Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is mhpC [C]

Identifier: 51893506

GI number: 51893506

Start: 2557769

End: 2558572

Strand: Reverse

Name: mhpC [C]

Synonym: STH2368

Alternate gene names: 51893506

Gene position: 2558572-2557769 (Counterclockwise)

Preceding gene: 51893507

Following gene: 51893504

Centisome position: 71.75

GC content: 73.63

Gene sequence:

>804_bases
ATGGATCTCCGCCTCATCCGATGGCCGTCGCGCGCCGGCACCCTGGCCGTGCGCATGCGCGCAGGCGGAGGCCCGGAACC
CGTCCTGCTCCTCCACGGGCTCGGGGCCTCCCACGTCTTCTTCCTGCCGGCCGCGGCCGGCAAGGCCCTGGCGGGGCGGG
CGGTCATCCTTCCCGACCTGCCCGGACACGGCGACAGCGAGGATCCGGCAGGCTTCGCCTGTGCCATGGACGACCTGGCG
GATCTCCTGATGGAGCTGCTGGACTGGCTGGGCCTCAGCAGGGTCAGCCTGGTGGGCCACAGCATGGGCGGCACCATCGC
CATACTCATGGCTGAACGTGACCCCGGACGCTTCACGGGCCTGCTCTGCGCCGAGGGCAACCTGCGTCCGGAGGACGCCA
CCCTGAGCCGCAGGCTGGCGGCGATGGGCGCGGAGGGCGTCCGGGCCGCGCTGCCGCGGCTGGTCGGGAAGTTCGCCGGG
AGCGGCCTGGACGGCCGGGAGGACGATCTGCTCTACGCCGCCACCCTCAGCCGGTGCGCGCCCGACGTGCTGTGGCGGTA
CGCCGCCGGGCTGGTCCGGACCTCCGACACGCCGGGGCTGCTGGAGCGGTTCCTGAGCCTGCCGGTCCCCCGGACCTACG
TGTACGGCGAGCGCACCCCAGGCCTGGAGCCGCTGCTGGAGTCGCTGCGCAGCCACGGGGTGCCGACCCGGATGGTGCCC
GGCGCCGGCCACAGCATGATGGTCGAGCGCCCGGACGTGTTCGACCGGATCCTGCGGGAGCACCTCGCCCCGAAGGGCTG
TTGA

Upstream 100 bases:

>100_bases
CTCGTCTAACGAAGGGATCTCTGCGGCACCGCAATCGTGCCGCCCTACGACGCCGGAAGGGCCTCCGGCGCGGGGCCCTC
CGATTCGGGAGTGAAGCGAG

Downstream 100 bases:

>100_bases
TCCTGGCTGACGTCCTACCATCGGGATGCCGGTGCGGCGGGAGGGGAAAGCTGTCCGCGCGTGCACCGCATGTCCGCAGC
ACCGGATGGCACGGGTCAGC

Product: hypothetical protein

Products: 2-oxopent-4-enoate; succinate [C]

Alternate protein names: Alpha/Beta Hydrolase Fold Protein; Alpha/Beta Hydrolase; Alpha/Beta Fold Family Hydrolase; Alpha/Beta Hydrolase Family Protein; Alpha/Beta Hydrolase Fold; Hydrolase Alpha/Beta Fold Family

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
MDLRLIRWPSRAGTLAVRMRAGGGPEPVLLLHGLGASHVFFLPAAAGKALAGRAVILPDLPGHGDSEDPAGFACAMDDLA
DLLMELLDWLGLSRVSLVGHSMGGTIAILMAERDPGRFTGLLCAEGNLRPEDATLSRRLAAMGAEGVRAALPRLVGKFAG
SGLDGREDDLLYAATLSRCAPDVLWRYAAGLVRTSDTPGLLERFLSLPVPRTYVYGERTPGLEPLLESLRSHGVPTRMVP
GAGHSMMVERPDVFDRILREHLAPKGC

Sequences:

>Translated_267_residues
MDLRLIRWPSRAGTLAVRMRAGGGPEPVLLLHGLGASHVFFLPAAAGKALAGRAVILPDLPGHGDSEDPAGFACAMDDLA
DLLMELLDWLGLSRVSLVGHSMGGTIAILMAERDPGRFTGLLCAEGNLRPEDATLSRRLAAMGAEGVRAALPRLVGKFAG
SGLDGREDDLLYAATLSRCAPDVLWRYAAGLVRTSDTPGLLERFLSLPVPRTYVYGERTPGLEPLLESLRSHGVPTRMVP
GAGHSMMVERPDVFDRILREHLAPKGC
>Mature_267_residues
MDLRLIRWPSRAGTLAVRMRAGGGPEPVLLLHGLGASHVFFLPAAAGKALAGRAVILPDLPGHGDSEDPAGFACAMDDLA
DLLMELLDWLGLSRVSLVGHSMGGTIAILMAERDPGRFTGLLCAEGNLRPEDATLSRRLAAMGAEGVRAALPRLVGKFAG
SGLDGREDDLLYAATLSRCAPDVLWRYAAGLVRTSDTPGLLERFLSLPVPRTYVYGERTPGLEPLLESLRSHGVPTRMVP
GAGHSMMVERPDVFDRILREHLAPKGC

Specific function: 3-hydroxyphenylpropionate degradation. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.7.1.- [C]

Molecular weight: Translated: 28487; Mature: 28487

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: PS00120 LIPASE_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLRLIRWPSRAGTLAVRMRAGGGPEPVLLLHGLGASHVFFLPAAAGKALAGRAVILPDL
CCCEEEECCCCCCEEEEEEECCCCCCCEEEEECCCCCEEEEEECCCCHHHCCCEEEECCC
PGHGDSEDPAGFACAMDDLADLLMELLDWLGLSRVSLVGHSMGGTIAILMAERDPGRFTG
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEEEEECCCCCCEEE
LLCAEGNLRPEDATLSRRLAAMGAEGVRAALPRLVGKFAGSGLDGREDDLLYAATLSRCA
EEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
PDVLWRYAAGLVRTSDTPGLLERFLSLPVPRTYVYGERTPGLEPLLESLRSHGVPTRMVP
HHHHHHHHHHHEECCCCHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHCCCCCEECC
GAGHSMMVERPDVFDRILREHLAPKGC
CCCCCEEEECCHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MDLRLIRWPSRAGTLAVRMRAGGGPEPVLLLHGLGASHVFFLPAAAGKALAGRAVILPDL
CCCEEEECCCCCCEEEEEEECCCCCCCEEEEECCCCCEEEEEECCCCHHHCCCEEEECCC
PGHGDSEDPAGFACAMDDLADLLMELLDWLGLSRVSLVGHSMGGTIAILMAERDPGRFTG
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEEEEECCCCCCEEE
LLCAEGNLRPEDATLSRRLAAMGAEGVRAALPRLVGKFAGSGLDGREDDLLYAATLSRCA
EEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
PDVLWRYAAGLVRTSDTPGLLERFLSLPVPRTYVYGERTPGLEPLLESLRSHGVPTRMVP
HHHHHHHHHHHEECCCCHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHCCCCCEECC
GAGHSMMVERPDVFDRILREHLAPKGC
CCCCCEEEECCHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 2-hydroxy-6-ketononadienedicarboxylate; H2O [C]

Specific reaction: 2-hydroxy-6-ketononadienedicarboxylate + H2O = 2-oxopent-4-enoate + succinate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA