| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51893648
Identifier: 51893648
GI number: 51893648
Start: 2695413
End: 2697326
Strand: Reverse
Name: 51893648
Synonym: STH2510
Alternate gene names: NA
Gene position: 2697326-2695413 (Counterclockwise)
Preceding gene: 51893651
Following gene: 51893646
Centisome position: 75.64
GC content: 76.12
Gene sequence:
>1914_bases ATGAGGACAAAGGATGTTCTTACCTGGACCGTGATCATCGGGACGGGGATCGGCGCGTTCTGGGACGGCTTCTACGCGCC CGGGCAGCAGATGGTCGCCGTCGCCTTGTCTGCTCTGCTGTCCCTTGCCGCGCCGTCCATCCAACTCGGCCGCGCGGAGG GCGCCGCCCTGCTGCTGATGGTGTCCGGGACCGCAGCCTCGCTCGCGCGCCCCGCGGCCGCCGGGGCCGCCGCACACGGG CCCGTCCTGGTCGCCGGATGGATCCTCGCGCTGATCGCCGGCCGGGCATGGGGCGCACACCGGCCGGAGCAGGCCGCGGG CGCCCTGGCCCGCTTCTGGGCCGTGACAGGCGCCCTCATGGCTTTCGGCGGGCTCCTGTTCATCTCCTTCACCCCGCCGC ACCATTCGGGCCGGCTGGCTTCTTTCCTGGGCTATCCCATCGCCGTGGGCATGATCGGGCTCCTGGGGCTGGCGGGGTCG CTGCCGGACCTGGCCGCCGGGCGCATCTGGGCCGCGCCGCTGGCCATGGGCGGCGCCCTCGGGTTTCTGCTGTCCGGATC CCGGGGCGTGTGGCTGGTCGGGCTGCTGCTGGCCGGGTTCCTCTGCTGGGCGGCGCCGGCCCTCGTGCGCGCCTGCCTGC CCCGGACAGGCCGGGCGCTCGCCGCTGCCCTGGCCGCCGCAGTCTGGGCGGCACCCGCGGTGCAGCAGCACGACGCGCCC CGCCTGTGGCCGATCGTGGCGCTCGCCCTATTGACGCTGGTTTTCACCGAACAGTTCCAACATGTGCGCGCGGTGCGCGC CGCATTCGCCGCCGCGACCGGGCTGGCGTTGCTCACCGCCCCGGGATGGGGCTGGTTCCTGGGCCGCGCCGCGACCCTCC CCCTGACCGACACCTCATCCGCGGAGCGGCTGGCCTTCCTCCGGGACGGCCTCGCCCTGGCGGCGGACCTGCCCCTGGGA GCGGGCTACCGGGCCTGGACGGCCCTGCACCTGCAGGCGGCCAGCTACGGCTACTACTCGGCGGAGGTCCACTCGGCGCC CCTGGACATCGCCCTGGCCTTCGGCTGGGCGGGCGCGGCCGGGTTTGCGCTGCTCGCGGCGGGCTTCCTCCTGCGGCTGC GGCGTGCCAGGGGGTGGGGCTGGTCCCGCACCGTCGCGTTGGGGGGGCTCGGCGCCCTGCTGCTGCACGCGCTGGTGGAC TGGGAGCTGAGCTACGCGCTCTTCGCGTTTCCGCTCTGGTTCGGGTTCGGCCTCGTTGGCGGACCTGCGGCGGAGGCGGG CCCGCGGTCGGCCGGCCGGGCACTTCCCTGGCCACGGGCCCTGACGGCGCTCCTGGCCGGCGTCGCCCTGGCCGGGGCGG TCCTGCTCGGGGCCGGCGACGGCCTGACCGAGCTGGCGGCCCGGAGCCTGGGCCGCGGCGCGCCGGAGGCGGCTCTGCGC CACGCGGGGGCCGCCGCGGCGCTGACGCCGTGGAACGACCTGACGCAAGCCTACCGCGGCGCCGCACTCGCGCAGCTGGG CCGGGGGGAGGAGGCGCTGGCCGCGCTGGCCCGGGCGCGACAGCTGGGGCCGTACGAACCCTGGTACGCGCAGATGGCCG CGACGGAGCTGGGCCGGCAGGGGCGGTGGCTGGAGGCCGCCGCCGCGTGGACCGATTACGTGCGACTGTGGCCGTGGGAG ACGGAGGCCTACGCCGAGGCGGTCGCGGCCCACCTCCGGTACCTGGACCGGGCGCAGGCGTCCGGCGATCGGGGGGCGGC GGCCCTGCTGGCCGAGAGCGGGCAGCGGCTGCTGGCGGCCCTTGCGGAGCAGAAGGCCCGGGAACCCGCCGATGCGCCCC GCAGGGGGATGGACGTGGAACGGCCGGTCTTTGCCGAGGCCCGCGAACGGTTTGCCGCCGTCCTGACGCGCTGA
Upstream 100 bases:
>100_bases GCGCGGGCGCATCGGGGTAGTGGATGTGCTGGTACAAGCCGCTCCCTCCGTTTCACAGAAGCCGTAGGCGTTGGGTCCCG CCGCGGCGAATGAAGACCGT
Downstream 100 bases:
>100_bases TGCGCCGCCGGGGGCGGCGCATCTCGCGTGGGAATCACCCGTTGCGCCTGGCGGCGGCCTGGTGGTCCGCCGCCAGCTCG TTGTGCTGCAGGATCAGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 637; Mature: 637
Protein sequence:
>637_residues MRTKDVLTWTVIIGTGIGAFWDGFYAPGQQMVAVALSALLSLAAPSIQLGRAEGAALLLMVSGTAASLARPAAAGAAAHG PVLVAGWILALIAGRAWGAHRPEQAAGALARFWAVTGALMAFGGLLFISFTPPHHSGRLASFLGYPIAVGMIGLLGLAGS LPDLAAGRIWAAPLAMGGALGFLLSGSRGVWLVGLLLAGFLCWAAPALVRACLPRTGRALAAALAAAVWAAPAVQQHDAP RLWPIVALALLTLVFTEQFQHVRAVRAAFAAATGLALLTAPGWGWFLGRAATLPLTDTSSAERLAFLRDGLALAADLPLG AGYRAWTALHLQAASYGYYSAEVHSAPLDIALAFGWAGAAGFALLAAGFLLRLRRARGWGWSRTVALGGLGALLLHALVD WELSYALFAFPLWFGFGLVGGPAAEAGPRSAGRALPWPRALTALLAGVALAGAVLLGAGDGLTELAARSLGRGAPEAALR HAGAAAALTPWNDLTQAYRGAALAQLGRGEEALAALARARQLGPYEPWYAQMAATELGRQGRWLEAAAAWTDYVRLWPWE TEAYAEAVAAHLRYLDRAQASGDRGAAALLAESGQRLLAALAEQKAREPADAPRRGMDVERPVFAEARERFAAVLTR
Sequences:
>Translated_637_residues MRTKDVLTWTVIIGTGIGAFWDGFYAPGQQMVAVALSALLSLAAPSIQLGRAEGAALLLMVSGTAASLARPAAAGAAAHG PVLVAGWILALIAGRAWGAHRPEQAAGALARFWAVTGALMAFGGLLFISFTPPHHSGRLASFLGYPIAVGMIGLLGLAGS LPDLAAGRIWAAPLAMGGALGFLLSGSRGVWLVGLLLAGFLCWAAPALVRACLPRTGRALAAALAAAVWAAPAVQQHDAP RLWPIVALALLTLVFTEQFQHVRAVRAAFAAATGLALLTAPGWGWFLGRAATLPLTDTSSAERLAFLRDGLALAADLPLG AGYRAWTALHLQAASYGYYSAEVHSAPLDIALAFGWAGAAGFALLAAGFLLRLRRARGWGWSRTVALGGLGALLLHALVD WELSYALFAFPLWFGFGLVGGPAAEAGPRSAGRALPWPRALTALLAGVALAGAVLLGAGDGLTELAARSLGRGAPEAALR HAGAAAALTPWNDLTQAYRGAALAQLGRGEEALAALARARQLGPYEPWYAQMAATELGRQGRWLEAAAAWTDYVRLWPWE TEAYAEAVAAHLRYLDRAQASGDRGAAALLAESGQRLLAALAEQKAREPADAPRRGMDVERPVFAEARERFAAVLTR >Mature_637_residues MRTKDVLTWTVIIGTGIGAFWDGFYAPGQQMVAVALSALLSLAAPSIQLGRAEGAALLLMVSGTAASLARPAAAGAAAHG PVLVAGWILALIAGRAWGAHRPEQAAGALARFWAVTGALMAFGGLLFISFTPPHHSGRLASFLGYPIAVGMIGLLGLAGS LPDLAAGRIWAAPLAMGGALGFLLSGSRGVWLVGLLLAGFLCWAAPALVRACLPRTGRALAAALAAAVWAAPAVQQHDAP RLWPIVALALLTLVFTEQFQHVRAVRAAFAAATGLALLTAPGWGWFLGRAATLPLTDTSSAERLAFLRDGLALAADLPLG AGYRAWTALHLQAASYGYYSAEVHSAPLDIALAFGWAGAAGFALLAAGFLLRLRRARGWGWSRTVALGGLGALLLHALVD WELSYALFAFPLWFGFGLVGGPAAEAGPRSAGRALPWPRALTALLAGVALAGAVLLGAGDGLTELAARSLGRGAPEAALR HAGAAAALTPWNDLTQAYRGAALAQLGRGEEALAALARARQLGPYEPWYAQMAATELGRQGRWLEAAAAWTDYVRLWPWE TEAYAEAVAAHLRYLDRAQASGDRGAAALLAESGQRLLAALAEQKAREPADAPRRGMDVERPVFAEARERFAAVLTR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 66167; Mature: 66167
Theoretical pI: Translated: 10.22; Mature: 10.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTKDVLTWTVIIGTGIGAFWDGFYAPGQQMVAVALSALLSLAAPSIQLGRAEGAALLLM CCCCHHEEEEEEECCCHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEECCCCCCEEEEE VSGTAASLARPAAAGAAAHGPVLVAGWILALIAGRAWGAHRPEQAAGALARFWAVTGALM ECCCHHHHHCCHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH AFGGLLFISFTPPHHSGRLASFLGYPIAVGMIGLLGLAGSLPDLAAGRIWAAPLAMGGAL HHCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCHHHHHHHHHHHH GFLLSGSRGVWLVGLLLAGFLCWAAPALVRACLPRTGRALAAALAAAVWAAPAVQQHDAP HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHCCCCC RLWPIVALALLTLVFTEQFQHVRAVRAAFAAATGLALLTAPGWGWFLGRAATLPLTDTSS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHEEECCCCHHHHCCCEECCCCCCCC AERLAFLRDGLALAADLPLGAGYRAWTALHLQAASYGYYSAEVHSAPLDIALAFGWAGAA HHHHHHHHCCHHHEECCCCCCCHHHHHHHEEEHHHCCCEEEECCCCCCEEEEEECCHHHH GFALLAAGFLLRLRRARGWGWSRTVALGGLGALLLHALVDWELSYALFAFPLWFGFGLVG HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GPAAEAGPRSAGRALPWPRALTALLAGVALAGAVLLGAGDGLTELAARSLGRGAPEAALR CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHH HAGAAAALTPWNDLTQAYRGAALAQLGRGEEALAALARARQLGPYEPWYAQMAATELGRQ HCCCCCEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCC GRWLEAAAAWTDYVRLWPWETEAYAEAVAAHLRYLDRAQASGDRGAAALLAESGQRLLAA CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH LAEQKAREPADAPRRGMDVERPVFAEARERFAAVLTR HHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MRTKDVLTWTVIIGTGIGAFWDGFYAPGQQMVAVALSALLSLAAPSIQLGRAEGAALLLM CCCCHHEEEEEEECCCHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEECCCCCCEEEEE VSGTAASLARPAAAGAAAHGPVLVAGWILALIAGRAWGAHRPEQAAGALARFWAVTGALM ECCCHHHHHCCHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH AFGGLLFISFTPPHHSGRLASFLGYPIAVGMIGLLGLAGSLPDLAAGRIWAAPLAMGGAL HHCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCHHHHHHHHHHHH GFLLSGSRGVWLVGLLLAGFLCWAAPALVRACLPRTGRALAAALAAAVWAAPAVQQHDAP HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHCCCCC RLWPIVALALLTLVFTEQFQHVRAVRAAFAAATGLALLTAPGWGWFLGRAATLPLTDTSS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHEEECCCCHHHHCCCEECCCCCCCC AERLAFLRDGLALAADLPLGAGYRAWTALHLQAASYGYYSAEVHSAPLDIALAFGWAGAA HHHHHHHHCCHHHEECCCCCCCHHHHHHHEEEHHHCCCEEEECCCCCCEEEEEECCHHHH GFALLAAGFLLRLRRARGWGWSRTVALGGLGALLLHALVDWELSYALFAFPLWFGFGLVG HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GPAAEAGPRSAGRALPWPRALTALLAGVALAGAVLLGAGDGLTELAARSLGRGAPEAALR CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHH HAGAAAALTPWNDLTQAYRGAALAQLGRGEEALAALARARQLGPYEPWYAQMAATELGRQ HCCCCCEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCC GRWLEAAAAWTDYVRLWPWETEAYAEAVAAHLRYLDRAQASGDRGAAALLAESGQRLLAA CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH LAEQKAREPADAPRRGMDVERPVFAEARERFAAVLTR HHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA