Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is yceI [C]

Identifier: 51894086

GI number: 51894086

Start: 3174309

End: 3174839

Strand: Reverse

Name: yceI [C]

Synonym: STH2950

Alternate gene names: 51894086

Gene position: 3174839-3174309 (Counterclockwise)

Preceding gene: 51894089

Following gene: 51894085

Centisome position: 89.03

GC content: 64.03

Gene sequence:

>531_bases
ATGGCCAAGAGCGTATGGGTAGTGGACAATTCGCACAGCCTGGTTGAGTTCGCCGTGCGGCACATGATGATCGCGACGGT
GAAGGGCCGCTTCACGCAGGTGGAGGGCCGCATTGAGGTCGATCCCGCGGATATCACCGGTGCATACTTCGAGGGCAGCG
TCCCGGTCGCATCCATCAACACCGCCGACTCCGCCCGCGACGACCATCTGCGTTCGGCCGACTTCTTCGATGCCCAGAAC
TATCCGACTCTGACCTTCAAGAGCACGAAGGTGGAGCGCGCCGGCGACGGCTACAAGCTGACCGGCGACCTGACCATCCG
CGGCGTCACCAAGCCGGTGACCTTCGACCTCGAGTTTGCCGGCGTGGGCAAGGACCCGTGGGGGAACGAGAAGATCGGCT
TCTCGGCCACCGGCAAGATCAACCGCAAGGACTTCGGGCTCACCTGGAACGCGGTGCTGGAGACCGGCGGCGTCCTGGTG
GGTGAAGAGGTGAAGATCGAACTGCACCTGGAGGCCGCCAGGCAGGCCTGA

Upstream 100 bases:

>100_bases
GGCCCCGGTCATCTGCCCGTACCTACTTACGGTTTGACACCAACTAACGATATAGAAGGCACGGGCCTACCCCGGCCGAA
CACACGGGAGGAGGAAGCTT

Downstream 100 bases:

>100_bases
GGGCGGCTTCACCGGTTACCAGCATTTGGACGGGCGCAAGCTCGGCCCGGATCCCCGCCGCGGCCGCGAGGTCATGTATA
CTGAACACAGATCATCAACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 176; Mature: 175

Protein sequence:

>176_residues
MAKSVWVVDNSHSLVEFAVRHMMIATVKGRFTQVEGRIEVDPADITGAYFEGSVPVASINTADSARDDHLRSADFFDAQN
YPTLTFKSTKVERAGDGYKLTGDLTIRGVTKPVTFDLEFAGVGKDPWGNEKIGFSATGKINRKDFGLTWNAVLETGGVLV
GEEVKIELHLEAARQA

Sequences:

>Translated_176_residues
MAKSVWVVDNSHSLVEFAVRHMMIATVKGRFTQVEGRIEVDPADITGAYFEGSVPVASINTADSARDDHLRSADFFDAQN
YPTLTFKSTKVERAGDGYKLTGDLTIRGVTKPVTFDLEFAGVGKDPWGNEKIGFSATGKINRKDFGLTWNAVLETGGVLV
GEEVKIELHLEAARQA
>Mature_175_residues
AKSVWVVDNSHSLVEFAVRHMMIATVKGRFTQVEGRIEVDPADITGAYFEGSVPVASINTADSARDDHLRSADFFDAQNY
PTLTFKSTKVERAGDGYKLTGDLTIRGVTKPVTFDLEFAGVGKDPWGNEKIGFSATGKINRKDFGLTWNAVLETGGVLVG
EEVKIELHLEAARQA

Specific function: Unknown

COG id: COG2353

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0312 family [H]

Homologues:

Organism=Escherichia coli, GI1787295, Length=136, Percent_Identity=40.4411764705882, Blast_Score=115, Evalue=2e-27,

Paralogues:

None

Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007372 [H]

Pfam domain/function: PF04264 YceI [H]

EC number: NA

Molecular weight: Translated: 19208; Mature: 19077

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKSVWVVDNSHSLVEFAVRHMMIATVKGRFTQVEGRIEVDPADITGAYFEGSVPVASIN
CCCEEEEEECCCHHHHHHHHHHHEEEECCCEEEECCEEEECCCCCCCEEEECCCCEEEEC
TADSARDDHLRSADFFDAQNYPTLTFKSTKVERAGDGYKLTGDLTIRGVTKPVTFDLEFA
CCCCCCCCCCCCCCCCCCCCCCEEEEECCEEECCCCCEEEEEEEEEEEECCCEEEEEEEE
GVGKDPWGNEKIGFSATGKINRKDFGLTWNAVLETGGVLVGEEVKIELHLEAARQA
ECCCCCCCCCEECEEECCCCCCCCCCEEEEHEECCCCEEECCEEEEEEEEEECCCC
>Mature Secondary Structure 
AKSVWVVDNSHSLVEFAVRHMMIATVKGRFTQVEGRIEVDPADITGAYFEGSVPVASIN
CCEEEEEECCCHHHHHHHHHHHEEEECCCEEEECCEEEECCCCCCCEEEECCCCEEEEC
TADSARDDHLRSADFFDAQNYPTLTFKSTKVERAGDGYKLTGDLTIRGVTKPVTFDLEFA
CCCCCCCCCCCCCCCCCCCCCCEEEEECCEEECCCCCEEEEEEEEEEEECCCEEEEEEEE
GVGKDPWGNEKIGFSATGKINRKDFGLTWNAVLETGGVLVGEEVKIELHLEAARQA
ECCCCCCCCCEECEEECCCCCCCCCCEEEEHEECCCCEEECCEEEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11418146 [H]