| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is mhpC [C]
Identifier: 51893506
GI number: 51893506
Start: 2557769
End: 2558572
Strand: Reverse
Name: mhpC [C]
Synonym: STH2368
Alternate gene names: 51893506
Gene position: 2558572-2557769 (Counterclockwise)
Preceding gene: 51893507
Following gene: 51893504
Centisome position: 71.75
GC content: 73.63
Gene sequence:
>804_bases ATGGATCTCCGCCTCATCCGATGGCCGTCGCGCGCCGGCACCCTGGCCGTGCGCATGCGCGCAGGCGGAGGCCCGGAACC CGTCCTGCTCCTCCACGGGCTCGGGGCCTCCCACGTCTTCTTCCTGCCGGCCGCGGCCGGCAAGGCCCTGGCGGGGCGGG CGGTCATCCTTCCCGACCTGCCCGGACACGGCGACAGCGAGGATCCGGCAGGCTTCGCCTGTGCCATGGACGACCTGGCG GATCTCCTGATGGAGCTGCTGGACTGGCTGGGCCTCAGCAGGGTCAGCCTGGTGGGCCACAGCATGGGCGGCACCATCGC CATACTCATGGCTGAACGTGACCCCGGACGCTTCACGGGCCTGCTCTGCGCCGAGGGCAACCTGCGTCCGGAGGACGCCA CCCTGAGCCGCAGGCTGGCGGCGATGGGCGCGGAGGGCGTCCGGGCCGCGCTGCCGCGGCTGGTCGGGAAGTTCGCCGGG AGCGGCCTGGACGGCCGGGAGGACGATCTGCTCTACGCCGCCACCCTCAGCCGGTGCGCGCCCGACGTGCTGTGGCGGTA CGCCGCCGGGCTGGTCCGGACCTCCGACACGCCGGGGCTGCTGGAGCGGTTCCTGAGCCTGCCGGTCCCCCGGACCTACG TGTACGGCGAGCGCACCCCAGGCCTGGAGCCGCTGCTGGAGTCGCTGCGCAGCCACGGGGTGCCGACCCGGATGGTGCCC GGCGCCGGCCACAGCATGATGGTCGAGCGCCCGGACGTGTTCGACCGGATCCTGCGGGAGCACCTCGCCCCGAAGGGCTG TTGA
Upstream 100 bases:
>100_bases CTCGTCTAACGAAGGGATCTCTGCGGCACCGCAATCGTGCCGCCCTACGACGCCGGAAGGGCCTCCGGCGCGGGGCCCTC CGATTCGGGAGTGAAGCGAG
Downstream 100 bases:
>100_bases TCCTGGCTGACGTCCTACCATCGGGATGCCGGTGCGGCGGGAGGGGAAAGCTGTCCGCGCGTGCACCGCATGTCCGCAGC ACCGGATGGCACGGGTCAGC
Product: hypothetical protein
Products: 2-oxopent-4-enoate; succinate [C]
Alternate protein names: Alpha/Beta Hydrolase Fold Protein; Alpha/Beta Hydrolase; Alpha/Beta Fold Family Hydrolase; Alpha/Beta Hydrolase Family Protein; Alpha/Beta Hydrolase Fold; Hydrolase Alpha/Beta Fold Family
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MDLRLIRWPSRAGTLAVRMRAGGGPEPVLLLHGLGASHVFFLPAAAGKALAGRAVILPDLPGHGDSEDPAGFACAMDDLA DLLMELLDWLGLSRVSLVGHSMGGTIAILMAERDPGRFTGLLCAEGNLRPEDATLSRRLAAMGAEGVRAALPRLVGKFAG SGLDGREDDLLYAATLSRCAPDVLWRYAAGLVRTSDTPGLLERFLSLPVPRTYVYGERTPGLEPLLESLRSHGVPTRMVP GAGHSMMVERPDVFDRILREHLAPKGC
Sequences:
>Translated_267_residues MDLRLIRWPSRAGTLAVRMRAGGGPEPVLLLHGLGASHVFFLPAAAGKALAGRAVILPDLPGHGDSEDPAGFACAMDDLA DLLMELLDWLGLSRVSLVGHSMGGTIAILMAERDPGRFTGLLCAEGNLRPEDATLSRRLAAMGAEGVRAALPRLVGKFAG SGLDGREDDLLYAATLSRCAPDVLWRYAAGLVRTSDTPGLLERFLSLPVPRTYVYGERTPGLEPLLESLRSHGVPTRMVP GAGHSMMVERPDVFDRILREHLAPKGC >Mature_267_residues MDLRLIRWPSRAGTLAVRMRAGGGPEPVLLLHGLGASHVFFLPAAAGKALAGRAVILPDLPGHGDSEDPAGFACAMDDLA DLLMELLDWLGLSRVSLVGHSMGGTIAILMAERDPGRFTGLLCAEGNLRPEDATLSRRLAAMGAEGVRAALPRLVGKFAG SGLDGREDDLLYAATLSRCAPDVLWRYAAGLVRTSDTPGLLERFLSLPVPRTYVYGERTPGLEPLLESLRSHGVPTRMVP GAGHSMMVERPDVFDRILREHLAPKGC
Specific function: 3-hydroxyphenylpropionate degradation. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.7.1.- [C]
Molecular weight: Translated: 28487; Mature: 28487
Theoretical pI: Translated: 6.88; Mature: 6.88
Prosite motif: PS00120 LIPASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLRLIRWPSRAGTLAVRMRAGGGPEPVLLLHGLGASHVFFLPAAAGKALAGRAVILPDL CCCEEEECCCCCCEEEEEEECCCCCCCEEEEECCCCCEEEEEECCCCHHHCCCEEEECCC PGHGDSEDPAGFACAMDDLADLLMELLDWLGLSRVSLVGHSMGGTIAILMAERDPGRFTG CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEEEEECCCCCCEEE LLCAEGNLRPEDATLSRRLAAMGAEGVRAALPRLVGKFAGSGLDGREDDLLYAATLSRCA EEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH PDVLWRYAAGLVRTSDTPGLLERFLSLPVPRTYVYGERTPGLEPLLESLRSHGVPTRMVP HHHHHHHHHHHEECCCCHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHCCCCCEECC GAGHSMMVERPDVFDRILREHLAPKGC CCCCCEEEECCHHHHHHHHHHCCCCCC >Mature Secondary Structure MDLRLIRWPSRAGTLAVRMRAGGGPEPVLLLHGLGASHVFFLPAAAGKALAGRAVILPDL CCCEEEECCCCCCEEEEEEECCCCCCCEEEEECCCCCEEEEEECCCCHHHCCCEEEECCC PGHGDSEDPAGFACAMDDLADLLMELLDWLGLSRVSLVGHSMGGTIAILMAERDPGRFTG CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEEEEECCCCCCEEE LLCAEGNLRPEDATLSRRLAAMGAEGVRAALPRLVGKFAGSGLDGREDDLLYAATLSRCA EEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH PDVLWRYAAGLVRTSDTPGLLERFLSLPVPRTYVYGERTPGLEPLLESLRSHGVPTRMVP HHHHHHHHHHHEECCCCHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHCCCCCEECC GAGHSMMVERPDVFDRILREHLAPKGC CCCCCEEEECCHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 2-hydroxy-6-ketononadienedicarboxylate; H2O [C]
Specific reaction: 2-hydroxy-6-ketononadienedicarboxylate + H2O = 2-oxopent-4-enoate + succinate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA