| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
Click here to switch to the map view.
The map label for this gene is 51893547
Identifier: 51893547
GI number: 51893547
Start: 2592343
End: 2592648
Strand: Reverse
Name: 51893547
Synonym: STH2409
Alternate gene names: NA
Gene position: 2592648-2592343 (Counterclockwise)
Preceding gene: 51893548
Following gene: 51893544
Centisome position: 72.7
GC content: 61.76
Gene sequence:
>306_bases GTGCCTTCTCCGGTCCCCGGATGCCAGCTGAACCCGGGATACTTGACACGTGAAGTGTCACTTTTCCGCAGCCTCCAGCG CAGCGCCCTGCGGATTCTTGCCACTTCACGTCTGAACGACCGCCCGGTGCCTTCCCCGGTCCCCGGATGCCAGCTGAACG CGGGACAGTTGACACGTGAAGTGTCATTTTTCCGTAGCCTTCAGCGCAGTGCCCTGCGGATTTTTTGCCACTTCACGTCT GAACGACCGCCCGGTGCCTTCCCCGGACCCCGGATGCCGGCTGAAGCCGGGATACTTGACATGTGA
Upstream 100 bases:
>100_bases ATCCGGAGCCGCTGCACGTTCTTGGATGACCATCCGGCCTCTTCCCAGGGTCCTGGATGCCAGCTGAATTCTTGCCACTT CACGTCTGAACGACCGCCCG
Downstream 100 bases:
>100_bases AGTGTCACTTTTCCGCAGCCTTCAGCGCAGTGCCCTGCGGATTTTTTGCCACTTCACGTCTGAACGACCGCCCGGTGCGT TCCCCGGTCCCCGGTTGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 101; Mature: 100
Protein sequence:
>101_residues MPSPVPGCQLNPGYLTREVSLFRSLQRSALRILATSRLNDRPVPSPVPGCQLNAGQLTREVSFFRSLQRSALRIFCHFTS ERPPGAFPGPRMPAEAGILDM
Sequences:
>Translated_101_residues MPSPVPGCQLNPGYLTREVSLFRSLQRSALRILATSRLNDRPVPSPVPGCQLNAGQLTREVSFFRSLQRSALRIFCHFTS ERPPGAFPGPRMPAEAGILDM >Mature_100_residues PSPVPGCQLNPGYLTREVSLFRSLQRSALRILATSRLNDRPVPSPVPGCQLNAGQLTREVSFFRSLQRSALRIFCHFTSE RPPGAFPGPRMPAEAGILDM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11136; Mature: 11005
Theoretical pI: Translated: 11.48; Mature: 11.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSPVPGCQLNPGYLTREVSLFRSLQRSALRILATSRLNDRPVPSPVPGCQLNAGQLTRE CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECHHHHHHH VSFFRSLQRSALRIFCHFTSERPPGAFPGPRMPAEAGILDM HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PSPVPGCQLNPGYLTREVSLFRSLQRSALRILATSRLNDRPVPSPVPGCQLNAGQLTRE CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECHHHHHHH VSFFRSLQRSALRIFCHFTSERPPGAFPGPRMPAEAGILDM HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA