Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51894278

Identifier: 51894278

GI number: 51894278

Start: 3344042

End: 3344665

Strand: Reverse

Name: 51894278

Synonym: STH3143

Alternate gene names: NA

Gene position: 3344665-3344042 (Counterclockwise)

Preceding gene: 51894279

Following gene: 51894277

Centisome position: 93.79

GC content: 74.2

Gene sequence:

>624_bases
GTGCGGGGGTACCTGATCACGCTGCTGCTCATCGCCTTCCTGGTCGGGAGCCTCTTCCGGGCGTCGGAGGTGACGGGCAT
GCGCATCTTCAACATGTTCGCCACCTTCGGGATCTTCCTGTTCGGCGTCGTCGGCTCCCTGGCCCTCACCCGGCTGCAGC
AGCGCTCGGGGCAGAGGGGCGTCGAGGAGGCGCTGAAGGCCCTGGAGCCCGACTGGGTGATCACCGACTGGTCCGCCGCC
CCCGGGGAGCGCCCGGACTACCTCCTGGTGGGGCCTGCGGGGCTCCTGGCCGTGTGCGTTGAGCACTCGCCGGGGCAGGC
GCGGTCGGCCCGGGCCAGGCGGCGGCTGGCGGGGGCCGCGGACCGGGCGCGGCAGTGCGCCGACTGGGTGCGGTCCGAGC
TCAGCGGCTGGCGTGAGGCCGCGGACCTGCCCGTGTTCCCGTTGGTGCTCCTCTCCCGCATGCGCGCTCCCGACGACCAA
GAGGAGGACGGGGTGCCCGTCCTGAACCCCGAGTCGCTGGCCGGGTTCGTCGCCAACCTGGAGCCCGGCCCGGCCCTGAG
CAGGCCGCTGCGCTACCGGATCACGCGCCGGCTGCGCGAGGGGCGCCTGCCCGAGACCGGCTAG

Upstream 100 bases:

>100_bases
CGAGGACCGGCTGACCGACGAGGAGATCTCGGTCATCGCCGACTACCTGCTGGGGCTGAAGTAGCGCAGGGAAGGCTCGA
CGGGGGATGGGGGTGAACCC

Downstream 100 bases:

>100_bases
TGGCCCCCAAAGGAGGGAGAACCGTGCCGCACTATATCGACGAGAAGTGCATCGGCTGCACCGCCTGCGTTTCCGTCTGC
CCGACCGAGGCGATCAGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MRGYLITLLLIAFLVGSLFRASEVTGMRIFNMFATFGIFLFGVVGSLALTRLQQRSGQRGVEEALKALEPDWVITDWSAA
PGERPDYLLVGPAGLLAVCVEHSPGQARSARARRRLAGAADRARQCADWVRSELSGWREAADLPVFPLVLLSRMRAPDDQ
EEDGVPVLNPESLAGFVANLEPGPALSRPLRYRITRRLREGRLPETG

Sequences:

>Translated_207_residues
MRGYLITLLLIAFLVGSLFRASEVTGMRIFNMFATFGIFLFGVVGSLALTRLQQRSGQRGVEEALKALEPDWVITDWSAA
PGERPDYLLVGPAGLLAVCVEHSPGQARSARARRRLAGAADRARQCADWVRSELSGWREAADLPVFPLVLLSRMRAPDDQ
EEDGVPVLNPESLAGFVANLEPGPALSRPLRYRITRRLREGRLPETG
>Mature_207_residues
MRGYLITLLLIAFLVGSLFRASEVTGMRIFNMFATFGIFLFGVVGSLALTRLQQRSGQRGVEEALKALEPDWVITDWSAA
PGERPDYLLVGPAGLLAVCVEHSPGQARSARARRRLAGAADRARQCADWVRSELSGWREAADLPVFPLVLLSRMRAPDDQ
EEDGVPVLNPESLAGFVANLEPGPALSRPLRYRITRRLREGRLPETG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22783; Mature: 22783

Theoretical pI: Translated: 9.29; Mature: 9.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGYLITLLLIAFLVGSLFRASEVTGMRIFNMFATFGIFLFGVVGSLALTRLQQRSGQRG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
VEEALKALEPDWVITDWSAAPGERPDYLLVGPAGLLAVCVEHSPGQARSARARRRLAGAA
HHHHHHHCCCCCEEECCCCCCCCCCCEEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHH
DRARQCADWVRSELSGWREAADLPVFPLVLLSRMRAPDDQEEDGVPVLNPESLAGFVANL
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCC
EPGPALSRPLRYRITRRLREGRLPETG
CCCCCHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MRGYLITLLLIAFLVGSLFRASEVTGMRIFNMFATFGIFLFGVVGSLALTRLQQRSGQRG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
VEEALKALEPDWVITDWSAAPGERPDYLLVGPAGLLAVCVEHSPGQARSARARRRLAGAA
HHHHHHHCCCCCEEECCCCCCCCCCCEEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHH
DRARQCADWVRSELSGWREAADLPVFPLVLLSRMRAPDDQEEDGVPVLNPESLAGFVANL
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCC
EPGPALSRPLRYRITRRLREGRLPETG
CCCCCHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA