Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51894077

Identifier: 51894077

GI number: 51894077

Start: 3165006

End: 3165917

Strand: Reverse

Name: 51894077

Synonym: STH2941

Alternate gene names: NA

Gene position: 3165917-3165006 (Counterclockwise)

Preceding gene: 51894078

Following gene: 51894076

Centisome position: 88.78

GC content: 70.72

Gene sequence:

>912_bases
ATGGAGCAGGGCGGCCTGTCGTCGGTGGAGCAGGCCGGGATCCACCTGATCATGAGCCGTTGTCGGCTCCTCCTTCAGGA
TGCGCCCGGCGCGGTGCTGTCTGGCCTGAGCGCCGTGAAACTGGCCGAGCAGGAGCGCGAGTACGACCTGCTGGGCCGGG
CCCTCCTCGCGCTCGGGGCCGCCCATGCGGCGATGCAGCAGTTCGAGCAGGCTCTGAGCTGCTTTCAACGGTACTTCACG
TACCGGGCCTACTACCGCGACGCGGCCCGGCTGGAGGGCGCGGCGTGGAAGTCGCTGGGGATCACCTACCAGCGGATGCT
GCAGCCCAAGCAGGCCGTGCACGCCCTGGAGGCGGCGCGGACCTGGTTCGGCGGCCGGCAGATGGAGCACGGCGTCTTCA
CCACCACCCACGACCTCATCAACGTTTACCTCTACCTGGCGAAGGAGGACCGCAGCCTGCGGCGGCCGGTCCGGCGGCTG
CTCATCGAGCAGCGCGGGATTGCGGCCCGGCGTCCGACCGAGCCGTACTACGCCGGCACCTATCTGCTGGACCTCGCCGC
CTGGCTGGCCAGCGGCGGCTACTACGGACGGGCGGCGGCGGCAGCCGTGCGCGCCCTGTTCGTCCATCGCGATGATCCCG
CCCACGCCTGCCACTGCTACCTGCTGCTCGCCCGGTGCGAGTTGCAGCTGGGCGAAGCGCACAAGGCCCTCACCTTCGCG
CTCGCGGCCCAGAACGAGGCGGTCATGGCCGGCCGACCCGAGCTGGAGCAGCTCGCCGCCGATGCCCTGGATGAGGTGGT
GCAGCGGGAGGGCGTGGAGATCCTGCGCCACCTCGATGCCGCCTACCAGGCCAGCGCCCGGTTTCCCGAGGAGATGCCGA
CAGTCCCGCTGCTCAGGCGGGACCTCCAGTAG

Upstream 100 bases:

>100_bases
ATCACCCCAGGAAAGAAGGGGATGAGGCATGGTCGACGCGTTAACCCGCCTCCTGGAGGAGGGCAGGTACGCCCGTTGCC
TGTTTGCGGCGGAGCAGATC

Downstream 100 bases:

>100_bases
CCGCCTTCCGACAGCCCCGCGGACGGGGCTGTTTCCTTTCCGCCCGGGGCAGGGAAGACTATGCGCAAATCTGGGAGAGG
GGCGGTGAGTGGATGACACT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MEQGGLSSVEQAGIHLIMSRCRLLLQDAPGAVLSGLSAVKLAEQEREYDLLGRALLALGAAHAAMQQFEQALSCFQRYFT
YRAYYRDAARLEGAAWKSLGITYQRMLQPKQAVHALEAARTWFGGRQMEHGVFTTTHDLINVYLYLAKEDRSLRRPVRRL
LIEQRGIAARRPTEPYYAGTYLLDLAAWLASGGYYGRAAAAAVRALFVHRDDPAHACHCYLLLARCELQLGEAHKALTFA
LAAQNEAVMAGRPELEQLAADALDEVVQREGVEILRHLDAAYQASARFPEEMPTVPLLRRDLQ

Sequences:

>Translated_303_residues
MEQGGLSSVEQAGIHLIMSRCRLLLQDAPGAVLSGLSAVKLAEQEREYDLLGRALLALGAAHAAMQQFEQALSCFQRYFT
YRAYYRDAARLEGAAWKSLGITYQRMLQPKQAVHALEAARTWFGGRQMEHGVFTTTHDLINVYLYLAKEDRSLRRPVRRL
LIEQRGIAARRPTEPYYAGTYLLDLAAWLASGGYYGRAAAAAVRALFVHRDDPAHACHCYLLLARCELQLGEAHKALTFA
LAAQNEAVMAGRPELEQLAADALDEVVQREGVEILRHLDAAYQASARFPEEMPTVPLLRRDLQ
>Mature_303_residues
MEQGGLSSVEQAGIHLIMSRCRLLLQDAPGAVLSGLSAVKLAEQEREYDLLGRALLALGAAHAAMQQFEQALSCFQRYFT
YRAYYRDAARLEGAAWKSLGITYQRMLQPKQAVHALEAARTWFGGRQMEHGVFTTTHDLINVYLYLAKEDRSLRRPVRRL
LIEQRGIAARRPTEPYYAGTYLLDLAAWLASGGYYGRAAAAAVRALFVHRDDPAHACHCYLLLARCELQLGEAHKALTFA
LAAQNEAVMAGRPELEQLAADALDEVVQREGVEILRHLDAAYQASARFPEEMPTVPLLRRDLQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33840; Mature: 33840

Theoretical pI: Translated: 7.61; Mature: 7.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQGGLSSVEQAGIHLIMSRCRLLLQDAPGAVLSGLSAVKLAEQEREYDLLGRALLALGA
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AHAAMQQFEQALSCFQRYFTYRAYYRDAARLEGAAWKSLGITYQRMLQPKQAVHALEAAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCHHHHHHHHHHHH
TWFGGRQMEHGVFTTTHDLINVYLYLAKEDRSLRRPVRRLLIEQRGIAARRPTEPYYAGT
HHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH
YLLDLAAWLASGGYYGRAAAAAVRALFVHRDDPAHACHCYLLLARCELQLGEAHKALTFA
HHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAAQNEAVMAGRPELEQLAADALDEVVQREGVEILRHLDAAYQASARFPEEMPTVPLLRR
HHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHH
DLQ
CCC
>Mature Secondary Structure
MEQGGLSSVEQAGIHLIMSRCRLLLQDAPGAVLSGLSAVKLAEQEREYDLLGRALLALGA
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AHAAMQQFEQALSCFQRYFTYRAYYRDAARLEGAAWKSLGITYQRMLQPKQAVHALEAAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCHHHHHHHHHHHH
TWFGGRQMEHGVFTTTHDLINVYLYLAKEDRSLRRPVRRLLIEQRGIAARRPTEPYYAGT
HHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH
YLLDLAAWLASGGYYGRAAAAAVRALFVHRDDPAHACHCYLLLARCELQLGEAHKALTFA
HHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAAQNEAVMAGRPELEQLAADALDEVVQREGVEILRHLDAAYQASARFPEEMPTVPLLRR
HHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHH
DLQ
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA