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The map label for this gene is ydaV [C]

Identifier: 51894395

GI number: 51894395

Start: 3479451

End: 3480476

Strand: Reverse

Name: ydaV [C]

Synonym: STH3260

Alternate gene names: 51894395

Gene position: 3480476-3479451 (Counterclockwise)

Preceding gene: 51894396

Following gene: 51894394

Centisome position: 97.6

GC content: 68.23

Gene sequence:

>1026_bases
ATGATAGCTACTATGAGGTCGTCTTTAAGCGATTTGACGATTGAGCGGGCCAAGCGCCGGGAGGCCCGCATCCGGCAGCT
GGTGCAGGAGCGGGACGAGCGGGAGGCGGCCATCTTCGCGCGCATCCCCCGGCTGGCGGAGATCAAGGCGCTGCAGGCGG
AGATCGGCCTGGACCTGGCCCGGCTCTACCTGAAGCGGCCGACCCGCTTCAAGATGACCTTTGAGGAGCTCCGGGACTGG
TCGCTCCGGCTGTCCCGGGAACGGGAGGAGCTGCTCCGGCAGCACGGCATCGATCCCCGGGAGCTGGAGGTGCACTGGGA
CTGCCCCAAGTGCCAGAACACCGGCTGGATCCGGGACACCGAGGCCGGCGAGACGGTCGCGCCCCCCCGCAAGTGCAGCT
GCCTCATCCAGGAGGAGATCGAGGACCTCTACCGGGTGGCGGGGCTGACGGGTCCGCTCCGGGAGCATACCTTCGACCGG
TTTGACCTCACGGTGTACCCTGCGGAGTGCCGCAAACACATGGCGGGGGTGCGCGACTACTGCCGCCGCTTCGCCGAGGC
GGTGGCCGAGGGGCGGTGCCGGACCTCTCTGCTCCTGCAGGGGGCCGTGGGGCTGGGGAAGACCTTCCTGGCCTCGGCCA
TCGGCAACTACGTCATCGCCGCCCGCCGCAGCGTGCTCTACTTCACGCTGGCGGAGTTCGTCGACCTCATTCGCGCGGAG
AAGTTTGAAGACGGGGAGGACGCCAGGGCCTCCGCCCAGTGGCTGCTGGAGGCCGACCTGGTCATCCTGGACGACCTGGG
CGCCGAGAAGGTGACGGAGTTCGTGGCCCAGGAGCTGTTCAACCTCATCAACCTGCGGCTGAACCGGCAGATGCCCATGG
TGGTTTCGACCAACCTGCGCGCCAGCGAGCTGTTCGACACCTACGGGGAGCGTATCGCCTCGCGGCTGCTCTACGGGTTT
GAGGCGCTCACGCTGGAGGGAGAGGACGTGCGGCGGGTGCTGCGCCTGCGGGCGGGGGAACGGTGA

Upstream 100 bases:

>100_bases
CGGAAGGCCGCGGCCGCCGGGTTGGATTCCGGCCGTTCCCCCCGCTCCGGCCGCAGGGGGTCCGGGCAGTCCAATGTGAT
CTTGAAGCGCGAGAAGAAGG

Downstream 100 bases:

>100_bases
ACGGAGGTGTACTGCGGCGCACCGTCGAATACAGCCGTGAGGAGGGTGGCCCGATGGCGGAGGAGCAGGCCCGGACGCCG
CTGTTTTCGGCGCTGAGGGA

Product: DNA replication protein DnaC

Products: NA

Alternate protein names: AAA ATPase; Replicative DNA Helicase; Aaa ATPase; DNA Replication; Replication Protein; Chromosomal Replication Initiator DNAa; Prophage; Chromosome Replication Initiation Protein; Aaa ATPase Central Domain Protein; Primosomal Protein DNAI; DNA Replication Protein; Chromosomal Replication Initiator DNAA

Number of amino acids: Translated: 341; Mature: 341

Protein sequence:

>341_residues
MIATMRSSLSDLTIERAKRREARIRQLVQERDEREAAIFARIPRLAEIKALQAEIGLDLARLYLKRPTRFKMTFEELRDW
SLRLSREREELLRQHGIDPRELEVHWDCPKCQNTGWIRDTEAGETVAPPRKCSCLIQEEIEDLYRVAGLTGPLREHTFDR
FDLTVYPAECRKHMAGVRDYCRRFAEAVAEGRCRTSLLLQGAVGLGKTFLASAIGNYVIAARRSVLYFTLAEFVDLIRAE
KFEDGEDARASAQWLLEADLVILDDLGAEKVTEFVAQELFNLINLRLNRQMPMVVSTNLRASELFDTYGERIASRLLYGF
EALTLEGEDVRRVLRLRAGER

Sequences:

>Translated_341_residues
MIATMRSSLSDLTIERAKRREARIRQLVQERDEREAAIFARIPRLAEIKALQAEIGLDLARLYLKRPTRFKMTFEELRDW
SLRLSREREELLRQHGIDPRELEVHWDCPKCQNTGWIRDTEAGETVAPPRKCSCLIQEEIEDLYRVAGLTGPLREHTFDR
FDLTVYPAECRKHMAGVRDYCRRFAEAVAEGRCRTSLLLQGAVGLGKTFLASAIGNYVIAARRSVLYFTLAEFVDLIRAE
KFEDGEDARASAQWLLEADLVILDDLGAEKVTEFVAQELFNLINLRLNRQMPMVVSTNLRASELFDTYGERIASRLLYGF
EALTLEGEDVRRVLRLRAGER
>Mature_341_residues
MIATMRSSLSDLTIERAKRREARIRQLVQERDEREAAIFARIPRLAEIKALQAEIGLDLARLYLKRPTRFKMTFEELRDW
SLRLSREREELLRQHGIDPRELEVHWDCPKCQNTGWIRDTEAGETVAPPRKCSCLIQEEIEDLYRVAGLTGPLREHTFDR
FDLTVYPAECRKHMAGVRDYCRRFAEAVAEGRCRTSLLLQGAVGLGKTFLASAIGNYVIAARRSVLYFTLAEFVDLIRAE
KFEDGEDARASAQWLLEADLVILDDLGAEKVTEFVAQELFNLINLRLNRQMPMVVSTNLRASELFDTYGERIASRLLYGF
EALTLEGEDVRRVLRLRAGER

Specific function: Unknown

COG id: COG1484

COG function: function code L; DNA replication protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39311; Mature: 39311

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIATMRSSLSDLTIERAKRREARIRQLVQERDEREAAIFARIPRLAEIKALQAEIGLDLA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
RLYLKRPTRFKMTFEELRDWSLRLSREREELLRQHGIDPRELEVHWDCPKCQNTGWIRDT
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCC
EAGETVAPPRKCSCLIQEEIEDLYRVAGLTGPLREHTFDRFDLTVYPAECRKHMAGVRDY
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCEEEEEHHHHHHHHHHHHHH
CRRFAEAVAEGRCRTSLLLQGAVGLGKTFLASAIGNYVIAARRSVLYFTLAEFVDLIRAE
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KFEDGEDARASAQWLLEADLVILDDLGAEKVTEFVAQELFNLINLRLNRQMPMVVSTNLR
CCCCCCHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCH
ASELFDTYGERIASRLLYGFEALTLEGEDVRRVLRLRAGER
HHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHCCCC
>Mature Secondary Structure
MIATMRSSLSDLTIERAKRREARIRQLVQERDEREAAIFARIPRLAEIKALQAEIGLDLA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
RLYLKRPTRFKMTFEELRDWSLRLSREREELLRQHGIDPRELEVHWDCPKCQNTGWIRDT
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCC
EAGETVAPPRKCSCLIQEEIEDLYRVAGLTGPLREHTFDRFDLTVYPAECRKHMAGVRDY
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCEEEEEHHHHHHHHHHHHHH
CRRFAEAVAEGRCRTSLLLQGAVGLGKTFLASAIGNYVIAARRSVLYFTLAEFVDLIRAE
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KFEDGEDARASAQWLLEADLVILDDLGAEKVTEFVAQELFNLINLRLNRQMPMVVSTNLR
CCCCCCHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCH
ASELFDTYGERIASRLLYGFEALTLEGEDVRRVLRLRAGER
HHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA