| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51893584
Identifier: 51893584
GI number: 51893584
Start: 2633703
End: 2634080
Strand: Reverse
Name: 51893584
Synonym: STH2446
Alternate gene names: NA
Gene position: 2634080-2633703 (Counterclockwise)
Preceding gene: 51893585
Following gene: 51893583
Centisome position: 73.86
GC content: 68.78
Gene sequence:
>378_bases ATGCGCTTGCGTGAACCCGTCGTCGCGATCGTGGGCGTGTGCGCGGCAGGGAAGACTACGCTGGCAGCGGGCCTGAACGC GGCGGGAATCCGGGCGTACAGCGTCCCCCAGGAGCACTCGGTGGTGCGGCGGCTCTGGAAGCACCTGCATCCGGACGCGA ACATCCTGGTGATGCTGGATGCCCGCTGGGAGACCGCCCGCCGCCGGCGGCCTGAGATCCGCTACGGGCCTGAGCGGCTG GAGGAGCAGCGCAGGCGGCTGGCTTACGCCCGGGCGGAATGCGACCTGTACCTGCCCACCGACGACCTGAGCATCGAGGA CGTGCGCCAGCGGGTGCTGGCGTTTATCGAAACGTGGAAGGAGAAGGAGCGAACGTGA
Upstream 100 bases:
>100_bases GACGACATGGCGGTGCTGGCCGTGGGGGTGACCGCGGGAGGGGAGGACCGCATCCGCCGGATGAGCGTCACCATGGAGTG GTGAAGCCGATCGGGGAGGG
Downstream 100 bases:
>100_bases TGGCGCCTCCGCAGGAGGGCCCGGCGCCGGCCCGCAGGGGGCTGGTGCGGGAGATTCTGGAGACCGCCGCGCTGGCCCTG GTGGTCGCGCTGGTGGTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 125; Mature: 125
Protein sequence:
>125_residues MRLREPVVAIVGVCAAGKTTLAAGLNAAGIRAYSVPQEHSVVRRLWKHLHPDANILVMLDARWETARRRRPEIRYGPERL EEQRRRLAYARAECDLYLPTDDLSIEDVRQRVLAFIETWKEKERT
Sequences:
>Translated_125_residues MRLREPVVAIVGVCAAGKTTLAAGLNAAGIRAYSVPQEHSVVRRLWKHLHPDANILVMLDARWETARRRRPEIRYGPERL EEQRRRLAYARAECDLYLPTDDLSIEDVRQRVLAFIETWKEKERT >Mature_125_residues MRLREPVVAIVGVCAAGKTTLAAGLNAAGIRAYSVPQEHSVVRRLWKHLHPDANILVMLDARWETARRRRPEIRYGPERL EEQRRRLAYARAECDLYLPTDDLSIEDVRQRVLAFIETWKEKERT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14533; Mature: 14533
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLREPVVAIVGVCAAGKTTLAAGLNAAGIRAYSVPQEHSVVRRLWKHLHPDANILVMLD CCCCHHHHHHHHHHCCCCHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHCCCCCEEEEEE ARWETARRRRPEIRYGPERLEEQRRRLAYARAECDLYLPTDDLSIEDVRQRVLAFIETWK CCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCEEECCCCCCCHHHHHHHHHHHHHHHH EKERT HHCCC >Mature Secondary Structure MRLREPVVAIVGVCAAGKTTLAAGLNAAGIRAYSVPQEHSVVRRLWKHLHPDANILVMLD CCCCHHHHHHHHHHCCCCHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHCCCCCEEEEEE ARWETARRRRPEIRYGPERLEEQRRRLAYARAECDLYLPTDDLSIEDVRQRVLAFIETWK CCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCEEECCCCCCCHHHHHHHHHHHHHHHH EKERT HHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA