Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is marR [C]

Identifier: 51893565

GI number: 51893565

Start: 2611656

End: 2612090

Strand: Reverse

Name: marR [C]

Synonym: STH2427

Alternate gene names: 51893565

Gene position: 2612090-2611656 (Counterclockwise)

Preceding gene: 51893566

Following gene: 51893564

Centisome position: 73.25

GC content: 68.05

Gene sequence:

>435_bases
ATGGAGTCTGCCCGCATCGAAGCCTATCTCCCGAAGCTGGAGGCCTCGTTCGACAACATGGTGCGTGTGATGACGGCGGC
GACGACGGCCTACCAGGAGGTAGCTCCGGGACCGCGAATGTCGATGAGCCAGATGATCGTGCTGAAGGCCCTGAAGGCCC
GCGGGCCGCTGCAGGTGACCGAGGTGGCCAACGAGCTGACGGTCACCCTCAGCGCGGCGACCGGTCTGGTGGACCGGCTG
GTGAAGGCGGGGTTCGCGGAGCGGGAGCGGGACCAGCGCGACCGGCGGGTGGTGTGGGTGAGGATCACCCCCGAGGGCGA
GCAGGCCCTGGAGGCGGCGATCCAGCGCCGCAGGGCCGCCTTCCGCGAGATGGTGAAGAACCTCACCGAAGCCGAGTTGG
AACAGCTCTGCGACATCCTCGGCCGGATGGGGTAA

Upstream 100 bases:

>100_bases
CGCCTTCTCGCGCGTCCTTGACACCGGTTTCCGGTTACGGGTATAATCCGGACAATCAAAAAATGTTAACGATGTGAATT
TCGGGCCCGGAGGTGTTCGA

Downstream 100 bases:

>100_bases
CCACTGGGAGGACTTGAACAAAAGCAAATAGAATATGTAGGACCATCGCTTGAACTGTGGGGGGTTCGCATATGGTCTTA
ACCGTCATCGGGCTCGCCCT

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MESARIEAYLPKLEASFDNMVRVMTAATTAYQEVAPGPRMSMSQMIVLKALKARGPLQVTEVANELTVTLSAATGLVDRL
VKAGFAERERDQRDRRVVWVRITPEGEQALEAAIQRRRAAFREMVKNLTEAELEQLCDILGRMG

Sequences:

>Translated_144_residues
MESARIEAYLPKLEASFDNMVRVMTAATTAYQEVAPGPRMSMSQMIVLKALKARGPLQVTEVANELTVTLSAATGLVDRL
VKAGFAERERDQRDRRVVWVRITPEGEQALEAAIQRRRAAFREMVKNLTEAELEQLCDILGRMG
>Mature_144_residues
MESARIEAYLPKLEASFDNMVRVMTAATTAYQEVAPGPRMSMSQMIVLKALKARGPLQVTEVANELTVTLSAATGLVDRL
VKAGFAERERDQRDRRVVWVRITPEGEQALEAAIQRRRAAFREMVKNLTEAELEQLCDILGRMG

Specific function: Repressor Of The Marrab Operon Which Is Involved In The Activation Of Both Antibiotic Resistance And Oxidative Stress Genes. Binds To The Maro Operator/Promoter Site. [C]

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16107; Mature: 16107

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESARIEAYLPKLEASFDNMVRVMTAATTAYQEVAPGPRMSMSQMIVLKALKARGPLQVT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHH
EVANELTVTLSAATGLVDRLVKAGFAERERDQRDRRVVWVRITPEGEQALEAAIQRRRAA
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHH
FREMVKNLTEAELEQLCDILGRMG
HHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MESARIEAYLPKLEASFDNMVRVMTAATTAYQEVAPGPRMSMSQMIVLKALKARGPLQVT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHH
EVANELTVTLSAATGLVDRLVKAGFAERERDQRDRRVVWVRITPEGEQALEAAIQRRRAA
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHH
FREMVKNLTEAELEQLCDILGRMG
HHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA