| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51894278
Identifier: 51894278
GI number: 51894278
Start: 3344042
End: 3344665
Strand: Reverse
Name: 51894278
Synonym: STH3143
Alternate gene names: NA
Gene position: 3344665-3344042 (Counterclockwise)
Preceding gene: 51894279
Following gene: 51894277
Centisome position: 93.79
GC content: 74.2
Gene sequence:
>624_bases GTGCGGGGGTACCTGATCACGCTGCTGCTCATCGCCTTCCTGGTCGGGAGCCTCTTCCGGGCGTCGGAGGTGACGGGCAT GCGCATCTTCAACATGTTCGCCACCTTCGGGATCTTCCTGTTCGGCGTCGTCGGCTCCCTGGCCCTCACCCGGCTGCAGC AGCGCTCGGGGCAGAGGGGCGTCGAGGAGGCGCTGAAGGCCCTGGAGCCCGACTGGGTGATCACCGACTGGTCCGCCGCC CCCGGGGAGCGCCCGGACTACCTCCTGGTGGGGCCTGCGGGGCTCCTGGCCGTGTGCGTTGAGCACTCGCCGGGGCAGGC GCGGTCGGCCCGGGCCAGGCGGCGGCTGGCGGGGGCCGCGGACCGGGCGCGGCAGTGCGCCGACTGGGTGCGGTCCGAGC TCAGCGGCTGGCGTGAGGCCGCGGACCTGCCCGTGTTCCCGTTGGTGCTCCTCTCCCGCATGCGCGCTCCCGACGACCAA GAGGAGGACGGGGTGCCCGTCCTGAACCCCGAGTCGCTGGCCGGGTTCGTCGCCAACCTGGAGCCCGGCCCGGCCCTGAG CAGGCCGCTGCGCTACCGGATCACGCGCCGGCTGCGCGAGGGGCGCCTGCCCGAGACCGGCTAG
Upstream 100 bases:
>100_bases CGAGGACCGGCTGACCGACGAGGAGATCTCGGTCATCGCCGACTACCTGCTGGGGCTGAAGTAGCGCAGGGAAGGCTCGA CGGGGGATGGGGGTGAACCC
Downstream 100 bases:
>100_bases TGGCCCCCAAAGGAGGGAGAACCGTGCCGCACTATATCGACGAGAAGTGCATCGGCTGCACCGCCTGCGTTTCCGTCTGC CCGACCGAGGCGATCAGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 207; Mature: 207
Protein sequence:
>207_residues MRGYLITLLLIAFLVGSLFRASEVTGMRIFNMFATFGIFLFGVVGSLALTRLQQRSGQRGVEEALKALEPDWVITDWSAA PGERPDYLLVGPAGLLAVCVEHSPGQARSARARRRLAGAADRARQCADWVRSELSGWREAADLPVFPLVLLSRMRAPDDQ EEDGVPVLNPESLAGFVANLEPGPALSRPLRYRITRRLREGRLPETG
Sequences:
>Translated_207_residues MRGYLITLLLIAFLVGSLFRASEVTGMRIFNMFATFGIFLFGVVGSLALTRLQQRSGQRGVEEALKALEPDWVITDWSAA PGERPDYLLVGPAGLLAVCVEHSPGQARSARARRRLAGAADRARQCADWVRSELSGWREAADLPVFPLVLLSRMRAPDDQ EEDGVPVLNPESLAGFVANLEPGPALSRPLRYRITRRLREGRLPETG >Mature_207_residues MRGYLITLLLIAFLVGSLFRASEVTGMRIFNMFATFGIFLFGVVGSLALTRLQQRSGQRGVEEALKALEPDWVITDWSAA PGERPDYLLVGPAGLLAVCVEHSPGQARSARARRRLAGAADRARQCADWVRSELSGWREAADLPVFPLVLLSRMRAPDDQ EEDGVPVLNPESLAGFVANLEPGPALSRPLRYRITRRLREGRLPETG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22783; Mature: 22783
Theoretical pI: Translated: 9.29; Mature: 9.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGYLITLLLIAFLVGSLFRASEVTGMRIFNMFATFGIFLFGVVGSLALTRLQQRSGQRG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC VEEALKALEPDWVITDWSAAPGERPDYLLVGPAGLLAVCVEHSPGQARSARARRRLAGAA HHHHHHHCCCCCEEECCCCCCCCCCCEEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHH DRARQCADWVRSELSGWREAADLPVFPLVLLSRMRAPDDQEEDGVPVLNPESLAGFVANL HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCC EPGPALSRPLRYRITRRLREGRLPETG CCCCCHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MRGYLITLLLIAFLVGSLFRASEVTGMRIFNMFATFGIFLFGVVGSLALTRLQQRSGQRG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC VEEALKALEPDWVITDWSAAPGERPDYLLVGPAGLLAVCVEHSPGQARSARARRRLAGAA HHHHHHHCCCCCEEECCCCCCCCCCCEEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHH DRARQCADWVRSELSGWREAADLPVFPLVLLSRMRAPDDQEEDGVPVLNPESLAGFVANL HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCC EPGPALSRPLRYRITRRLREGRLPETG CCCCCHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA