKEVSARSLLSLLSLGVAQGE CCCCEEECCCCCCCCCCHHHHHHHHHHHHHCCHHEEECCCHHHHHHHHHHHHHHCCCCCC TIVIRCQGPREEEAMAALAALIEGGLGE EEEEEECCCCHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MVERTFTLSNPTGLHARPAALFVKEVQKFADTEIFVRKGEKEVSARSLLSLLSLGVAQGE CCCCEEECCCCCCCCCCHHHHHHHHHHHHHCCHHEEECCCHHHHHHHHHHHHHHCCCCCC TIVIRCQGPREEEAMAALAALIEGGLGE EEEEEECCCCHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: sorbitol [Periplasm]; phosphoenolpyruvate; trehalose [Periplasm]; mannitol [Periplasm]; glucosamine [Periplasm]; N-acetyl-D-glucosamine [Periplasm]; mannose [Periplasm]; galactitol [Periplasm]; fructose [Periplasm]; beta-D-glucose [Periplasm]; diacetylchitobiose [Periplasm]; cellobiose [Periplasm]; salicin [Periplasm]; arbutin [Periplasm] [C]
Specific reaction: phosphoenolpyruvate + sorbitol [Periplasm] = D-sorbitol 6-phosphate [Cytoplasm] + pyruvate phosphoenolpyruvate + trehalose [Periplasm] = alpha,alpha-trehalose 6-phosphate [Cytoplasm] + pyruvate phosphoenolpyruvate + mannitol [Periplasm] = mannitol-1-phosp
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11058132 [H]