Click here to switch to the map view.

The map label for this gene is yabE [H]

Identifier: 51894385

GI number: 51894385

Start: 3463392

End: 3464276

Strand: Reverse

Name: yabE [H]

Synonym: STH3250

Alternate gene names: 51894385

Gene position: 3464276-3463392 (Counterclockwise)

Preceding gene: 51894386

Following gene: 51894384

Centisome position: 97.14

GC content: 70.62

Gene sequence:

>885_bases
ATGCACCTGAAGTCTTTGCGAGGCCGAGCGCTGGCGATCGCCGCGGCCGCCGTACTGCTGGCGGGGGCGCTGGGCCAGCT
GGGCCGGCCCGCTCAGCACACGGTCACGACCGCCACCGAGTCCGCGCCGGCGGGCGAGGTCCTGGCAGCGGCCGCGACAG
TGCCTGTCATGCTGATCGACGGCGGCGAGCGCCGCACGGTGCAGACCGCCGCGCACACCGTCGGCGAGCTGCTGAAGGAG
CAACGGGTTACCCTGGGCGAGCTCGACTCGCTGTCGGTGCCCGAGAGCGCGGCCGTCACCGCGGGCCTGGAGGTGCGGAT
TGTCCGCCGGACCGAGGAGCTGGTGACGGAGGAAGAGGAGATCCCGTTTGACACGGTGGATCGGCCGGACGGCAGCCTGG
TCGTGGGCGCCGAAGAGGTCGTCCAGCCGGGCGCGCCCGGTCTGAAGCTGGTAGAGCGGCTGGTGCGCTACGAGGACGGC
GTTGTGGTGTCCAGCGAGGTCGTGACGGAGAGGGTCGTCCAGGAACCCACCCCGCAGATTGTGGCCTACGGTACGGGCGG
CGTGGTCTCCCGCGGCGGCGAGCGGTTCCGCTACACCGAGGTCCTGGAGATGGTCGCGACCGGCTATACCCCGGGACCGG
AGAGTAATCCGGGCGGCGTTGGGTTAACCTACACGGGCATTCCCGCGGCGCGCGGCATCGTGGCCGTCGACCCGCAGGTC
ATTCCGCTCTACACCCGCCTCTACATCGAAGGGTACGGTCCGGCCCTGGCCGCCGACACGGGCGGAGCGATCAAGGGAAA
CCGCATCGACCTCTGCTTCGACACCGTGGAGGAGGCGCTGGCCTGGGGCGTGCGGCCGGTCACGGTCTATGTCCTGGGAG
ACTGA

Upstream 100 bases:

>100_bases
CGGTGCAGAAGTTGCCAGCCGCCCCTGGGAGGCATAGAAAGGCCCCGGGGCGAACTATTATGGGAACTGCTGCACAAAGA
CCAGACGGGAGGGGGCGGGC

Downstream 100 bases:

>100_bases
ACACGGGCCAGGGGCCGTCGTCCGGCCCCTGGCTTCTTGCAATCCCTGGTAAGGAGACGATTCCATGGACTTGGCGAACC
CGGGCGCGCTGAAGGCGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MHLKSLRGRALAIAAAAVLLAGALGQLGRPAQHTVTTATESAPAGEVLAAAATVPVMLIDGGERRTVQTAAHTVGELLKE
QRVTLGELDSLSVPESAAVTAGLEVRIVRRTEELVTEEEEIPFDTVDRPDGSLVVGAEEVVQPGAPGLKLVERLVRYEDG
VVVSSEVVTERVVQEPTPQIVAYGTGGVVSRGGERFRYTEVLEMVATGYTPGPESNPGGVGLTYTGIPAARGIVAVDPQV
IPLYTRLYIEGYGPALAADTGGAIKGNRIDLCFDTVEEALAWGVRPVTVYVLGD

Sequences:

>Translated_294_residues
MHLKSLRGRALAIAAAAVLLAGALGQLGRPAQHTVTTATESAPAGEVLAAAATVPVMLIDGGERRTVQTAAHTVGELLKE
QRVTLGELDSLSVPESAAVTAGLEVRIVRRTEELVTEEEEIPFDTVDRPDGSLVVGAEEVVQPGAPGLKLVERLVRYEDG
VVVSSEVVTERVVQEPTPQIVAYGTGGVVSRGGERFRYTEVLEMVATGYTPGPESNPGGVGLTYTGIPAARGIVAVDPQV
IPLYTRLYIEGYGPALAADTGGAIKGNRIDLCFDTVEEALAWGVRPVTVYVLGD
>Mature_294_residues
MHLKSLRGRALAIAAAAVLLAGALGQLGRPAQHTVTTATESAPAGEVLAAAATVPVMLIDGGERRTVQTAAHTVGELLKE
QRVTLGELDSLSVPESAAVTAGLEVRIVRRTEELVTEEEEIPFDTVDRPDGSLVVGAEEVVQPGAPGLKLVERLVRYEDG
VVVSSEVVTERVVQEPTPQIVAYGTGGVVSRGGERFRYTEVLEMVATGYTPGPESNPGGVGLTYTGIPAARGIVAVDPQV
IPLYTRLYIEGYGPALAADTGGAIKGNRIDLCFDTVEEALAWGVRPVTVYVLGD

Specific function: Unknown

COG id: COG3584

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 G5 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010611
- InterPro:   IPR014733
- InterPro:   IPR007137
- InterPro:   IPR011098 [H]

Pfam domain/function: PF06725 3D; PF03990 DUF348; PF07501 G5 [H]

EC number: NA

Molecular weight: Translated: 30774; Mature: 30774

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: PS51109 G5

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHLKSLRGRALAIAAAAVLLAGALGQLGRPAQHTVTTATESAPAGEVLAAAATVPVMLID
CCCCHHCCHHHHHHHHHHHHHHHHHHCCCCCHHEEEECCCCCCCCHHHHHHHHCEEEEEE
GGERRTVQTAAHTVGELLKEQRVTLGELDSLSVPESAAVTAGLEVRIVRRTEELVTEEEE
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHEECCCEEEEEEHHHHHHCCCCC
IPFDTVDRPDGSLVVGAEEVVQPGAPGLKLVERLVRYEDGVVVSSEVVTERVVQEPTPQI
CCCCCCCCCCCCEEECHHHHHCCCCCHHHHHHHHHHHCCCEEEEHHHHHHHHHHCCCCCE
VAYGTGGVVSRGGERFRYTEVLEMVATGYTPGPESNPGGVGLTYTGIPAARGIVAVDPQV
EEEECCCHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCEEEECCCE
IPLYTRLYIEGYGPALAADTGGAIKGNRIDLCFDTVEEALAWGVRPVTVYVLGD
EEEEEEEEEECCCCEEECCCCCCCCCCEEEHHHHHHHHHHHCCCCEEEEEEECC
>Mature Secondary Structure
MHLKSLRGRALAIAAAAVLLAGALGQLGRPAQHTVTTATESAPAGEVLAAAATVPVMLID
CCCCHHCCHHHHHHHHHHHHHHHHHHCCCCCHHEEEECCCCCCCCHHHHHHHHCEEEEEE
GGERRTVQTAAHTVGELLKEQRVTLGELDSLSVPESAAVTAGLEVRIVRRTEELVTEEEE
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHEECCCEEEEEEHHHHHHCCCCC
IPFDTVDRPDGSLVVGAEEVVQPGAPGLKLVERLVRYEDGVVVSSEVVTERVVQEPTPQI
CCCCCCCCCCCCEEECHHHHHCCCCCHHHHHHHHHHHCCCEEEEHHHHHHHHHHCCCCCE
VAYGTGGVVSRGGERFRYTEVLEMVATGYTPGPESNPGGVGLTYTGIPAARGIVAVDPQV
EEEECCCHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCEEEECCCE
IPLYTRLYIEGYGPALAADTGGAIKGNRIDLCFDTVEEALAWGVRPVTVYVLGD
EEEEEEEEEECCCCEEECCCCCCCCCCEEEHHHHHHHHHHHCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]