| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51893570
Identifier: 51893570
GI number: 51893570
Start: 2614958
End: 2615863
Strand: Reverse
Name: 51893570
Synonym: STH2432
Alternate gene names: NA
Gene position: 2615863-2614958 (Counterclockwise)
Preceding gene: 51893571
Following gene: 51893568
Centisome position: 73.35
GC content: 71.52
Gene sequence:
>906_bases GTGAATGGCAGGGCATGGCACCGGCGGCTCCCCTGGCTGGCCCTCGGGTTGGCGGGCCTGCTTGCGCTGGCGCCGGTCAC CGCGGCGGCCCCGGGCGGGCCGTCCGTCCTGCGGGTGCCGGACGACGCGGCCGACGTGGTGCGCAGGATCGAGCGGCTGA CCCGGTGGGCGCCGGGGGTGGTCAGCGTCTGGTACTACGACCTCTCCACCCACGAGACCTTCGGGGTGCGGGCGGACGAG GTGTATACGGCGGCCAGCACGGTCAAGGTGCTGATCGCCAATTACCTCTACCACCTGGCGGCGACGGGGCAGGTGTCGCT GGACGAGCCGCTGGCCATCCGGGCGGTGGACTGGAAGGACGGATCGGGCATCCTCAACGGCGTGCCGGACGGGACCCGGC TGCCGCTGCGGGAGGTCGCGCGCCTGATGCTGGTGCACAGCGACAACACGGCCGCCAACGCCCTCATGCGCAGGCTCGGC GTCCAGCCCATGGTGCAGTATTACCGCAGCCTGGGCATCCGGTACGGCACCCCCCGGATGCACACCCCGGGGGAGCTGTG GGAGGGGAACCGCATCGCCCCCGAGGATCTGGGCATCGTCCTGCGCAATATCTGGGAGGCGGCCCGACGGTCCCCCGAAC CCTGGGAGGAGCTGCTGGGGTTCATGCGTGAGTCCAGGTCCAAGGGCCGGATCCCGGCCGGACTGCCTTCCCACGTGCCG ATGGCGAACAAGACGGGGTCCAAGGGGACGTCCTTTCACGACGCGGCCCTCGTCCTGGACCGGCGCCCCTACGTGCTGGT GGTGATGACACAGGGCATGACGGCGCGCCAGGCCAGCCACTACATCGCCGCCGTGTCCCGGGAGGTGTGGGAGTGGCATG TGCGCCGGGGCGTCCGGCGTCCGTGA
Upstream 100 bases:
>100_bases GCCTCTGGCTGAAGGCGCAGGCGCTGCTGGACACGGGGGACTAGCGCCGCGGGCCGGATCGCTTTCACCCGGGCGGGCAA CCTACCTGTGGTGATGGCTG
Downstream 100 bases:
>100_bases CCGGTCCGGAAAAGCCTGAAAGCCCGCCGGAGCGGCGGGCTTTCGGGTTATCCAAGGGGCGGGTGAGGGCAGGGTGCGTG TGCTGCCGCGTGTGGCGGAT
Product: putative beta-lactamase
Products: NA
Alternate protein names: Beta-Lactamase Class A-Like Protein; Beta-Lactamase Protein; Carboxylesterase; Beta-Lactamase Class A; Peptidase
Number of amino acids: Translated: 301; Mature: 301
Protein sequence:
>301_residues MNGRAWHRRLPWLALGLAGLLALAPVTAAAPGGPSVLRVPDDAADVVRRIERLTRWAPGVVSVWYYDLSTHETFGVRADE VYTAASTVKVLIANYLYHLAATGQVSLDEPLAIRAVDWKDGSGILNGVPDGTRLPLREVARLMLVHSDNTAANALMRRLG VQPMVQYYRSLGIRYGTPRMHTPGELWEGNRIAPEDLGIVLRNIWEAARRSPEPWEELLGFMRESRSKGRIPAGLPSHVP MANKTGSKGTSFHDAALVLDRRPYVLVVMTQGMTARQASHYIAAVSREVWEWHVRRGVRRP
Sequences:
>Translated_301_residues MNGRAWHRRLPWLALGLAGLLALAPVTAAAPGGPSVLRVPDDAADVVRRIERLTRWAPGVVSVWYYDLSTHETFGVRADE VYTAASTVKVLIANYLYHLAATGQVSLDEPLAIRAVDWKDGSGILNGVPDGTRLPLREVARLMLVHSDNTAANALMRRLG VQPMVQYYRSLGIRYGTPRMHTPGELWEGNRIAPEDLGIVLRNIWEAARRSPEPWEELLGFMRESRSKGRIPAGLPSHVP MANKTGSKGTSFHDAALVLDRRPYVLVVMTQGMTARQASHYIAAVSREVWEWHVRRGVRRP >Mature_301_residues MNGRAWHRRLPWLALGLAGLLALAPVTAAAPGGPSVLRVPDDAADVVRRIERLTRWAPGVVSVWYYDLSTHETFGVRADE VYTAASTVKVLIANYLYHLAATGQVSLDEPLAIRAVDWKDGSGILNGVPDGTRLPLREVARLMLVHSDNTAANALMRRLG VQPMVQYYRSLGIRYGTPRMHTPGELWEGNRIAPEDLGIVLRNIWEAARRSPEPWEELLGFMRESRSKGRIPAGLPSHVP MANKTGSKGTSFHDAALVLDRRPYVLVVMTQGMTARQASHYIAAVSREVWEWHVRRGVRRP
Specific function: Unknown
COG id: COG2367
COG function: function code V; Beta-lactamase class A
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33473; Mature: 33473
Theoretical pI: Translated: 10.48; Mature: 10.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGRAWHRRLPWLALGLAGLLALAPVTAAAPGGPSVLRVPDDAADVVRRIERLTRWAPGV CCCCCHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHHCCCCE VSVWYYDLSTHETFGVRADEVYTAASTVKVLIANYLYHLAATGQVSLDEPLAIRAVDWKD EEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCC GSGILNGVPDGTRLPLREVARLMLVHSDNTAANALMRRLGVQPMVQYYRSLGIRYGTPRM CCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCC HTPGELWEGNRIAPEDLGIVLRNIWEAARRSPEPWEELLGFMRESRSKGRIPAGLPSHVP CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC MANKTGSKGTSFHDAALVLDRRPYVLVVMTQGMTARQASHYIAAVSREVWEWHVRRGVRR CCCCCCCCCCCCCHHEEEECCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCC P C >Mature Secondary Structure MNGRAWHRRLPWLALGLAGLLALAPVTAAAPGGPSVLRVPDDAADVVRRIERLTRWAPGV CCCCCHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHHCCCCE VSVWYYDLSTHETFGVRADEVYTAASTVKVLIANYLYHLAATGQVSLDEPLAIRAVDWKD EEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCC GSGILNGVPDGTRLPLREVARLMLVHSDNTAANALMRRLGVQPMVQYYRSLGIRYGTPRM CCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCC HTPGELWEGNRIAPEDLGIVLRNIWEAARRSPEPWEELLGFMRESRSKGRIPAGLPSHVP CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC MANKTGSKGTSFHDAALVLDRRPYVLVVMTQGMTARQASHYIAAVSREVWEWHVRRGVRR CCCCCCCCCCCCCHHEEEECCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCC P C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA