| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is tauC [H]
Identifier: 51893654
GI number: 51893654
Start: 2700903
End: 2701664
Strand: Reverse
Name: tauC [H]
Synonym: STH2516
Alternate gene names: 51893654
Gene position: 2701664-2700903 (Counterclockwise)
Preceding gene: 51893655
Following gene: 51893653
Centisome position: 75.76
GC content: 68.24
Gene sequence:
>762_bases GTGCCTAGGTACCGCTGGTATCATTACGCCGTCGCCCTGGCCATCCTCGCCCTGGCTTGGGAAGGGCTGGCCATCTGGCT CAACATCTGGCGGGGCGTCGCCGCCTTCCCCCGGCTGGGCCCGGCCGTGGCCGCCTTCCTCGAAGGGGTGAAGCCCGGCG GGCCGCTGGTGGAGCACTTCCTCGCCTCCGCTTACCGGGTCATCGCCTCGACCCTGATCTCCCTGGCCCTCGGGGTACCT CTCGGGCTCTACCTGGGCCGCTCGGGAGGCCCGGTGGGATCGGTGCTGGTCTACCTGACCTACCCGGTGCCCAAGGTGGT CTTCCTGCCGGTGATCATGGTCGTGCTGGGGATCGGCGACGAGTCCAAGATCTTCCTGATCACGCTGGTCATCTTCTTCC AGATCCTCGTCACCGTGAAGGACGCCGCTGCGAACGTCCCCCGCGGGCTGATCCGGTCGGTCCAGTCCCTCGGCGGCGGG GAGGCGCAGATCTACCGCCATGTCATCCTGCCGGCGGCGCTGCCCGCCATCTTCACGGCGCTGCGGCTGAGCACGGGCAC CGCCGTGGCCGTCCTGTTCTTTGCCGAGACCTACGCCACCCGCCGGGGGTTGGGGTCGTACGTGTGGGACGCCTGGTCGA TGCACGCGTACAGCAAGATGTTCGCCGGGGTCATGGCGATGGCGCTGATGGGATTCGGCTTCTACGTGGTGCTGGACATC GCCGAGCGGTACCTGTGCCCCTGGGCCGAGAAGCAGCGGTGA
Upstream 100 bases:
>100_bases GACCTGTTCGCAAACCCCGCCGTGGGTGACCGGCGGGCCGACGCGTTCCACAGCATGGTCAACCGCGTGCGCGACGCCCT GGAGAAGGGGGTGAACGGCG
Downstream 100 bases:
>100_bases ACGGCCGGTCGGGTCGCGCGGGGCGATGGGCGGCGGCACGGCCGTGCGAATGCAGATGAACTGAGGAGGCGTTCTGATGG CCCCTGGCTACCAGCCTCCG
Product: ABC transporter permease protein
Products: taurine [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 253; Mature: 252
Protein sequence:
>253_residues MPRYRWYHYAVALAILALAWEGLAIWLNIWRGVAAFPRLGPAVAAFLEGVKPGGPLVEHFLASAYRVIASTLISLALGVP LGLYLGRSGGPVGSVLVYLTYPVPKVVFLPVIMVVLGIGDESKIFLITLVIFFQILVTVKDAAANVPRGLIRSVQSLGGG EAQIYRHVILPAALPAIFTALRLSTGTAVAVLFFAETYATRRGLGSYVWDAWSMHAYSKMFAGVMAMALMGFGFYVVLDI AERYLCPWAEKQR
Sequences:
>Translated_253_residues MPRYRWYHYAVALAILALAWEGLAIWLNIWRGVAAFPRLGPAVAAFLEGVKPGGPLVEHFLASAYRVIASTLISLALGVP LGLYLGRSGGPVGSVLVYLTYPVPKVVFLPVIMVVLGIGDESKIFLITLVIFFQILVTVKDAAANVPRGLIRSVQSLGGG EAQIYRHVILPAALPAIFTALRLSTGTAVAVLFFAETYATRRGLGSYVWDAWSMHAYSKMFAGVMAMALMGFGFYVVLDI AERYLCPWAEKQR >Mature_252_residues PRYRWYHYAVALAILALAWEGLAIWLNIWRGVAAFPRLGPAVAAFLEGVKPGGPLVEHFLASAYRVIASTLISLALGVPL GLYLGRSGGPVGSVLVYLTYPVPKVVFLPVIMVVLGIGDESKIFLITLVIFFQILVTVKDAAANVPRGLIRSVQSLGGGE AQIYRHVILPAALPAIFTALRLSTGTAVAVLFFAETYATRRGLGSYVWDAWSMHAYSKMFAGVMAMALMGFGFYVVLDIA ERYLCPWAEKQR
Specific function: Part of a binding-protein-dependent transport system for taurine. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0600
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786564, Length=240, Percent_Identity=32.9166666666667, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI87081802, Length=146, Percent_Identity=29.4520547945205, Blast_Score=70, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 27537; Mature: 27406
Theoretical pI: Translated: 9.94; Mature: 9.94
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRYRWYHYAVALAILALAWEGLAIWLNIWRGVAAFPRLGPAVAAFLEGVKPGGPLVEHF CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHH LASAYRVIASTLISLALGVPLGLYLGRSGGPVGSVLVYLTYPVPKVVFLPVIMVVLGIGD HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHEEEECCCHHHHHHHHHHHHHCCCC ESKIFLITLVIFFQILVTVKDAAANVPRGLIRSVQSLGGGEAQIYRHVILPAALPAIFTA CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH LRLSTGTAVAVLFFAETYATRRGLGSYVWDAWSMHAYSKMFAGVMAMALMGFGFYVVLDI HHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AERYLCPWAEKQR HHHHCCCCCCCCC >Mature Secondary Structure PRYRWYHYAVALAILALAWEGLAIWLNIWRGVAAFPRLGPAVAAFLEGVKPGGPLVEHF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHH LASAYRVIASTLISLALGVPLGLYLGRSGGPVGSVLVYLTYPVPKVVFLPVIMVVLGIGD HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHEEEECCCHHHHHHHHHHHHHCCCC ESKIFLITLVIFFQILVTVKDAAANVPRGLIRSVQSLGGGEAQIYRHVILPAALPAIFTA CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH LRLSTGTAVAVLFFAETYATRRGLGSYVWDAWSMHAYSKMFAGVMAMALMGFGFYVVLDI HHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AERYLCPWAEKQR HHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: taurine [Periplasm]; ATP; H2O [C]
Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8808933; 9278503 [H]