Click here to switch to the map view.

The map label for this gene is yneN [H]

Identifier: 51893690

GI number: 51893690

Start: 2735872

End: 2736507

Strand: Reverse

Name: yneN [H]

Synonym: STH2552

Alternate gene names: 51893690

Gene position: 2736507-2735872 (Counterclockwise)

Preceding gene: 51893694

Following gene: 51893689

Centisome position: 76.74

GC content: 70.44

Gene sequence:

>636_bases
ATGAGCGTCTCGGCGAAGCCGGGAGCGGCGCGGCGCCCCGCACAGGCCGTGGTCCTGCTCGTGCTCGCCTTGTTGCTCGC
CGGCTGCGGCGGGCTGCAGCGGGATGCGGGCGCGGCCGGCGCCGGGTCCCGGTCCGGCGCACAGGCGGGGGGGAGCGCCG
CGGATCAGGGTACGGTCCTGGAGGTGAAGCCGGTTCCGGGCTACCTCGCCGCGGACATCCGGGCCAAGGACGTCTTCACC
GGTGAGGTTCTGACGCTCTCGGACCTGAAGGGCACGCCGGTGCTGCTCAACTTCTGGGCGACCTGGTGCGGCCCCTGCAG
GGAAGAGATGCCGGAGATGGAGGAGTTCCACCAGGAGATGGGCGATGCGGTCCGCGTGGTGGCGGTGAGCGCCGACTCCG
GGGACTCGCCGGAGAAGATGGCCGCCTTCGCCGAGGCGCTGGGCCTGACCTTCTCCGTCGTCCACGACGGGGGCAGCGCT
GCCCGGGCCTACCGGGTGGGGGCGATCCCGACCTCCTTCTTCATCGACGGGGAGGGTGTGATCCAGGTGCGCTACACCGG
TCCGCTCACCCTGGAGCAGATGAAGGAGTATGCCGAACTGGCCTCGAACACAGCAGAGGATCCGGAACATCCGTAA

Upstream 100 bases:

>100_bases
GGCGAACAATTAAGAATCCTAAGAGGAGGTCCGGGCCTGGCGGCTGTGGTATACTGGTCCCAAATCCACGTCGTCAGAAC
CGGGGAGTGGGGGATGCGGG

Downstream 100 bases:

>100_bases
TCCCAACGGGAGAGGATCGTAGCAGGGCATGACCTGGCTGCAGGGGTTTCTCCGGAGCGTCGCCCACGACCGCCGCTGGT
GGTGGGCGTTGCTCGTCATC

Product: thiol-disulfide isomerase and thioredoxins

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 211; Mature: 210

Protein sequence:

>211_residues
MSVSAKPGAARRPAQAVVLLVLALLLAGCGGLQRDAGAAGAGSRSGAQAGGSAADQGTVLEVKPVPGYLAADIRAKDVFT
GEVLTLSDLKGTPVLLNFWATWCGPCREEMPEMEEFHQEMGDAVRVVAVSADSGDSPEKMAAFAEALGLTFSVVHDGGSA
ARAYRVGAIPTSFFIDGEGVIQVRYTGPLTLEQMKEYAELASNTAEDPEHP

Sequences:

>Translated_211_residues
MSVSAKPGAARRPAQAVVLLVLALLLAGCGGLQRDAGAAGAGSRSGAQAGGSAADQGTVLEVKPVPGYLAADIRAKDVFT
GEVLTLSDLKGTPVLLNFWATWCGPCREEMPEMEEFHQEMGDAVRVVAVSADSGDSPEKMAAFAEALGLTFSVVHDGGSA
ARAYRVGAIPTSFFIDGEGVIQVRYTGPLTLEQMKEYAELASNTAEDPEHP
>Mature_210_residues
SVSAKPGAARRPAQAVVLLVLALLLAGCGGLQRDAGAAGAGSRSGAQAGGSAADQGTVLEVKPVPGYLAADIRAKDVFTG
EVLTLSDLKGTPVLLNFWATWCGPCREEMPEMEEFHQEMGDAVRVVAVSADSGDSPEKMAAFAEALGLTFSVVHDGGSAA
RAYRVGAIPTSFFIDGEGVIQVRYTGPLTLEQMKEYAELASNTAEDPEHP

Specific function: Involved In Disulfide Bond Formation. Catalyzes A Late, Reductive Step In The Assembly Of Periplasmic C-Type Cytochromes, Probably The Reduction Of Disulfide Bonds Of The Apocytochrome C To Allow Covalent Linkage With The Heme. Possible Subunit Of A Heme

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

Organism=Escherichia coli, GI1788523, Length=131, Percent_Identity=32.0610687022901, Blast_Score=65, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000866
- InterPro:   IPR005746
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00578 AhpC-TSA [H]

EC number: NA

Molecular weight: Translated: 21879; Mature: 21748

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00194 THIOREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVSAKPGAARRPAQAVVLLVLALLLAGCGGLQRDAGAAGAGSRSGAQAGGSAADQGTVL
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
EVKPVPGYLAADIRAKDVFTGEVLTLSDLKGTPVLLNFWATWCGPCREEMPEMEEFHQEM
EEECCCCEEECCCCCCCEECCCEEEECCCCCCCHHHHHHHHHCCHHHHHCHHHHHHHHHH
GDAVRVVAVSADSGDSPEKMAAFAEALGLTFSVVHDGGSAARAYRVGAIPTSFFIDGEGV
CCEEEEEEEECCCCCCHHHHHHHHHHHCCEEEEEECCCCHHHEEEECCCCCEEEECCCCE
IQVRYTGPLTLEQMKEYAELASNTAEDPEHP
EEEEECCCCCHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SVSAKPGAARRPAQAVVLLVLALLLAGCGGLQRDAGAAGAGSRSGAQAGGSAADQGTVL
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
EVKPVPGYLAADIRAKDVFTGEVLTLSDLKGTPVLLNFWATWCGPCREEMPEMEEFHQEM
EEECCCCEEECCCCCCCEECCCEEEECCCCCCCHHHHHHHHHCCHHHHHCHHHHHHHHHH
GDAVRVVAVSADSGDSPEKMAAFAEALGLTFSVVHDGGSAARAYRVGAIPTSFFIDGEGV
CCEEEEEEEECCCCCCHHHHHHHHHHHCCEEEEEECCCCHHHEEEECCCCCEEEECCCCE
IQVRYTGPLTLEQMKEYAELASNTAEDPEHP
EEEEECCCCCHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]