Click here to switch to the map view.

The map label for this gene is fliC [H]

Identifier: 51894110

GI number: 51894110

Start: 3197157

End: 3197984

Strand: Reverse

Name: fliC [H]

Synonym: STH2974

Alternate gene names: 51894110

Gene position: 3197984-3197157 (Counterclockwise)

Preceding gene: 51894112

Following gene: 51894109

Centisome position: 89.68

GC content: 60.99

Gene sequence:

>828_bases
GTGCGTATCAACACGAACCTGGCTGCACTGAATGCATGGCGTGCGCTGACCATCAACCACGGTGCCATGACTAAGTCCTT
GGAGAAGCTGTCCTCGGGCTACCGGGTCAACCGGGCTGCCGACGACGCGGCCGGCCTCGCGGTATCGGAGAAGATGCGTG
CTCAGATCCGCGGCCTGAATATGGCCGTTCGGAATGCACAGGACGGCGTGTCCCTAATCCAGACGGCCGAGGGCGGTGCG
CAGAAGATTCAGGACATGCTCCAGCGCATGCGGGAGCTGGCCGTTCAGGCGGCGAGCGATACCCTGGACGATCCGGACCG
GCAGTTGCTGAACAAGGAGTTCGCGCAGCTTATTGAAGAAATCGAGCGTACGGCCAACAGCACCACCTTCAACGAGAAGG
AGTTGCTGAATGCGGATGCGGCGAGTGCAACCTTCGACATTCACGTCGGTCCTGGTGCCGATCCCGACAACGACGTCATT
ACGCTCCAGATGGCGGATCTCACTGATACCGGGCTGAAAATCAGTGAGCTTACAATTTCCACGAAGAGCGACGCCACCAC
CGCCATCAGCACGCTGGACAACGCCATTGACACGGTGAGCTCCACTCGTGCCACCTTCGGTGCCTATCAGAACCGCCTGG
AGGGCGCCATCGAAACGCTGAAGATCCAGGCCGAGAACCTGACCGCCGCCGAGAGCCGCATCCGCGACGCCGATATGGCC
CTTGAGATGGCCACCTTCACCAAGTACCAGATCCTGCAGCAGGCCTCGACCGCCATGCTGGCCCAGGCCAACATGTCCAC
CCAGTCCATCCTGTCGCTGCTGCGGTAA

Upstream 100 bases:

>100_bases
TTGTCGAACCAGGTGGCGATGATCTTCAATACCGGCCGGCAGGGATGCCGGGGCGTCATCTGGGTGCGACGAGTACAACA
GGAGCAAGGAGGCTGCTAAC

Downstream 100 bases:

>100_bases
GCGAAACCATAGCGCATACCGGGGACGCCGTCCCCCCGGACGGGGGGACGGCGTCTATCGCAGCAGGCGGTCACTGAGGA
GGGAGTCTCTTGGATCTCGC

Product: flagellin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 275; Mature: 275

Protein sequence:

>275_residues
MRINTNLAALNAWRALTINHGAMTKSLEKLSSGYRVNRAADDAAGLAVSEKMRAQIRGLNMAVRNAQDGVSLIQTAEGGA
QKIQDMLQRMRELAVQAASDTLDDPDRQLLNKEFAQLIEEIERTANSTTFNEKELLNADAASATFDIHVGPGADPDNDVI
TLQMADLTDTGLKISELTISTKSDATTAISTLDNAIDTVSSTRATFGAYQNRLEGAIETLKIQAENLTAAESRIRDADMA
LEMATFTKYQILQQASTAMLAQANMSTQSILSLLR

Sequences:

>Translated_275_residues
MRINTNLAALNAWRALTINHGAMTKSLEKLSSGYRVNRAADDAAGLAVSEKMRAQIRGLNMAVRNAQDGVSLIQTAEGGA
QKIQDMLQRMRELAVQAASDTLDDPDRQLLNKEFAQLIEEIERTANSTTFNEKELLNADAASATFDIHVGPGADPDNDVI
TLQMADLTDTGLKISELTISTKSDATTAISTLDNAIDTVSSTRATFGAYQNRLEGAIETLKIQAENLTAAESRIRDADMA
LEMATFTKYQILQQASTAMLAQANMSTQSILSLLR
>Mature_275_residues
MRINTNLAALNAWRALTINHGAMTKSLEKLSSGYRVNRAADDAAGLAVSEKMRAQIRGLNMAVRNAQDGVSLIQTAEGGA
QKIQDMLQRMRELAVQAASDTLDDPDRQLLNKEFAQLIEEIERTANSTTFNEKELLNADAASATFDIHVGPGADPDNDVI
TLQMADLTDTGLKISELTISTKSDATTAISTLDNAIDTVSSTRATFGAYQNRLEGAIETLKIQAENLTAAESRIRDADMA
LEMATFTKYQILQQASTAMLAQANMSTQSILSLLR

Specific function: Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella [H]

COG id: COG1344

COG function: function code N; Flagellin and related hook-associated proteins

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial flagellin family [H]

Homologues:

Organism=Escherichia coli, GI1788232, Length=162, Percent_Identity=39.5061728395062, Blast_Score=111, Evalue=6e-26,

Paralogues:

None

Copy number: 200,000-400,000 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001492
- InterPro:   IPR001029 [H]

Pfam domain/function: PF00700 Flagellin_C; PF00669 Flagellin_N [H]

EC number: NA

Molecular weight: Translated: 29769; Mature: 29769

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRINTNLAALNAWRALTINHGAMTKSLEKLSSGYRVNRAADDAAGLAVSEKMRAQIRGLN
CCCCCCHHHHHHHEEEEEECHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHHHHH
MAVRNAQDGVSLIQTAEGGAQKIQDMLQRMRELAVQAASDTLDDPDRQLLNKEFAQLIEE
HHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
IERTANSTTFNEKELLNADAASATFDIHVGPGADPDNDVITLQMADLTDTGLKISELTIS
HHHHHCCCCCCHHHHHCCCCCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCEEEEEEEE
TKSDATTAISTLDNAIDTVSSTRATFGAYQNRLEGAIETLKIQAENLTAAESRIRDADMA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHH
LEMATFTKYQILQQASTAMLAQANMSTQSILSLLR
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHC
>Mature Secondary Structure
MRINTNLAALNAWRALTINHGAMTKSLEKLSSGYRVNRAADDAAGLAVSEKMRAQIRGLN
CCCCCCHHHHHHHEEEEEECHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHHHHH
MAVRNAQDGVSLIQTAEGGAQKIQDMLQRMRELAVQAASDTLDDPDRQLLNKEFAQLIEE
HHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
IERTANSTTFNEKELLNADAASATFDIHVGPGADPDNDVITLQMADLTDTGLKISELTIS
HHHHHCCCCCCHHHHHCCCCCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCEEEEEEEE
TKSDATTAISTLDNAIDTVSSTRATFGAYQNRLEGAIETLKIQAENLTAAESRIRDADMA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHH
LEMATFTKYQILQQASTAMLAQANMSTQSILSLLR
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1479346; 11058132 [H]