Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51893387

Identifier: 51893387

GI number: 51893387

Start: 2414280

End: 2415482

Strand: Reverse

Name: 51893387

Synonym: STH2249

Alternate gene names: NA

Gene position: 2415482-2414280 (Counterclockwise)

Preceding gene: 51893388

Following gene: 51893386

Centisome position: 67.73

GC content: 62.09

Gene sequence:

>1203_bases
ATGGGGGAGTGGGAGCCGATGAAGGGGGATCACACACGCCGTGCCAGGTGGCTGGCCTGGCTGATGCTTGCGGCGCTGCT
CGTGCACGGGCCGGTGGGGGCAGGAGCGGAGGAGCCGCTGCAGCCGGAGGTGGCGGAGTACCCGGCTGAGAACTACGAAC
CCGGTCCGGGATGGCCGGAGGGCTGGACGCCGCCGCCCCCGCCCGAGGGCATGTCGGAGCAGATGCGGGCGGAGGTGGAA
CAGGCGCTCCGAGACAATCCGGATATGTATGATCGGTACGACTGGTGGGTGTGGGATCCGCTTCCTGCCTGGACCCAGGA
GTATCCCTGGTACTGGGAGGAGGACTGGATGGTCTGCGGGACGACGATCCACGTGTACGCCTATCCGAAGCCGGATACGC
GGTTGATCAGAGAGGTTTATGGGCGATCATATGGCTGGTCGCGCCTCTACTGGAAACCGTGCCGGTATGAGCCTATCAAC
TCGCTTACCGAGGCGCGCGGACTCACCGAGGAAGAGAAACTGGCCGAAGGGCGGGGCATCGAGTACGAGTATTGGATGGA
CAAGTCTCACCCTGGGCTGGGCCGAGACTATGGATACCGGCATAACGGAAGCCCGGAAGAGATCTTTGTCTTCTTCAACT
TCGGCAACGCCAGCAGCCACTTCGACACTCCAGCTTACCTTGACACCACCGTCAATCGGGTTCGGGTACCCATCCGGTTC
ATCAGCGAGATGATGGGGGCGGAGGTCACCTGGGACCAGGCCGGGCGGCGGGTGACCATTCATTTCCCGGCAGTTACCCG
TGAAGTAGTGAAAGCTGTGCCTGCGCCTGGATACGACTATCCCGACCTGATCCACCCGGAAACACACCTGCCCGACCCAT
ACTTGTACCTGTTGCAGGAACAGACGGTGAGTGTACCCGAGCGAACCATCGTGCTGACGATCGATCACCCAGTGGCGGTG
GTAGACGGGCACGAGGTGGCCCTAGACGCCCCGCCGGTGATCCGGAACGACCGAACGATGGTGCCTGTCCGCTTCATAGC
TGAGCAGATGGGTGCCAAAGTTTACTGGGTCGGGGCCGAACCCATCTACCGGCTCGACGATGGGACCATGTCAGGCAGGT
ACCAGGTTCACATCTTCACGCCGTTCTTCCCCCTGTACGAGTACCCCAGCTGGTACCTGGAGAATCGCGCGGTGAGGTAC
TAA

Upstream 100 bases:

>100_bases
CGGATGGAGGGCGCGGCGAGTCCGCCGTGACGCCCCTGGCGTTCCCCCGGGCAAACCTCTGCCCGGGGGTTTTCGTATTG
GTTATGGGAGAACGAACAAC

Downstream 100 bases:

>100_bases
GGGGGAGCTGGAATTATGAACTGGCGACGCTGGTTCGCGGGGGTCCTGGCCTGCTCGCTTGCCATGGTACCCAGTCCCGC
CGTTGTCGCGGGCGACTGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 400; Mature: 399

Protein sequence:

>400_residues
MGEWEPMKGDHTRRARWLAWLMLAALLVHGPVGAGAEEPLQPEVAEYPAENYEPGPGWPEGWTPPPPPEGMSEQMRAEVE
QALRDNPDMYDRYDWWVWDPLPAWTQEYPWYWEEDWMVCGTTIHVYAYPKPDTRLIREVYGRSYGWSRLYWKPCRYEPIN
SLTEARGLTEEEKLAEGRGIEYEYWMDKSHPGLGRDYGYRHNGSPEEIFVFFNFGNASSHFDTPAYLDTTVNRVRVPIRF
ISEMMGAEVTWDQAGRRVTIHFPAVTREVVKAVPAPGYDYPDLIHPETHLPDPYLYLLQEQTVSVPERTIVLTIDHPVAV
VDGHEVALDAPPVIRNDRTMVPVRFIAEQMGAKVYWVGAEPIYRLDDGTMSGRYQVHIFTPFFPLYEYPSWYLENRAVRY

Sequences:

>Translated_400_residues
MGEWEPMKGDHTRRARWLAWLMLAALLVHGPVGAGAEEPLQPEVAEYPAENYEPGPGWPEGWTPPPPPEGMSEQMRAEVE
QALRDNPDMYDRYDWWVWDPLPAWTQEYPWYWEEDWMVCGTTIHVYAYPKPDTRLIREVYGRSYGWSRLYWKPCRYEPIN
SLTEARGLTEEEKLAEGRGIEYEYWMDKSHPGLGRDYGYRHNGSPEEIFVFFNFGNASSHFDTPAYLDTTVNRVRVPIRF
ISEMMGAEVTWDQAGRRVTIHFPAVTREVVKAVPAPGYDYPDLIHPETHLPDPYLYLLQEQTVSVPERTIVLTIDHPVAV
VDGHEVALDAPPVIRNDRTMVPVRFIAEQMGAKVYWVGAEPIYRLDDGTMSGRYQVHIFTPFFPLYEYPSWYLENRAVRY
>Mature_399_residues
GEWEPMKGDHTRRARWLAWLMLAALLVHGPVGAGAEEPLQPEVAEYPAENYEPGPGWPEGWTPPPPPEGMSEQMRAEVEQ
ALRDNPDMYDRYDWWVWDPLPAWTQEYPWYWEEDWMVCGTTIHVYAYPKPDTRLIREVYGRSYGWSRLYWKPCRYEPINS
LTEARGLTEEEKLAEGRGIEYEYWMDKSHPGLGRDYGYRHNGSPEEIFVFFNFGNASSHFDTPAYLDTTVNRVRVPIRFI
SEMMGAEVTWDQAGRRVTIHFPAVTREVVKAVPAPGYDYPDLIHPETHLPDPYLYLLQEQTVSVPERTIVLTIDHPVAVV
DGHEVALDAPPVIRNDRTMVPVRFIAEQMGAKVYWVGAEPIYRLDDGTMSGRYQVHIFTPFFPLYEYPSWYLENRAVRY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46597; Mature: 46466

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGEWEPMKGDHTRRARWLAWLMLAALLVHGPVGAGAEEPLQPEVAEYPAENYEPGPGWPE
CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCC
GWTPPPPPEGMSEQMRAEVEQALRDNPDMYDRYDWWVWDPLPAWTQEYPWYWEEDWMVCG
CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHCCCCCEECCCEEEEC
TTIHVYAYPKPDTRLIREVYGRSYGWSRLYWKPCRYEPINSLTEARGLTEEEKLAEGRGI
CEEEEEEECCCHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHCCCCHHHHHHCCCCC
EYEYWMDKSHPGLGRDYGYRHNGSPEEIFVFFNFGNASSHFDTPAYLDTTVNRVRVPIRF
EEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHEEHHHHH
ISEMMGAEVTWDQAGRRVTIHFPAVTREVVKAVPAPGYDYPDLIHPETHLPDPYLYLLQE
HHHHHCCEEEHHHCCCEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEH
QTVSVPERTIVLTIDHPVAVVDGHEVALDAPPVIRNDRTMVPVRFIAEQMGAKVYWVGAE
HHCCCCCEEEEEEECCCEEEECCCEEEECCCCCCCCCCCEEHHHHHHHHHCCEEEEECCC
PIYRLDDGTMSGRYQVHIFTPFFPLYEYPSWYLENRAVRY
CEEEECCCCCCCEEEEEEECCCHHHHCCCCHHHCCCCCCC
>Mature Secondary Structure 
GEWEPMKGDHTRRARWLAWLMLAALLVHGPVGAGAEEPLQPEVAEYPAENYEPGPGWPE
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCC
GWTPPPPPEGMSEQMRAEVEQALRDNPDMYDRYDWWVWDPLPAWTQEYPWYWEEDWMVCG
CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHCCCCCEECCCEEEEC
TTIHVYAYPKPDTRLIREVYGRSYGWSRLYWKPCRYEPINSLTEARGLTEEEKLAEGRGI
CEEEEEEECCCHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHCCCCHHHHHHCCCCC
EYEYWMDKSHPGLGRDYGYRHNGSPEEIFVFFNFGNASSHFDTPAYLDTTVNRVRVPIRF
EEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHEEHHHHH
ISEMMGAEVTWDQAGRRVTIHFPAVTREVVKAVPAPGYDYPDLIHPETHLPDPYLYLLQE
HHHHHCCEEEHHHCCCEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEH
QTVSVPERTIVLTIDHPVAVVDGHEVALDAPPVIRNDRTMVPVRFIAEQMGAKVYWVGAE
HHCCCCCEEEEEEECCCEEEECCCEEEECCCCCCCCCCCEEHHHHHHHHHCCEEEEECCC
PIYRLDDGTMSGRYQVHIFTPFFPLYEYPSWYLENRAVRY
CEEEECCCCCCCEEEEEEECCCHHHHCCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA