Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51893381

Identifier: 51893381

GI number: 51893381

Start: 2406611

End: 2407795

Strand: Reverse

Name: 51893381

Synonym: STH2243

Alternate gene names: NA

Gene position: 2407795-2406611 (Counterclockwise)

Preceding gene: 51893382

Following gene: 51893378

Centisome position: 67.52

GC content: 57.89

Gene sequence:

>1185_bases
ATGTGGGGGGAACAGACGAGGCGCGTCGGTTGGCTCACCTTGCTGGTTCTTACAGTCTTACTGTTTCAGCCCGTTGTTGG
GGTAGCGGCCACGGACGAGCCGAAGCCTGTGGTAGTGGACTATCCTCCTGAGAACTACGAGCCTGGCCCTGGGTGGCCGG
AGGGGTGGTCACCGCCACCGCCGCCTGAGGGCATGTCGGAACAGATGCGGTTGAGGGTTGAACAGGCGCTCCGCGAGCGC
CCGGATCTGTACGAGCGATACACCTGGTGGGTGTGGGAACCCTTACCTGAATGGACAAAGGAGTATCCTTGGTTCTGGCG
AGAGGATTGGATGGGTTGTGGTACTACGCTTCACGTCTACGCGTACCCGGTGCCGGACACCCAACTGATCACCAGGGTCT
TTGGACGGTCGTATGGCTGGACGCGCCTGTACCTCGAACCCTGCCGATACGAGCCGGTCCAGTTTATTGTCGAAGCTCTC
GAAATGAGTGAAGAGGAGAAGTTGGCTGAGGGGCGTCGTGCCGAGTATCTGTACTGGGTAGACAAGTCGCATCCGGGACT
GGGAAGGGATGATGGGAGGGATCGGAACGGAAGTCCTGACCACATCTATGTGTATCTCAACCAAGGGGACGCATCCAAGC
GATTTGACACTCCTGCGTACTTGGATACCACTGTTAACCGGGTGAGGGTGCCCATCCGTTTTGTCAGCGAGATGATGGGC
GCCGAGGTCACGTGGGATGAGACCGGCCGGAGGGTGACCATCCATTTTCCTGCAACGACGCGTGAAGTGATGAAAGTAGT
TCCGGCTGAGGGATATGACTATCCGGATCTTTTTGATGCTGAGGAGTACTTGCCGAACGGTTACCGCTTCTACTTCGAGC
AACGTGTGGTGAGGATACCGGAGCGTACCATTACCTTGACCATCGACCATCCCGTTGCGATTGTGGATGGCCGTGAAGTC
CGGCTGGATGCTCCCCCTGTGATCCGGAACGACCGGACGATGGTACCCGTTCGGTTTGTAGCCGAGCAGATGGGCGCCAA
AGTGTACTGGGTGGGGAAGGAGCCCATATTCCGGCTTGATGACGGCACCATGTCGGGTACCTATCAGGTCCACATCTTCA
CGCCGACGTTCCCACTGTACGAATACCCGAGTTGGTACCTGGAGAACCGTGCGGTGCGGTACTAG

Upstream 100 bases:

>100_bases
GTCATATTTCATGAACGGCGCTTGAACCGCTGAGCAAACCTTCGCTCAGGGGTTTTCGTATTGGCTAGGTGAGCACCTTT
TCGTAGGGAGTGGAGGCCAG

Downstream 100 bases:

>100_bases
CTCAAGTTTCACGCGAACAACTCGACATTCGTGGTGTTGAAAAAGTGCATTGGTAAGAAACGGCCCGGTTCAGGGTAATC
TCCGCTCCAGCCAGGGGAGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 394; Mature: 394

Protein sequence:

>394_residues
MWGEQTRRVGWLTLLVLTVLLFQPVVGVAATDEPKPVVVDYPPENYEPGPGWPEGWSPPPPPEGMSEQMRLRVEQALRER
PDLYERYTWWVWEPLPEWTKEYPWFWREDWMGCGTTLHVYAYPVPDTQLITRVFGRSYGWTRLYLEPCRYEPVQFIVEAL
EMSEEEKLAEGRRAEYLYWVDKSHPGLGRDDGRDRNGSPDHIYVYLNQGDASKRFDTPAYLDTTVNRVRVPIRFVSEMMG
AEVTWDETGRRVTIHFPATTREVMKVVPAEGYDYPDLFDAEEYLPNGYRFYFEQRVVRIPERTITLTIDHPVAIVDGREV
RLDAPPVIRNDRTMVPVRFVAEQMGAKVYWVGKEPIFRLDDGTMSGTYQVHIFTPTFPLYEYPSWYLENRAVRY

Sequences:

>Translated_394_residues
MWGEQTRRVGWLTLLVLTVLLFQPVVGVAATDEPKPVVVDYPPENYEPGPGWPEGWSPPPPPEGMSEQMRLRVEQALRER
PDLYERYTWWVWEPLPEWTKEYPWFWREDWMGCGTTLHVYAYPVPDTQLITRVFGRSYGWTRLYLEPCRYEPVQFIVEAL
EMSEEEKLAEGRRAEYLYWVDKSHPGLGRDDGRDRNGSPDHIYVYLNQGDASKRFDTPAYLDTTVNRVRVPIRFVSEMMG
AEVTWDETGRRVTIHFPATTREVMKVVPAEGYDYPDLFDAEEYLPNGYRFYFEQRVVRIPERTITLTIDHPVAIVDGREV
RLDAPPVIRNDRTMVPVRFVAEQMGAKVYWVGKEPIFRLDDGTMSGTYQVHIFTPTFPLYEYPSWYLENRAVRY
>Mature_394_residues
MWGEQTRRVGWLTLLVLTVLLFQPVVGVAATDEPKPVVVDYPPENYEPGPGWPEGWSPPPPPEGMSEQMRLRVEQALRER
PDLYERYTWWVWEPLPEWTKEYPWFWREDWMGCGTTLHVYAYPVPDTQLITRVFGRSYGWTRLYLEPCRYEPVQFIVEAL
EMSEEEKLAEGRRAEYLYWVDKSHPGLGRDDGRDRNGSPDHIYVYLNQGDASKRFDTPAYLDTTVNRVRVPIRFVSEMMG
AEVTWDETGRRVTIHFPATTREVMKVVPAEGYDYPDLFDAEEYLPNGYRFYFEQRVVRIPERTITLTIDHPVAIVDGREV
RLDAPPVIRNDRTMVPVRFVAEQMGAKVYWVGKEPIFRLDDGTMSGTYQVHIFTPTFPLYEYPSWYLENRAVRY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46358; Mature: 46358

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWGEQTRRVGWLTLLVLTVLLFQPVVGVAATDEPKPVVVDYPPENYEPGPGWPEGWSPPP
CCCCHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCC
PPEGMSEQMRLRVEQALRERPDLYERYTWWVWEPLPEWTKEYPWFWREDWMGCGTTLHVY
CCCCHHHHHHHHHHHHHHCCCCHHHHEEEEEECCCHHHHHHCCCEECHHHCCCCCEEEEE
AYPVPDTQLITRVFGRSYGWTRLYLEPCRYEPVQFIVEALEMSEEEKLAEGRRAEYLYWV
EECCCCHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHCCHHHHHHCCCCCEEEEEE
DKSHPGLGRDDGRDRNGSPDHIYVYLNQGDASKRFDTPAYLDTTVNRVRVPIRFVSEMMG
ECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHCCHHHEEHHHHHHHHHHC
AEVTWDETGRRVTIHFPATTREVMKVVPAEGYDYPDLFDAEEYLPNGYRFYFEQRVVRIP
CEEEECCCCCEEEEEECCCHHHHHHHCCCCCCCCCCCCCHHHHCCCCEEEEEEHHHEECC
ERTITLTIDHPVAIVDGREVRLDAPPVIRNDRTMVPVRFVAEQMGAKVYWVGKEPIFRLD
CEEEEEEECCCEEEECCCEEEECCCCCCCCCCEEEHHHHHHHHHCCEEEEECCCCEEEEC
DGTMSGTYQVHIFTPTFPLYEYPSWYLENRAVRY
CCCCCCEEEEEEECCCCCCCCCCCHHHCCCCCCC
>Mature Secondary Structure
MWGEQTRRVGWLTLLVLTVLLFQPVVGVAATDEPKPVVVDYPPENYEPGPGWPEGWSPPP
CCCCHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCC
PPEGMSEQMRLRVEQALRERPDLYERYTWWVWEPLPEWTKEYPWFWREDWMGCGTTLHVY
CCCCHHHHHHHHHHHHHHCCCCHHHHEEEEEECCCHHHHHHCCCEECHHHCCCCCEEEEE
AYPVPDTQLITRVFGRSYGWTRLYLEPCRYEPVQFIVEALEMSEEEKLAEGRRAEYLYWV
EECCCCHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHCCHHHHHHCCCCCEEEEEE
DKSHPGLGRDDGRDRNGSPDHIYVYLNQGDASKRFDTPAYLDTTVNRVRVPIRFVSEMMG
ECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHCCHHHEEHHHHHHHHHHC
AEVTWDETGRRVTIHFPATTREVMKVVPAEGYDYPDLFDAEEYLPNGYRFYFEQRVVRIP
CEEEECCCCCEEEEEECCCHHHHHHHCCCCCCCCCCCCCHHHHCCCCEEEEEEHHHEECC
ERTITLTIDHPVAIVDGREVRLDAPPVIRNDRTMVPVRFVAEQMGAKVYWVGKEPIFRLD
CEEEEEEECCCEEEECCCEEEECCCCCCCCCCEEEHHHHHHHHHCCEEEEECCCCEEEEC
DGTMSGTYQVHIFTPTFPLYEYPSWYLENRAVRY
CCCCCCEEEEEEECCCCCCCCCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA