Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is perR [H]

Identifier: 51894012

GI number: 51894012

Start: 3100558

End: 3101028

Strand: Reverse

Name: perR [H]

Synonym: STH2876

Alternate gene names: 51894012

Gene position: 3101028-3100558 (Counterclockwise)

Preceding gene: 51894016

Following gene: 51894011

Centisome position: 86.96

GC content: 69.21

Gene sequence:

>471_bases
ATGACCGAGAGCGGGCACCAGGTCGCGGAACAGCACCGGGAGGATCCGTTCACCGCGGGCCTGCGCGCCGCCGGGCTGAA
GCTCACGGCCCAGCGCGCCGCCATCTGCGCGGCCCTCGCGGACATGGCGGGGAAGCAGCACCCCACCGTGCAGGAGATCT
TCGAAGCCGCCCGGAAGCACCACCCCGGCGTCAGCCTTGCCACGGTGTACAATACCCTGACCGTCCTGAAGGAGCGGGGC
CTGGTCTATGAGCTGGGGCCGGACGCGGCGGGCGCCGTCCACTACGAGCTGGACGTCGACACGCACGTCAACGTCATCTG
CATCCGCTGCAAGCAGGTGATCGACCTGCACCACATCTCCACCGGACTGGAGGAAATGGTGCAGGCCGAGACCGGATACC
GGCTGGTGGGCGCCCAGATGCTCTACTACGGCATCTGCCCGGCCTGCGCCCGCGACGGTGCCGCCGACTGA

Upstream 100 bases:

>100_bases
AAAACTGGTGATGGGAGGTTCCGGGCAAAAGACTATTGCAGTCACGCGGGATCTGATATACTGTTAACTGGAATGATTCT
CGCTGTGGGGGGTGAACGCC

Downstream 100 bases:

>100_bases
TTCCCCTCCGTCTGCCGATCCCTTTCGCCACGGCTCGGGCCGTGGCGTATATTTTTGTGTTCGGGCCCATCATCCTCTTG
CCAACCGCCCTGGAGAGAGT

Product: Fur family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 155

Protein sequence:

>156_residues
MTESGHQVAEQHREDPFTAGLRAAGLKLTAQRAAICAALADMAGKQHPTVQEIFEAARKHHPGVSLATVYNTLTVLKERG
LVYELGPDAAGAVHYELDVDTHVNVICIRCKQVIDLHHISTGLEEMVQAETGYRLVGAQMLYYGICPACARDGAAD

Sequences:

>Translated_156_residues
MTESGHQVAEQHREDPFTAGLRAAGLKLTAQRAAICAALADMAGKQHPTVQEIFEAARKHHPGVSLATVYNTLTVLKERG
LVYELGPDAAGAVHYELDVDTHVNVICIRCKQVIDLHHISTGLEEMVQAETGYRLVGAQMLYYGICPACARDGAAD
>Mature_155_residues
TESGHQVAEQHREDPFTAGLRAAGLKLTAQRAAICAALADMAGKQHPTVQEIFEAARKHHPGVSLATVYNTLTVLKERGL
VYELGPDAAGAVHYELDVDTHVNVICIRCKQVIDLHHISTGLEEMVQAETGYRLVGAQMLYYGICPACARDGAAD

Specific function: Manganese-dependent repressor that controls a regulon of oxidative stress resistance and iron-storage proteins. May act as a hydrogen peroxide and organic hydroperoxide sensor [H]

COG id: COG0735

COG function: function code P; Fe2+/Zn2+ uptake regulation proteins

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Fur family [H]

Homologues:

None

Paralogues:

None

Copy number: 3432 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002481 [H]

Pfam domain/function: PF01475 FUR [H]

EC number: NA

Molecular weight: Translated: 16850; Mature: 16719

Theoretical pI: Translated: 6.22; Mature: 6.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTESGHQVAEQHREDPFTAGLRAAGLKLTAQRAAICAALADMAGKQHPTVQEIFEAARKH
CCCCHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHC
HPGVSLATVYNTLTVLKERGLVYELGPDAAGAVHYELDVDTHVNVICIRCKQVIDLHHIS
CCCCHHHHHHHHHHHHHHCCCEEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHH
TGLEEMVQAETGYRLVGAQMLYYGICPACARDGAAD
HHHHHHHHHHCCCHHHHHHHHHHHCCHHHCCCCCCC
>Mature Secondary Structure 
TESGHQVAEQHREDPFTAGLRAAGLKLTAQRAAICAALADMAGKQHPTVQEIFEAARKH
CCCHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHC
HPGVSLATVYNTLTVLKERGLVYELGPDAAGAVHYELDVDTHVNVICIRCKQVIDLHHIS
CCCCHHHHHHHHHHHHHHCCCEEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHH
TGLEEMVQAETGYRLVGAQMLYYGICPACARDGAAD
HHHHHHHHHHCCCHHHHHHHHHHHCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA