| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51893355
Identifier: 51893355
GI number: 51893355
Start: 2380387
End: 2381931
Strand: Reverse
Name: 51893355
Synonym: STH2217
Alternate gene names: NA
Gene position: 2381931-2380387 (Counterclockwise)
Preceding gene: 51893356
Following gene: 51893353
Centisome position: 66.79
GC content: 69.77
Gene sequence:
>1545_bases TTGTGGGGTGCCCATCTGGAGCGGGGTAGCGAACCCGAAGGCTGGTCCAGCTACTCCATCTCCCTGCCCACCCTCATCGG CGCCAGGAACGCCTTCACCAACACCGAGCCCGCCATCGAGATCCGCCAGACCCCCAACGGCCCCGAAACGCACCTCTACG TCACCCTCCGCAACTACACCGACACCGGTGTGGGGCTGCGCGACGGACCCACCGGCGCCGACGGCGCCGTCGTGGCGCTC GGTCCCGGCGGCGAACTGAAGTGGTACCGCAAGTTCGGCCCCGCGGACCGGCTGAACGGTCGCAAGGCCTCCCTCAACAC CGCACCGCTGGTCCTGGTCAGCCGAGCGGCGCTCATTTTCGGCGACGTGAACGGCTACATCTACAGCTACGCGCTGGACA CCGGCAACCCGGCCGGCGGCGACGGCCGGCCGACGGTCATCCCTCCGGAAGGGAAAGCGCCCACGGACCGGCTGTTCCTG CTCAAGAACAACGAGCAGCCCAACACGGGCCCCTACAATTTCTCCCAGGTTTCCGGCGTGGGCGTGGACCCCGCCTTCGC CAACGGCCTCATGCTCGTGGGCGTCAACTACGAAGACGCCGGCGGAACCTCCGGCCGGCTGGTGGCCTACCGGGCTGGGG AGACCTACGACCTGCTGTGGCTGGATGCGCCGGAGCCCATGAAGCTTCAGCCGGGCAAGCCGGCCGCCATGCAGCCCCGG CTTCAGCTGGAGATGACCGAGCGGACGCTCTCAGCGCTCTGCCCGGGCCCGCTGTCCGTCCAGTGGTACCTCACGGACCA GAGCGGCCAGCCCATCCGCCCCCTCGGGGCGACGCCTCTGCCCGGAGACCTGGCCCCGCAGCAGCCCTACCCCGTGCCGG TGACGGTCACCCTGACCGGGAGCGATCCCGCCGAGGGCCAGATCGTGGGCGTCATCGACCTGCCCTCCGTCTACGCGCTC AGCGCGCCGCACACGGCCAACCCCAGGCTGGTTGTCGCGCGGGCCATAGCGGAGAAGATGGGGCTGACGGCTGAAAAGAG CTGCGCAGGGGCGGTGGCGGAGGTGGTCGAGCGGGAGGGCGAGCCCGGGCCGGAGGGCGGCCTGGCCAATAACGTGCTGA TGGTGCCCTACACCAGTCAGCAGCCGGCGCAAGCAATCGTGGATGACCCATCGGTGGTGGAACTGGCGGTTCCCGAGATC GTAGAGGCAGGCCGGCCGTTCGAAGTGGGCATCTACCTGGGCTACCAGAACAACCTGGGCCGCACCGAGATCCGGGTCCC GCTCCGGCTCTGGGCGCGGCCTGCTGCGGGCGGGTCACCGCCGGCAGGCGGCTGGCAGGCGGTGACCATCGGCCGGTTGC CGTGCTGCACCCTGAAGCCCGGCACGATCCCTGGCCTGAGTGCGGGCACGTGGGACATCATCGCCGAGATCGACTACCCG GATGACACCCGCCCGGAAAACAACCGCCTCATTCGACGGGTGGAGGTGCACAGTTCGCAGGGGGGCCAGAGAGGCGGCGC GGAAGGCGGCGCCATCACGGACTGA
Upstream 100 bases:
>100_bases TCGCCCGTACCGTGTCTGGACGGTAGACGGATCTTCTGGCTTTGCCGGTAACTTTACTTCCGACGGTACCAACGCGTACT GGTTAGATACAGGCGGCCGA
Downstream 100 bases:
>100_bases GGCCGTGTGACCCTCCCCGCAGAGTTTGTCGGCAGGGTCTAGCTCAAGTTTCACGCGAACAACTCGACATTCGTGGTGTT AAAAGGGCGTATGGGTAGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 514; Mature: 514
Protein sequence:
>514_residues MWGAHLERGSEPEGWSSYSISLPTLIGARNAFTNTEPAIEIRQTPNGPETHLYVTLRNYTDTGVGLRDGPTGADGAVVAL GPGGELKWYRKFGPADRLNGRKASLNTAPLVLVSRAALIFGDVNGYIYSYALDTGNPAGGDGRPTVIPPEGKAPTDRLFL LKNNEQPNTGPYNFSQVSGVGVDPAFANGLMLVGVNYEDAGGTSGRLVAYRAGETYDLLWLDAPEPMKLQPGKPAAMQPR LQLEMTERTLSALCPGPLSVQWYLTDQSGQPIRPLGATPLPGDLAPQQPYPVPVTVTLTGSDPAEGQIVGVIDLPSVYAL SAPHTANPRLVVARAIAEKMGLTAEKSCAGAVAEVVEREGEPGPEGGLANNVLMVPYTSQQPAQAIVDDPSVVELAVPEI VEAGRPFEVGIYLGYQNNLGRTEIRVPLRLWARPAAGGSPPAGGWQAVTIGRLPCCTLKPGTIPGLSAGTWDIIAEIDYP DDTRPENNRLIRRVEVHSSQGGQRGGAEGGAITD
Sequences:
>Translated_514_residues MWGAHLERGSEPEGWSSYSISLPTLIGARNAFTNTEPAIEIRQTPNGPETHLYVTLRNYTDTGVGLRDGPTGADGAVVAL GPGGELKWYRKFGPADRLNGRKASLNTAPLVLVSRAALIFGDVNGYIYSYALDTGNPAGGDGRPTVIPPEGKAPTDRLFL LKNNEQPNTGPYNFSQVSGVGVDPAFANGLMLVGVNYEDAGGTSGRLVAYRAGETYDLLWLDAPEPMKLQPGKPAAMQPR LQLEMTERTLSALCPGPLSVQWYLTDQSGQPIRPLGATPLPGDLAPQQPYPVPVTVTLTGSDPAEGQIVGVIDLPSVYAL SAPHTANPRLVVARAIAEKMGLTAEKSCAGAVAEVVEREGEPGPEGGLANNVLMVPYTSQQPAQAIVDDPSVVELAVPEI VEAGRPFEVGIYLGYQNNLGRTEIRVPLRLWARPAAGGSPPAGGWQAVTIGRLPCCTLKPGTIPGLSAGTWDIIAEIDYP DDTRPENNRLIRRVEVHSSQGGQRGGAEGGAITD >Mature_514_residues MWGAHLERGSEPEGWSSYSISLPTLIGARNAFTNTEPAIEIRQTPNGPETHLYVTLRNYTDTGVGLRDGPTGADGAVVAL GPGGELKWYRKFGPADRLNGRKASLNTAPLVLVSRAALIFGDVNGYIYSYALDTGNPAGGDGRPTVIPPEGKAPTDRLFL LKNNEQPNTGPYNFSQVSGVGVDPAFANGLMLVGVNYEDAGGTSGRLVAYRAGETYDLLWLDAPEPMKLQPGKPAAMQPR LQLEMTERTLSALCPGPLSVQWYLTDQSGQPIRPLGATPLPGDLAPQQPYPVPVTVTLTGSDPAEGQIVGVIDLPSVYAL SAPHTANPRLVVARAIAEKMGLTAEKSCAGAVAEVVEREGEPGPEGGLANNVLMVPYTSQQPAQAIVDDPSVVELAVPEI VEAGRPFEVGIYLGYQNNLGRTEIRVPLRLWARPAAGGSPPAGGWQAVTIGRLPCCTLKPGTIPGLSAGTWDIIAEIDYP DDTRPENNRLIRRVEVHSSQGGQRGGAEGGAITD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54300; Mature: 54300
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWGAHLERGSEPEGWSSYSISLPTLIGARNAFTNTEPAIEIRQTPNGPETHLYVTLRNYT CCCCCCCCCCCCCCCCEEEEECCCEEECCCCCCCCCCCEEEEECCCCCCEEEEEEEECCC DTGVGLRDGPTGADGAVVALGPGGELKWYRKFGPADRLNGRKASLNTAPLVLVSRAALIF CCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCHHHCCCCEECCCCCCEEEEECEEEEE GDVNGYIYSYALDTGNPAGGDGRPTVIPPEGKAPTDRLFLLKNNEQPNTGPYNFSQVSGV ECCCCEEEEEEECCCCCCCCCCCCCEECCCCCCCCCEEEEEECCCCCCCCCCCHHHCCCC GVDPAFANGLMLVGVNYEDAGGTSGRLVAYRAGETYDLLWLDAPEPMKLQPGKPAAMQPR CCCHHHHCCEEEEEEEECCCCCCCCEEEEEECCCEEEEEEECCCCCCEECCCCCCCCCCC LQLEMTERTLSALCPGPLSVQWYLTDQSGQPIRPLGATPLPGDLAPQQPYPVPVTVTLTG EEEEEHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECC SDPAEGQIVGVIDLPSVYALSAPHTANPRLVVARAIAEKMGLTAEKSCAGAVAEVVEREG CCCCCCEEEEEEECCCEEEECCCCCCCCCEEEHHHHHHHHCCCCCHHHHHHHHHHHHHCC EPGPEGGLANNVLMVPYTSQQPAQAIVDDPSVVELAVPEIVEAGRPFEVGIYLGYQNNLG CCCCCCCCCCCEEEEEECCCCCHHHHCCCCCEEEEECHHHHHCCCCEEEEEEEEECCCCC RTEIRVPLRLWARPAAGGSPPAGGWQAVTIGRLPCCTLKPGTIPGLSAGTWDIIAEIDYP CEEEEEEEEEEECCCCCCCCCCCCEEEEEECCCCEEEECCCCCCCCCCCCEEEEEEECCC DDTRPENNRLIRRVEVHSSQGGQRGGAEGGAITD CCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCC >Mature Secondary Structure MWGAHLERGSEPEGWSSYSISLPTLIGARNAFTNTEPAIEIRQTPNGPETHLYVTLRNYT CCCCCCCCCCCCCCCCEEEEECCCEEECCCCCCCCCCCEEEEECCCCCCEEEEEEEECCC DTGVGLRDGPTGADGAVVALGPGGELKWYRKFGPADRLNGRKASLNTAPLVLVSRAALIF CCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCHHHCCCCEECCCCCCEEEEECEEEEE GDVNGYIYSYALDTGNPAGGDGRPTVIPPEGKAPTDRLFLLKNNEQPNTGPYNFSQVSGV ECCCCEEEEEEECCCCCCCCCCCCCEECCCCCCCCCEEEEEECCCCCCCCCCCHHHCCCC GVDPAFANGLMLVGVNYEDAGGTSGRLVAYRAGETYDLLWLDAPEPMKLQPGKPAAMQPR CCCHHHHCCEEEEEEEECCCCCCCCEEEEEECCCEEEEEEECCCCCCEECCCCCCCCCCC LQLEMTERTLSALCPGPLSVQWYLTDQSGQPIRPLGATPLPGDLAPQQPYPVPVTVTLTG EEEEEHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECC SDPAEGQIVGVIDLPSVYALSAPHTANPRLVVARAIAEKMGLTAEKSCAGAVAEVVEREG CCCCCCEEEEEEECCCEEEECCCCCCCCCEEEHHHHHHHHCCCCCHHHHHHHHHHHHHCC EPGPEGGLANNVLMVPYTSQQPAQAIVDDPSVVELAVPEIVEAGRPFEVGIYLGYQNNLG CCCCCCCCCCCEEEEEECCCCCHHHHCCCCCEEEEECHHHHHCCCCEEEEEEEEECCCCC RTEIRVPLRLWARPAAGGSPPAGGWQAVTIGRLPCCTLKPGTIPGLSAGTWDIIAEIDYP CEEEEEEEEEEECCCCCCCCCCCCEEEEEECCCCEEEECCCCCCCCCCCCEEEEEEECCC DDTRPENNRLIRRVEVHSSQGGQRGGAEGGAITD CCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA