| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51894157
Identifier: 51894157
GI number: 51894157
Start: 3240737
End: 3241324
Strand: Reverse
Name: 51894157
Synonym: STH3021
Alternate gene names: NA
Gene position: 3241324-3240737 (Counterclockwise)
Preceding gene: 51894161
Following gene: 51894156
Centisome position: 90.89
GC content: 71.94
Gene sequence:
>588_bases ATGGTCAAGCGAATTGGTCCCATTCCGGAAACGAAGCCGCGTTCCTGGCGGCACAGGCTGACGGCACCCCTTTCCGCCGC GGCGAGGCAGGTGGCGGAGCTGGAGGAAGGGGTAGGGCTCCGGCTGCTGACCGAGCGGCTGTCGGCGATGGACCTGGGAG AGCGGAGCGTGCTGGTGGTCCGGCCCACCCTCGGGTTCATGACCGTCGACCTCTGCCTGGTCGGTCCGGGCCGGGCCCTG GTGATCAACGCGCTCCACTGGGCGGGCGACATCGTCCCGGGCCCGAAGGGCGAGTGGCGCGGCGCAGGGGGGAAGGTGGA TCTGGGACGGCCGGACCGCAGGGCGCGGGTGTTCTGCGAGCGGCTGGCCTTTACTGGCCGTGCCCGGGGGATCGTCCTGG AGCCTGTGGTGGTGTTTACGGCCGGCGCCGCGCGCTGCCAGGGAACCGAACCCGAGGCCACCCTGGTCCAGTGGGACGAG CTGGATGCGTTCGTCGCGGGGCGGATTCCTGCGTCCGCGGTCGGGTTCCCCGCGGCCGACCTGATCCGGCTGATCAGTCC GCCGGGCGCCGGGGGGACGACGGAGTAG
Upstream 100 bases:
>100_bases AGGTGCCCGCAGGGCGGGTCCGCCCACCGCACTGCGTGGGGCCTCCCTCCGGAGCAAAGGGCAGGATGAAATACGAAAGA GTCTGGGCTATACTGAGGGT
Downstream 100 bases:
>100_bases AGGAGGAGCGCGATGCACCTGAACCGGTTCTGGTCCTCTGTCTGGACGGTGGCCGGCTTCCTGTTGCTGATCACCCTGCT GCAGATGATCGCGGACCAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 195; Mature: 195
Protein sequence:
>195_residues MVKRIGPIPETKPRSWRHRLTAPLSAAARQVAELEEGVGLRLLTERLSAMDLGERSVLVVRPTLGFMTVDLCLVGPGRAL VINALHWAGDIVPGPKGEWRGAGGKVDLGRPDRRARVFCERLAFTGRARGIVLEPVVVFTAGAARCQGTEPEATLVQWDE LDAFVAGRIPASAVGFPAADLIRLISPPGAGGTTE
Sequences:
>Translated_195_residues MVKRIGPIPETKPRSWRHRLTAPLSAAARQVAELEEGVGLRLLTERLSAMDLGERSVLVVRPTLGFMTVDLCLVGPGRAL VINALHWAGDIVPGPKGEWRGAGGKVDLGRPDRRARVFCERLAFTGRARGIVLEPVVVFTAGAARCQGTEPEATLVQWDE LDAFVAGRIPASAVGFPAADLIRLISPPGAGGTTE >Mature_195_residues MVKRIGPIPETKPRSWRHRLTAPLSAAARQVAELEEGVGLRLLTERLSAMDLGERSVLVVRPTLGFMTVDLCLVGPGRAL VINALHWAGDIVPGPKGEWRGAGGKVDLGRPDRRARVFCERLAFTGRARGIVLEPVVVFTAGAARCQGTEPEATLVQWDE LDAFVAGRIPASAVGFPAADLIRLISPPGAGGTTE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20788; Mature: 20788
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKRIGPIPETKPRSWRHRLTAPLSAAARQVAELEEGVGLRLLTERLSAMDLGERSVLVV CCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEE RPTLGFMTVDLCLVGPGRALVINALHWAGDIVPGPKGEWRGAGGKVDLGRPDRRARVFCE ECCCCEEEEEEEEECCCCEEEEEEHHHHCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHH RLAFTGRARGIVLEPVVVFTAGAARCQGTEPEATLVQWDELDAFVAGRIPASAVGFPAAD HHHHCCCCCCEEECCCEEEECCCHHCCCCCCCCEEEEHHHHCHHHCCCCCCHHCCCCHHH LIRLISPPGAGGTTE HHHHHCCCCCCCCCC >Mature Secondary Structure MVKRIGPIPETKPRSWRHRLTAPLSAAARQVAELEEGVGLRLLTERLSAMDLGERSVLVV CCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEE RPTLGFMTVDLCLVGPGRALVINALHWAGDIVPGPKGEWRGAGGKVDLGRPDRRARVFCE ECCCCEEEEEEEEECCCCEEEEEEHHHHCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHH RLAFTGRARGIVLEPVVVFTAGAARCQGTEPEATLVQWDELDAFVAGRIPASAVGFPAAD HHHHCCCCCCEEECCCEEEECCCHHCCCCCCCCEEEEHHHHCHHHCCCCCCHHCCCCHHH LIRLISPPGAGGTTE HHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA