| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51893717
Identifier: 51893717
GI number: 51893717
Start: 2763076
End: 2763564
Strand: Reverse
Name: 51893717
Synonym: STH2579
Alternate gene names: NA
Gene position: 2763564-2763076 (Counterclockwise)
Preceding gene: 51893718
Following gene: 51893715
Centisome position: 77.49
GC content: 63.39
Gene sequence:
>489_bases TTGCTTGCAAAGCGGTCGCTTAGCTCAGTTGGTAGAGCACGTGCTTTACACGCATGGGGTCGGGGGTTCGAGTCCCTCAG CGACCACCAACAGCCACAAGGGTTTACGGGATCGGGCTCCCTGGCCGGGGCTTGCGCCCTGACTCGTCTCGTGGGCCGCG TGCCCCGTTGCGGAGCCGATCCGATGGCCGCCTGGAAGAAAGCATCAACCTTCCGGGCGGCTTCTTCTCATTCTCTCTCC AGCGCGTGCGCAGATCGGTTCGCCGTCATCGTGACGGTCGAGCGACCCAGGGCCTTCTGCGTCACCGTATCCGAGACGCC TTCGCGGCCTGGAGTCGGCACTGCTGCCGAGGGGTGTGGAATGGCCCTCATCGTTACTCTGCCTGTGCCTCTTCGGGTCC GTTGCCGTTGCTTTCCTCCAGCTCTCGTTCCATCTCGAGGGCCCAGTCAGCCCACTTTGCGGCCAGAACTGCGTTGCCTT GTGCCATGA
Upstream 100 bases:
>100_bases CTCCCGATCCGCTACGGGAAGTCTGCCGGTTCGAGCAGCGGCGCCCCCGTTGGCAGCGCGTCGCACTGGACACTCGTTCG GCGGCATGCTATAATGCTGC
Downstream 100 bases:
>100_bases AACGATCCGCTATCGCCAAAGCCGCGGTGATCCGCTCTCTCATGCTCAACCCCGCGAACCATGAGGCGACGTAGAGAAGA GCCCGATCCCTATCCTGAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MLAKRSLSSVGRARALHAWGRGFESLSDHQQPQGFTGSGSLAGACALTRLVGRVPRCGADPMAAWKKASTFRAASSHSLS SACADRFAVIVTVERPRAFCVTVSETPSRPGVGTAAEGCGMALIVTLPVPLRVRCRCFPPALVPSRGPSQPTLRPELRCL VP
Sequences:
>Translated_162_residues MLAKRSLSSVGRARALHAWGRGFESLSDHQQPQGFTGSGSLAGACALTRLVGRVPRCGADPMAAWKKASTFRAASSHSLS SACADRFAVIVTVERPRAFCVTVSETPSRPGVGTAAEGCGMALIVTLPVPLRVRCRCFPPALVPSRGPSQPTLRPELRCL VP >Mature_162_residues MLAKRSLSSVGRARALHAWGRGFESLSDHQQPQGFTGSGSLAGACALTRLVGRVPRCGADPMAAWKKASTFRAASSHSLS SACADRFAVIVTVERPRAFCVTVSETPSRPGVGTAAEGCGMALIVTLPVPLRVRCRCFPPALVPSRGPSQPTLRPELRCL VP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17053; Mature: 17053
Theoretical pI: Translated: 11.47; Mature: 11.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 4.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAKRSLSSVGRARALHAWGRGFESLSDHQQPQGFTGSGSLAGACALTRLVGRVPRCGAD CCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC PMAAWKKASTFRAASSHSLSSACADRFAVIVTVERPRAFCVTVSETPSRPGVGTAAEGCG HHHHHHHHHHHHCCCCCCHHHHHHCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCC MALIVTLPVPLRVRCRCFPPALVPSRGPSQPTLRPELRCLVP EEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEECC >Mature Secondary Structure MLAKRSLSSVGRARALHAWGRGFESLSDHQQPQGFTGSGSLAGACALTRLVGRVPRCGAD CCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC PMAAWKKASTFRAASSHSLSSACADRFAVIVTVERPRAFCVTVSETPSRPGVGTAAEGCG HHHHHHHHHHHHCCCCCCHHHHHHCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCC MALIVTLPVPLRVRCRCFPPALVPSRGPSQPTLRPELRCLVP EEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA