| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51893600
Identifier: 51893600
GI number: 51893600
Start: 2647933
End: 2648469
Strand: Reverse
Name: 51893600
Synonym: STH2462
Alternate gene names: NA
Gene position: 2648469-2647933 (Counterclockwise)
Preceding gene: 51893601
Following gene: 51893599
Centisome position: 74.27
GC content: 65.92
Gene sequence:
>537_bases GTGAGCGGTGACCGGTCGTCTTTGCGCCCCGAGGGAGGGGGGGCGAGCGTCGGCGCTGTGCCCAGACGGTGGATCGTGGT GGCGTGCGCGGTGCTGGCGGCCCTTGCCGCAGGGATCGTGTGGGTGTACACGCACCCGCCGCTGCAAAGCACCGGTATGC ACACGCGCGTGGATGACCAGCGCATGCCCGTGGCGTATGGGTTTGACCTGGAAAACACCGGTCGGTGGCCGATCACGCTG GTAGCGGTGAAGGTTGACGGGCAGGAGATCTTGCCTCCGTTTGCGATCGCCGTGTCGAACTTCACCGAAGGCCACCTGGC GGGCAGCGCGGCGATCGCGCTGGAGACCTATGGGCACAAGCTGACCACAGGCCCGGTGTATGGCTGGAAGATGCAGCCGG AGCGATACACAGGACACGCTCGGTACGCCGTCCGATTGGGCACGCGCGGGTTGCCTCCGGCACACGAGAAGATCATCCTT CACCACCGCTACCTCGGGTTGCCGCTAAGGCACGACCTTACGCCCTGGATATGGTGA
Upstream 100 bases:
>100_bases CCGGGCGCTGCTGCGGGATTGATGTGAGCGGTCGCGGAGGCGAGCCGCGAGGGCGAGCGGTGAGCGCCGACCCGCTGGCT GTGGGGAGGGCCCGCAGGCA
Downstream 100 bases:
>100_bases TGCGGGGTGTTCGGCTCAGGAGGACACCTGACGATGCGCAACCAGGACGCAGCTGGAGCGGCGTCCTGGTTTTCACGTAT TCCTGGGCCGCACAGCTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 178; Mature: 177
Protein sequence:
>178_residues MSGDRSSLRPEGGGASVGAVPRRWIVVACAVLAALAAGIVWVYTHPPLQSTGMHTRVDDQRMPVAYGFDLENTGRWPITL VAVKVDGQEILPPFAIAVSNFTEGHLAGSAAIALETYGHKLTTGPVYGWKMQPERYTGHARYAVRLGTRGLPPAHEKIIL HHRYLGLPLRHDLTPWIW
Sequences:
>Translated_178_residues MSGDRSSLRPEGGGASVGAVPRRWIVVACAVLAALAAGIVWVYTHPPLQSTGMHTRVDDQRMPVAYGFDLENTGRWPITL VAVKVDGQEILPPFAIAVSNFTEGHLAGSAAIALETYGHKLTTGPVYGWKMQPERYTGHARYAVRLGTRGLPPAHEKIIL HHRYLGLPLRHDLTPWIW >Mature_177_residues SGDRSSLRPEGGGASVGAVPRRWIVVACAVLAALAAGIVWVYTHPPLQSTGMHTRVDDQRMPVAYGFDLENTGRWPITLV AVKVDGQEILPPFAIAVSNFTEGHLAGSAAIALETYGHKLTTGPVYGWKMQPERYTGHARYAVRLGTRGLPPAHEKIILH HRYLGLPLRHDLTPWIW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19506; Mature: 19375
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGDRSSLRPEGGGASVGAVPRRWIVVACAVLAALAAGIVWVYTHPPLQSTGMHTRVDDQ CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCEEECCCC RMPVAYGFDLENTGRWPITLVAVKVDGQEILPPFAIAVSNFTEGHLAGSAAIALETYGHK CCCEEECCCCCCCCCCEEEEEEEEECCHHHCCCEEEEECCCCCCCCCCCEEEEEEECCCE LTTGPVYGWKMQPERYTGHARYAVRLGTRGLPPAHEKIILHHRYLGLPLRHDLTPWIW EECCCEECEEECCHHCCCCEEEEEEECCCCCCCCHHEEEEEHHEECCCCCCCCCCCCC >Mature Secondary Structure SGDRSSLRPEGGGASVGAVPRRWIVVACAVLAALAAGIVWVYTHPPLQSTGMHTRVDDQ CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCEEECCCC RMPVAYGFDLENTGRWPITLVAVKVDGQEILPPFAIAVSNFTEGHLAGSAAIALETYGHK CCCEEECCCCCCCCCCEEEEEEEEECCHHHCCCEEEEECCCCCCCCCCCEEEEEEECCCE LTTGPVYGWKMQPERYTGHARYAVRLGTRGLPPAHEKIILHHRYLGLPLRHDLTPWIW EECCCEECEEECCHHCCCCEEEEEEECCCCCCCCHHEEEEEHHEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA