| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51894223
Identifier: 51894223
GI number: 51894223
Start: 3290554
End: 3290688
Strand: Reverse
Name: 51894223
Synonym: STH3088
Alternate gene names: NA
Gene position: 3290688-3290554 (Counterclockwise)
Preceding gene: 51894224
Following gene: 51894222
Centisome position: 92.28
GC content: 63.7
Gene sequence:
>135_bases ATGGACGAGCGCCAGATCCGGCAGCGGTTGGAGAGCCTGGTCGACCGGTGGCTGAAGGCCTCGCCGGCGGAGAAGCGCAT TCTGATCCAGGAGAAGATCCGGTTGGAAGAGATGCTGGAGGAGGAGCGGGCGTAA
Upstream 100 bases:
>100_bases ATTGCAAGCGCGACATCTGCGGGATACTATAGGCCGGGGCTGAGATCTACATATAGCCAAAATCGCCATACAGCAACGGT GGCGGGAGGTGAAACGGCAG
Downstream 100 bases:
>100_bases GCGCGCGTGCTGCAACTCACCCTTGACGCCTGCACACCAAAGGGATATACTCGTCGGTGTGCATGAACTCCATAGTGAAC GACCGTAGACAGCAGGTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 44; Mature: 44
Protein sequence:
>44_residues MDERQIRQRLESLVDRWLKASPAEKRILIQEKIRLEEMLEEERA
Sequences:
>Translated_44_residues MDERQIRQRLESLVDRWLKASPAEKRILIQEKIRLEEMLEEERA >Mature_44_residues MDERQIRQRLESLVDRWLKASPAEKRILIQEKIRLEEMLEEERA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5436; Mature: 5436
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDERQIRQRLESLVDRWLKASPAEKRILIQEKIRLEEMLEEERA CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MDERQIRQRLESLVDRWLKASPAEKRILIQEKIRLEEMLEEERA CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA