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The map label for this gene is flgC [H]

Identifier: 51894141

GI number: 51894141

Start: 3224120

End: 3224563

Strand: Reverse

Name: flgC [H]

Synonym: STH3005

Alternate gene names: 51894141

Gene position: 3224563-3224120 (Counterclockwise)

Preceding gene: 51894142

Following gene: 51894140

Centisome position: 90.42

GC content: 69.37

Gene sequence:

>444_bases
ATGCGGATGTTTCAGGCCATGGAGGCCAGCGCTTCGGCCCTGACCGCCGAGCGGCTGCGCATGGACGTGATCGCCAACAA
CCTGGCCAACTACCGCACCACCCGCACGGCGGAGGGCGGGCCCTACCGCCGCCGCACCGTGGTGGTGGAGGAGCGGCCCA
ACACCTTCGCCAGCGAGCTGGCCAGGCAGGCGGGCCGGCCGGCCGAGCCCGGGCTGGGGGTGCGGGTGACGCAGATCGTG
GAGGATCCCAGCCCCTTCAAGGAGGTCCACGATCCCACGCATCCCGACGCCGACCCGGTCACCGGCATCGTCCGCCTGCC
CAACGTGGACCTGCTCCAGGAAATCACCGATCTCATGCTGGCGCAGCGCATGTACGATGCCAACCTGACGGCGTTCAACG
CCGCGAAGAACATGGCCCTCAGGGCCCTGGAGATTGGCCGCTAG

Upstream 100 bases:

>100_bases
ATGGCCGCCAACCAGATCTGGTACGCCGCGCTCACGCGACAGATCAACGACCACTTTGACCGGCTGCGCATGGTGATCAC
GGAGGGGAGGCGCTAGTTAA

Downstream 100 bases:

>100_bases
CCGCTAGGAGAGGAGAACCGCCATGGACATTCAACGGATCAACGCCATGCTTTCGCTGGAGCCGACGATCTCCCGCGAGA
ACCGCAGTGAGGTCCGGGAG

Product: flagella basal body rod protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MRMFQAMEASASALTAERLRMDVIANNLANYRTTRTAEGGPYRRRTVVVEERPNTFASELARQAGRPAEPGLGVRVTQIV
EDPSPFKEVHDPTHPDADPVTGIVRLPNVDLLQEITDLMLAQRMYDANLTAFNAAKNMALRALEIGR

Sequences:

>Translated_147_residues
MRMFQAMEASASALTAERLRMDVIANNLANYRTTRTAEGGPYRRRTVVVEERPNTFASELARQAGRPAEPGLGVRVTQIV
EDPSPFKEVHDPTHPDADPVTGIVRLPNVDLLQEITDLMLAQRMYDANLTAFNAAKNMALRALEIGR
>Mature_147_residues
MRMFQAMEASASALTAERLRMDVIANNLANYRTTRTAEGGPYRRRTVVVEERPNTFASELARQAGRPAEPGLGVRVTQIV
EDPSPFKEVHDPTHPDADPVTGIVRLPNVDLLQEITDLMLAQRMYDANLTAFNAAKNMALRALEIGR

Specific function: Unknown

COG id: COG1558

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787314, Length=147, Percent_Identity=34.0136054421769, Blast_Score=89, Evalue=1e-19,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR006299 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 16319; Mature: 16319

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: PS00588 FLAGELLA_BB_ROD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRMFQAMEASASALTAERLRMDVIANNLANYRTTRTAEGGPYRRRTVVVEERPNTFASEL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCHHHHHH
ARQAGRPAEPGLGVRVTQIVEDPSPFKEVHDPTHPDADPVTGIVRLPNVDLLQEITDLML
HHHCCCCCCCCCCEEHHHHHCCCCCHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHHH
AQRMYDANLTAFNAAKNMALRALEIGR
HHHHHHCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRMFQAMEASASALTAERLRMDVIANNLANYRTTRTAEGGPYRRRTVVVEERPNTFASEL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCHHHHHH
ARQAGRPAEPGLGVRVTQIVEDPSPFKEVHDPTHPDADPVTGIVRLPNVDLLQEITDLML
HHHCCCCCCCCCCEEHHHHHCCCCCHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHHH
AQRMYDANLTAFNAAKNMALRALEIGR
HHHHHHCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1905667; 9384377 [H]