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The map label for this gene is alsB [H]

Identifier: 51893480

GI number: 51893480

Start: 2529786

End: 2530745

Strand: Reverse

Name: alsB [H]

Synonym: STH2342

Alternate gene names: 51893480

Gene position: 2530745-2529786 (Counterclockwise)

Preceding gene: 51893481

Following gene: 51893479

Centisome position: 70.97

GC content: 65.83

Gene sequence:

>960_bases
TTGCTGACCGCTGCGCTGGCTGTCACCGTATCCGGCTGTGGAAGCTCCCAGACGCAGACTCCCGGCTCGTCGACCCCCGG
CCAGCAGACCGAAACGAAGGCCGAGTACGCCGTCGTTCTCAAGGTGCTCTCCAGCCCGTTCTGGCAGAGCATGCGCGACG
GCATCCTCGAGGAAGCCGAGAAGCAGGGCATCAAGGTCGATATCTACGCCGCCAACTCGGAGGATGACGTGGAAGGGCAG
GTCACCCTGCTCGAGAACGCCATCAACAAGGGCTACAAGGCGATCGGCGTGGCGCCCATCTCTGCGGACAACCTGGTGCC
GGCCGTGGCCGAGGCTTCGAAGAAGGGCATCTACGTCATCAACATCGATGAGAAGCTCAATCTGGAGAGCCTGAAGGGGC
TCGGCGGCGCCGTCCAGGCCTTCGTGTCCACCGATAACAAGGCCGTCGGGCGGACGGGCGCGCAGTACATCATCGACCGG
ATCGGCGGTTCCGGCCAGGTGGCCATCATCGAGGGCAAGGCCGGCGCGGCCTCGGGCGAGGATCGCAAGGCCGGCGCCAC
CGAAGCCTTCCTGAAGGCGGGGGTCGAACTGGTCGAGAGCCAGCCGGCGGACTGGGACCGCACCAAGGCCTATGACCTGG
CCACCAACTACATCGCCAAGTATCCCGACCTGAAGGGCATTTACGCCTGCAACGACACCATGGCCATGGGCGCCCTGGAG
GCGGTGAAGAACGCCGGCAAGGACATCGTGGTGGTCGGCACCGACGGCAACGAGGACGCGGTGGCTTCGGTGAAGGCCGG
CGAGCTCGCTGCGACCGTGGCCCAGGATCCCGCGCAGATCGGCCGCCGAGGCGTGCAGCTCATGATCGAGGCCGTCAAGG
CGGGCAAGGCGATTGACCCCAACGCGGCGCCTGCGATGGAATCGGTCGACGCGATCCTGATCACCAAGGACGCCAACTAG

Upstream 100 bases:

>100_bases
CTGCCTGATTCAGAGCCCGTGCCTCGGCAAGGGTTTTGAATACACACAGATGGAGGAGGAAACCACCGTGACCAAAGTGT
CCAGGATCGCTGCCTCCGTG

Downstream 100 bases:

>100_bases
GGTGGCTGACCCGGGTCGGCACCCGGCGGCGCTGCCGCCGGGTGCCGATCACGATGCGGGAGGGAAGGGGTGCGCCATGG
AACCGCTCGTTCGGATGGAT

Product: D-allose transporter subunit

Products: ADP; phosphate; ribose [Cytoplasm]; D-allose [Cytoplasm] [C]

Alternate protein names: ALBP [H]

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MLTAALAVTVSGCGSSQTQTPGSSTPGQQTETKAEYAVVLKVLSSPFWQSMRDGILEEAEKQGIKVDIYAANSEDDVEGQ
VTLLENAINKGYKAIGVAPISADNLVPAVAEASKKGIYVINIDEKLNLESLKGLGGAVQAFVSTDNKAVGRTGAQYIIDR
IGGSGQVAIIEGKAGAASGEDRKAGATEAFLKAGVELVESQPADWDRTKAYDLATNYIAKYPDLKGIYACNDTMAMGALE
AVKNAGKDIVVVGTDGNEDAVASVKAGELAATVAQDPAQIGRRGVQLMIEAVKAGKAIDPNAAPAMESVDAILITKDAN

Sequences:

>Translated_319_residues
MLTAALAVTVSGCGSSQTQTPGSSTPGQQTETKAEYAVVLKVLSSPFWQSMRDGILEEAEKQGIKVDIYAANSEDDVEGQ
VTLLENAINKGYKAIGVAPISADNLVPAVAEASKKGIYVINIDEKLNLESLKGLGGAVQAFVSTDNKAVGRTGAQYIIDR
IGGSGQVAIIEGKAGAASGEDRKAGATEAFLKAGVELVESQPADWDRTKAYDLATNYIAKYPDLKGIYACNDTMAMGALE
AVKNAGKDIVVVGTDGNEDAVASVKAGELAATVAQDPAQIGRRGVQLMIEAVKAGKAIDPNAAPAMESVDAILITKDAN
>Mature_319_residues
MLTAALAVTVSGCGSSQTQTPGSSTPGQQTETKAEYAVVLKVLSSPFWQSMRDGILEEAEKQGIKVDIYAANSEDDVEGQ
VTLLENAINKGYKAIGVAPISADNLVPAVAEASKKGIYVINIDEKLNLESLKGLGGAVQAFVSTDNKAVGRTGAQYIIDR
IGGSGQVAIIEGKAGAASGEDRKAGATEAFLKAGVELVESQPADWDRTKAYDLATNYIAKYPDLKGIYACNDTMAMGALE
AVKNAGKDIVVVGTDGNEDAVASVKAGELAATVAQDPAQIGRRGVQLMIEAVKAGKAIDPNAAPAMESVDAILITKDAN

Specific function: Part of the binding-protein-dependent transport system AlsBAC for D-allose [H]

COG id: COG1879

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 2 family [H]

Homologues:

Organism=Escherichia coli, GI1790526, Length=287, Percent_Identity=56.4459930313589, Blast_Score=310, Evalue=9e-86,
Organism=Escherichia coli, GI1790192, Length=265, Percent_Identity=32.4528301886792, Blast_Score=140, Evalue=1e-34,
Organism=Escherichia coli, GI1790674, Length=233, Percent_Identity=30.4721030042918, Blast_Score=85, Evalue=7e-18,
Organism=Escherichia coli, GI1789990, Length=263, Percent_Identity=25.4752851711027, Blast_Score=62, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001761 [H]

Pfam domain/function: PF00532 Peripla_BP_1 [H]

EC number: NA

Molecular weight: Translated: 32977; Mature: 32977

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTAALAVTVSGCGSSQTQTPGSSTPGQQTETKAEYAVVLKVLSSPFWQSMRDGILEEAE
CCEEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
KQGIKVDIYAANSEDDVEGQVTLLENAINKGYKAIGVAPISADNLVPAVAEASKKGIYVI
HCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHCCCCEEEE
NIDEKLNLESLKGLGGAVQAFVSTDNKAVGRTGAQYIIDRIGGSGQVAIIEGKAGAASGE
ECCCCCCHHHHHCCCHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCEEEEECCCCCCCCC
DRKAGATEAFLKAGVELVESQPADWDRTKAYDLATNYIAKYPDLKGIYACNDTMAMGALE
CCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHH
AVKNAGKDIVVVGTDGNEDAVASVKAGELAATVAQDPAQIGRRGVQLMIEAVKAGKAIDP
HHHHCCCEEEEEECCCCCCCEEEECCCHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCC
NAAPAMESVDAILITKDAN
CCCCHHHCCCEEEEEECCC
>Mature Secondary Structure
MLTAALAVTVSGCGSSQTQTPGSSTPGQQTETKAEYAVVLKVLSSPFWQSMRDGILEEAE
CCEEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
KQGIKVDIYAANSEDDVEGQVTLLENAINKGYKAIGVAPISADNLVPAVAEASKKGIYVI
HCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHCCCCEEEE
NIDEKLNLESLKGLGGAVQAFVSTDNKAVGRTGAQYIIDRIGGSGQVAIIEGKAGAASGE
ECCCCCCHHHHHCCCHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCEEEEECCCCCCCCC
DRKAGATEAFLKAGVELVESQPADWDRTKAYDLATNYIAKYPDLKGIYACNDTMAMGALE
CCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHH
AVKNAGKDIVVVGTDGNEDAVASVKAGELAATVAQDPAQIGRRGVQLMIEAVKAGKAIDP
HHHHCCCEEEEEECCCCCCCEEEECCCHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCC
NAAPAMESVDAILITKDAN
CCCCHHHCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; ribose [Periplasm]; D-allose [Periplasm]; ATP [C]

Specific reaction: ATP + H2O + ribose [Periplasm] = ADP + phosphate + ribose [Cytoplasm] D-allose [Periplasm] + ATP + H2O = D-allose [Cytoplasm] + ADP + phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 8576032; 9401019; 10064713 [H]