| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51893351
Identifier: 51893351
GI number: 51893351
Start: 2374449
End: 2376887
Strand: Reverse
Name: 51893351
Synonym: STH2213
Alternate gene names: NA
Gene position: 2376887-2374449 (Counterclockwise)
Preceding gene: 51893352
Following gene: 51893349
Centisome position: 66.65
GC content: 68.76
Gene sequence:
>2439_bases GTGCTGATAAGCACGGGCCAGGCTGGGGCGGAGGACTGGATCACCAAGGGCGGTACGCCGCAGCGTATGTCGGTGGTGGC GGAACCGCTTGGCCTGACAGAGATCACGGTCTACTGGGAGACGAAGCCGCTGGGCGAGAGCGCCACACAGCCAGCGGTGG TGAACGGCGTCATCTACCACTTGGCGGGTCCCTACCTCTGGCGTCTGGAGTTGGATCAACTGGGCCGGCCGAAGGGGGAC GCCACCGCGGTCACCGACCCGGTAAAGGCGTACAAGATTGAGTTCAACCGGCCGCCCGGCGGTCCTGTAATCGCCCCGCA GTCCAGTCCGACCTACAGCCCGGACTCGGGGGTGCTGTACTTCGGCACCGGATATGGTTGGCTCTGGGCCTATAACACCA GGGAGGGGTGGTACCGCCCCGCTGAACTGGACCTGGGTTGCCCCATCGTTGGATCGCCTCTCGTCATCCACGATCGGGGG CGGGATATCGTGGTGGTTGCCGACAGGCCCAATTACCCAGGAGAGGAGGATCGACCGGTAGGGAGGCCGCTTTGTCCCCG TAGCCACGGCAAGGTCTGGGTGGTTCAGGGACTGGACCGACCAGACGACGTAGTTCGATGGCAGAACTATCAGGCTCCAA CCACGAAACAGGCCGAAGATGGCTTTGGGGGGTATATCACACCATCGGCCGTATCCGCCCCAGTCCACGGGCTAAATCCA AGTTTCGTTGTTGGTGCGGATGGCTTTGAAGGTGGAAGGGCAATCCGGCTCGCCTTGGACCGAAACAACGACTACCGGCC CTACATGGTCTGGGCCGTCGACGGCCCCGCAGGCTTCGCGGGCAACTTCACCACAGACGGCACCAACGCCTATTGGATGG ACACCCGCGGCCACTTGTGGGGAGCTACCCTCCACAAGGGTCATGAACCCACAGGCTGGGGCACCTACTCCATCCCCCTA CCCGCCCTCATCGGCGCCAAGGCCGCGTTCACCAACACCGAACCCGCGGTGGAGGTCCGCCAGACCCCGGACGGCCCCGA AACCCACCTCTACGTCACCCTGCGCAACTACAGCGACACCGGGGCCGGCCTCCGGGACGGCCCCACCGGCAGCGACGGCG CCGTGGTGGCCATTGGCTCCAGCGGCGAGCTCAAGTGGTATCGCAAGTTCGGCCCTGCTGACCGGCTCGACGGGCGGATG GCCTCCCTCAACACCGCCCCCCTCGCCCTGGTCAGCCGCGGGGCGCTCCTCTTCGGCGACGTCAACGGCTTCTTCTACAG CTACTCCCTGGACAACGGCAACCCCAGCGGCGGCTCCGCCCGGGCGGCGCTGATCCACCCGGAGAGCCGTACCCCCGTCG ACCGGCTGTTCCTGCTGAAGGCTGGGGAGCGGCCAAACGTCGGTCCGTACAACTTCTCCCAGGTCTCCGGCGTCGGCGTC GACCCCGCCTTCGCCCACGGCCTCCTGCTGGTCGGCGTCAACTTCGAGACCGACGGCGGAACCTCCGGCCGCCTGGTGGC CTTCCGGACGGGGGAGAGCTACGACCTGCGGTGGCTGGATGCGCCCGCTCCGCTGGAACTGACCCCGGGCACGCCGGTTG CGCTGGAGCCGCGGCTGCAGCTGGAGATGACCACGCGCACCCTTGCAGCCCTTTGCCCGGGTCCCTGGACCGTGCGCTGG TTCGTGACGGACGCGGACGGCCAGTTGGTCCGCCCGCTGGGGGAGGTGCCGCTGCCGGGAGAGCTGGGGCCGCAGCAACC CTACCCGGTGCCGCTCACGGTGACCCTGGCCGAGGGGGATCCGGCCGAGGGCTGGATTGTCGGGGTCATCGATCTGCCCA CCGTGTACGCCCTGAGCACGGCCCACACGTCCAACCCCAAGGTCGCGCTGGCTAGGGGGATGGCCGCGGCGCAGGGGCTG CCGGCGGAGAAGACCTGCGCCGGCGCGGTGGCCGAGCTGATTGAGCGGAAGGGGGAGCCCGGCCCCGAGGGCGGGCTGGC CAACAACGTGCTCATCGTGCCCTACGCGATCCGGCAGCCTGCGCAGGTCGTCGTCGACGACCCGTCGGTGGTGGACCTGG CCGTGCCGTCGATGGCCGACGCGGGCCGGCCGTTCGAGGTGGGGATCTACCTCGGGTACCAGAACAACCTCGGTCGCAGC GCGATCCGGGTCCCGCTCCGGCTCTGGGCGCGGCCGGAGTCCGGCGGGTCGGCGCCGGCCGGGGGATGGCAGACGGTGAC CATCGACCGGATGCCCTGCTGCACCCTCAAGACGGGCACGATCCCGGGGCTGAGCGCGGGCACCTGGGAGATCGTCGCCG AGATCGACTACCCGGAGGACACCCGGCCGGAGAACAACCGGGTGATCCGCCGGGTGGAGGTGCTCTCGTCCAAGCCTGTG GAGGCGGGCGGCCCGGAGGGAGGGGCGATCACGGACTGA
Upstream 100 bases:
>100_bases TACCCGAGCTGGTACTTAGAAAACCGGGCTGTTCGGTACTGAGGGGGATCGACAGATGCACTGGAGACGCTGGCTCGCAG GGCCACTTGCGCTTCTCTTG
Downstream 100 bases:
>100_bases TCCCGCACGCCCCAACCCCCGGCGCGGGCGGCCCGCACGCCCGGGCCGCGCCCAGCACGGGGCGGCATGAGCGACTGCAC CCATGCGCAACACGGGAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 812; Mature: 812
Protein sequence:
>812_residues MLISTGQAGAEDWITKGGTPQRMSVVAEPLGLTEITVYWETKPLGESATQPAVVNGVIYHLAGPYLWRLELDQLGRPKGD ATAVTDPVKAYKIEFNRPPGGPVIAPQSSPTYSPDSGVLYFGTGYGWLWAYNTREGWYRPAELDLGCPIVGSPLVIHDRG RDIVVVADRPNYPGEEDRPVGRPLCPRSHGKVWVVQGLDRPDDVVRWQNYQAPTTKQAEDGFGGYITPSAVSAPVHGLNP SFVVGADGFEGGRAIRLALDRNNDYRPYMVWAVDGPAGFAGNFTTDGTNAYWMDTRGHLWGATLHKGHEPTGWGTYSIPL PALIGAKAAFTNTEPAVEVRQTPDGPETHLYVTLRNYSDTGAGLRDGPTGSDGAVVAIGSSGELKWYRKFGPADRLDGRM ASLNTAPLALVSRGALLFGDVNGFFYSYSLDNGNPSGGSARAALIHPESRTPVDRLFLLKAGERPNVGPYNFSQVSGVGV DPAFAHGLLLVGVNFETDGGTSGRLVAFRTGESYDLRWLDAPAPLELTPGTPVALEPRLQLEMTTRTLAALCPGPWTVRW FVTDADGQLVRPLGEVPLPGELGPQQPYPVPLTVTLAEGDPAEGWIVGVIDLPTVYALSTAHTSNPKVALARGMAAAQGL PAEKTCAGAVAELIERKGEPGPEGGLANNVLIVPYAIRQPAQVVVDDPSVVDLAVPSMADAGRPFEVGIYLGYQNNLGRS AIRVPLRLWARPESGGSAPAGGWQTVTIDRMPCCTLKTGTIPGLSAGTWEIVAEIDYPEDTRPENNRVIRRVEVLSSKPV EAGGPEGGAITD
Sequences:
>Translated_812_residues MLISTGQAGAEDWITKGGTPQRMSVVAEPLGLTEITVYWETKPLGESATQPAVVNGVIYHLAGPYLWRLELDQLGRPKGD ATAVTDPVKAYKIEFNRPPGGPVIAPQSSPTYSPDSGVLYFGTGYGWLWAYNTREGWYRPAELDLGCPIVGSPLVIHDRG RDIVVVADRPNYPGEEDRPVGRPLCPRSHGKVWVVQGLDRPDDVVRWQNYQAPTTKQAEDGFGGYITPSAVSAPVHGLNP SFVVGADGFEGGRAIRLALDRNNDYRPYMVWAVDGPAGFAGNFTTDGTNAYWMDTRGHLWGATLHKGHEPTGWGTYSIPL PALIGAKAAFTNTEPAVEVRQTPDGPETHLYVTLRNYSDTGAGLRDGPTGSDGAVVAIGSSGELKWYRKFGPADRLDGRM ASLNTAPLALVSRGALLFGDVNGFFYSYSLDNGNPSGGSARAALIHPESRTPVDRLFLLKAGERPNVGPYNFSQVSGVGV DPAFAHGLLLVGVNFETDGGTSGRLVAFRTGESYDLRWLDAPAPLELTPGTPVALEPRLQLEMTTRTLAALCPGPWTVRW FVTDADGQLVRPLGEVPLPGELGPQQPYPVPLTVTLAEGDPAEGWIVGVIDLPTVYALSTAHTSNPKVALARGMAAAQGL PAEKTCAGAVAELIERKGEPGPEGGLANNVLIVPYAIRQPAQVVVDDPSVVDLAVPSMADAGRPFEVGIYLGYQNNLGRS AIRVPLRLWARPESGGSAPAGGWQTVTIDRMPCCTLKTGTIPGLSAGTWEIVAEIDYPEDTRPENNRVIRRVEVLSSKPV EAGGPEGGAITD >Mature_812_residues MLISTGQAGAEDWITKGGTPQRMSVVAEPLGLTEITVYWETKPLGESATQPAVVNGVIYHLAGPYLWRLELDQLGRPKGD ATAVTDPVKAYKIEFNRPPGGPVIAPQSSPTYSPDSGVLYFGTGYGWLWAYNTREGWYRPAELDLGCPIVGSPLVIHDRG RDIVVVADRPNYPGEEDRPVGRPLCPRSHGKVWVVQGLDRPDDVVRWQNYQAPTTKQAEDGFGGYITPSAVSAPVHGLNP SFVVGADGFEGGRAIRLALDRNNDYRPYMVWAVDGPAGFAGNFTTDGTNAYWMDTRGHLWGATLHKGHEPTGWGTYSIPL PALIGAKAAFTNTEPAVEVRQTPDGPETHLYVTLRNYSDTGAGLRDGPTGSDGAVVAIGSSGELKWYRKFGPADRLDGRM ASLNTAPLALVSRGALLFGDVNGFFYSYSLDNGNPSGGSARAALIHPESRTPVDRLFLLKAGERPNVGPYNFSQVSGVGV DPAFAHGLLLVGVNFETDGGTSGRLVAFRTGESYDLRWLDAPAPLELTPGTPVALEPRLQLEMTTRTLAALCPGPWTVRW FVTDADGQLVRPLGEVPLPGELGPQQPYPVPLTVTLAEGDPAEGWIVGVIDLPTVYALSTAHTSNPKVALARGMAAAQGL PAEKTCAGAVAELIERKGEPGPEGGLANNVLIVPYAIRQPAQVVVDDPSVVDLAVPSMADAGRPFEVGIYLGYQNNLGRS AIRVPLRLWARPESGGSAPAGGWQTVTIDRMPCCTLKTGTIPGLSAGTWEIVAEIDYPEDTRPENNRVIRRVEVLSSKPV EAGGPEGGAITD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 86623; Mature: 86623
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLISTGQAGAEDWITKGGTPQRMSVVAEPLGLTEITVYWETKPLGESATQPAVVNGVIYH CEEECCCCCHHHHHHCCCCCHHHHEEECCCCCEEEEEEEECCCCCCCCCCCHHHHEEEEE LAGPYLWRLELDQLGRPKGDATAVTDPVKAYKIEFNRPPGGPVIAPQSSPTYSPDSGVLY CCCCEEEEEEHHHCCCCCCCCCEECCCCEEEEEEECCCCCCCEECCCCCCCCCCCCCEEE FGTGYGWLWAYNTREGWYRPAELDLGCPIVGSPLVIHDRGRDIVVVADRPNYPGEEDRPV EECCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEECCCCCCCCCCCCC GRPLCPRSHGKVWVVQGLDRPDDVVRWQNYQAPTTKQAEDGFGGYITPSAVSAPVHGLNP CCCCCCCCCCCEEEEECCCCCHHHHEECCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCC SFVVGADGFEGGRAIRLALDRNNDYRPYMVWAVDGPAGFAGNFTTDGTNAYWMDTRGHLW CEEEECCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEECCCCCEE GATLHKGHEPTGWGTYSIPLPALIGAKAAFTNTEPAVEVRQTPDGPETHLYVTLRNYSDT EEHHHCCCCCCCCEEEECCCHHHHCCCEEECCCCCCEEEEECCCCCCEEEEEEEECCCCC GAGLRDGPTGSDGAVVAIGSSGELKWYRKFGPADRLDGRMASLNTAPLALVSRGALLFGD CCCCCCCCCCCCCEEEEECCCCCEEEEECCCCHHHCCCEEEECCCCCCHHHCCCEEEEEE VNGFFYSYSLDNGNPSGGSARAALIHPESRTPVDRLFLLKAGERPNVGPYNFSQVSGVGV CCCEEEEEEECCCCCCCCCEEEEEECCCCCCCHHEEEEEECCCCCCCCCCCHHHCCCCCC DPAFAHGLLLVGVNFETDGGTSGRLVAFRTGESYDLRWLDAPAPLELTPGTPVALEPRLQ CHHHHCCEEEEEEEEECCCCCCCCEEEEECCCCCEEEEECCCCCEEECCCCCEEECCCEE LEMTTRTLAALCPGPWTVRWFVTDADGQLVRPLGEVPLPGELGPQQPYPVPLTVTLAEGD EEEHHHHHHHHCCCCEEEEEEEECCCCCEEHHCCCCCCCCCCCCCCCCCEEEEEEEECCC PAEGWIVGVIDLPTVYALSTAHTSNPKVALARGMAAAQGLPAEKTCAGAVAELIERKGEP CCCCEEEEEEECCCEEEEEECCCCCCCEEEECCHHHHCCCCCHHHHHHHHHHHHHHCCCC GPEGGLANNVLIVPYAIRQPAQVVVDDPSVVDLAVPSMADAGRPFEVGIYLGYQNNLGRS CCCCCCCCCEEEEEEECCCCCEEEECCCCEEEEECCCHHCCCCCEEEEEEEEECCCCCCC AIRVPLRLWARPESGGSAPAGGWQTVTIDRMPCCTLKTGTIPGLSAGTWEIVAEIDYPED CEEEEEEEEECCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCCCCCCEEEEEEECCCCC TRPENNRVIRRVEVLSSKPVEAGGPEGGAITD CCCCCCCEEEEEEHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLISTGQAGAEDWITKGGTPQRMSVVAEPLGLTEITVYWETKPLGESATQPAVVNGVIYH CEEECCCCCHHHHHHCCCCCHHHHEEECCCCCEEEEEEEECCCCCCCCCCCHHHHEEEEE LAGPYLWRLELDQLGRPKGDATAVTDPVKAYKIEFNRPPGGPVIAPQSSPTYSPDSGVLY CCCCEEEEEEHHHCCCCCCCCCEECCCCEEEEEEECCCCCCCEECCCCCCCCCCCCCEEE FGTGYGWLWAYNTREGWYRPAELDLGCPIVGSPLVIHDRGRDIVVVADRPNYPGEEDRPV EECCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEECCCCCCCCCCCCC GRPLCPRSHGKVWVVQGLDRPDDVVRWQNYQAPTTKQAEDGFGGYITPSAVSAPVHGLNP CCCCCCCCCCCEEEEECCCCCHHHHEECCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCC SFVVGADGFEGGRAIRLALDRNNDYRPYMVWAVDGPAGFAGNFTTDGTNAYWMDTRGHLW CEEEECCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEECCCCCEE GATLHKGHEPTGWGTYSIPLPALIGAKAAFTNTEPAVEVRQTPDGPETHLYVTLRNYSDT EEHHHCCCCCCCCEEEECCCHHHHCCCEEECCCCCCEEEEECCCCCCEEEEEEEECCCCC GAGLRDGPTGSDGAVVAIGSSGELKWYRKFGPADRLDGRMASLNTAPLALVSRGALLFGD CCCCCCCCCCCCCEEEEECCCCCEEEEECCCCHHHCCCEEEECCCCCCHHHCCCEEEEEE VNGFFYSYSLDNGNPSGGSARAALIHPESRTPVDRLFLLKAGERPNVGPYNFSQVSGVGV CCCEEEEEEECCCCCCCCCEEEEEECCCCCCCHHEEEEEECCCCCCCCCCCHHHCCCCCC DPAFAHGLLLVGVNFETDGGTSGRLVAFRTGESYDLRWLDAPAPLELTPGTPVALEPRLQ CHHHHCCEEEEEEEEECCCCCCCCEEEEECCCCCEEEEECCCCCEEECCCCCEEECCCEE LEMTTRTLAALCPGPWTVRWFVTDADGQLVRPLGEVPLPGELGPQQPYPVPLTVTLAEGD EEEHHHHHHHHCCCCEEEEEEEECCCCCEEHHCCCCCCCCCCCCCCCCCEEEEEEEECCC PAEGWIVGVIDLPTVYALSTAHTSNPKVALARGMAAAQGLPAEKTCAGAVAELIERKGEP CCCCEEEEEEECCCEEEEEECCCCCCCEEEECCHHHHCCCCCHHHHHHHHHHHHHHCCCC GPEGGLANNVLIVPYAIRQPAQVVVDDPSVVDLAVPSMADAGRPFEVGIYLGYQNNLGRS CCCCCCCCCEEEEEEECCCCCEEEECCCCEEEEECCCHHCCCCCEEEEEEEEECCCCCCC AIRVPLRLWARPESGGSAPAGGWQTVTIDRMPCCTLKTGTIPGLSAGTWEIVAEIDYPED CEEEEEEEEECCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCCCCCCEEEEEEECCCCC TRPENNRVIRRVEVLSSKPVEAGGPEGGAITD CCCCCCCEEEEEEHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA