| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51893521
Identifier: 51893521
GI number: 51893521
Start: 2569411
End: 2569788
Strand: Reverse
Name: 51893521
Synonym: STH2383
Alternate gene names: NA
Gene position: 2569788-2569411 (Counterclockwise)
Preceding gene: 51893523
Following gene: 51893514
Centisome position: 72.06
GC content: 62.43
Gene sequence:
>378_bases TTGTCTCACTCCCACGTGAACTTTCCTTCCGGACCGTCCGTAGGGATATACGAGAGAACCTGGAGGGAGCGGCCGGTGGA CGAGGGAAAGGTGTTCGATCAGTTCCTGCATCTGCCGGATGGATATCAGGCGCAGGTCATGGTGATGGCAGAACCGGTGA GCGGGCTCGAAGGGAAGGTGGCGTATCGCAGTCGGGTCTGGCTCGGGCACGAGGACGAGATGGATCCGTACCTGTACCGC ACGGAGGTGCACTGGGACTTGCAGGAAGCGATCCGCACCTGCTGGGCGATGCTGCGGCAGCTGGCGCCGCATTGCTTCCG GTCCCGGGCTGCGATTGAGGCGGTGAAGGGTGTTGACAGGAAGCTGCCGACCGGATAG
Upstream 100 bases:
>100_bases CACGATTCGTCCCCCTCATCGTTTACGATAACACCATTATAAGCGTATCCATTGTTAGGGGACAAGCACCGGAATGCTCC AGAGATGAAAGGGGCTGTAC
Downstream 100 bases:
>100_bases AATAACGGTGCGCTCAGCAAATGCAATACGGCACGGCGATGCAGCACGGACCGCTAGCTCAATTGGTAGAGCATCCGACT CTTAATCGGCAGGTTGTAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 125; Mature: 124
Protein sequence:
>125_residues MSHSHVNFPSGPSVGIYERTWRERPVDEGKVFDQFLHLPDGYQAQVMVMAEPVSGLEGKVAYRSRVWLGHEDEMDPYLYR TEVHWDLQEAIRTCWAMLRQLAPHCFRSRAAIEAVKGVDRKLPTG
Sequences:
>Translated_125_residues MSHSHVNFPSGPSVGIYERTWRERPVDEGKVFDQFLHLPDGYQAQVMVMAEPVSGLEGKVAYRSRVWLGHEDEMDPYLYR TEVHWDLQEAIRTCWAMLRQLAPHCFRSRAAIEAVKGVDRKLPTG >Mature_124_residues SHSHVNFPSGPSVGIYERTWRERPVDEGKVFDQFLHLPDGYQAQVMVMAEPVSGLEGKVAYRSRVWLGHEDEMDPYLYRT EVHWDLQEAIRTCWAMLRQLAPHCFRSRAAIEAVKGVDRKLPTG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14427; Mature: 14295
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHSHVNFPSGPSVGIYERTWRERPVDEGKVFDQFLHLPDGYQAQVMVMAEPVSGLEGKV CCCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCE AYRSRVWLGHEDEMDPYLYRTEVHWDLQEAIRTCWAMLRQLAPHCFRSRAAIEAVKGVDR EHHEEEECCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC KLPTG CCCCC >Mature Secondary Structure SHSHVNFPSGPSVGIYERTWRERPVDEGKVFDQFLHLPDGYQAQVMVMAEPVSGLEGKV CCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCE AYRSRVWLGHEDEMDPYLYRTEVHWDLQEAIRTCWAMLRQLAPHCFRSRAAIEAVKGVDR EHHEEEECCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC KLPTG CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA