Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51893351

Identifier: 51893351

GI number: 51893351

Start: 2374449

End: 2376887

Strand: Reverse

Name: 51893351

Synonym: STH2213

Alternate gene names: NA

Gene position: 2376887-2374449 (Counterclockwise)

Preceding gene: 51893352

Following gene: 51893349

Centisome position: 66.65

GC content: 68.76

Gene sequence:

>2439_bases
GTGCTGATAAGCACGGGCCAGGCTGGGGCGGAGGACTGGATCACCAAGGGCGGTACGCCGCAGCGTATGTCGGTGGTGGC
GGAACCGCTTGGCCTGACAGAGATCACGGTCTACTGGGAGACGAAGCCGCTGGGCGAGAGCGCCACACAGCCAGCGGTGG
TGAACGGCGTCATCTACCACTTGGCGGGTCCCTACCTCTGGCGTCTGGAGTTGGATCAACTGGGCCGGCCGAAGGGGGAC
GCCACCGCGGTCACCGACCCGGTAAAGGCGTACAAGATTGAGTTCAACCGGCCGCCCGGCGGTCCTGTAATCGCCCCGCA
GTCCAGTCCGACCTACAGCCCGGACTCGGGGGTGCTGTACTTCGGCACCGGATATGGTTGGCTCTGGGCCTATAACACCA
GGGAGGGGTGGTACCGCCCCGCTGAACTGGACCTGGGTTGCCCCATCGTTGGATCGCCTCTCGTCATCCACGATCGGGGG
CGGGATATCGTGGTGGTTGCCGACAGGCCCAATTACCCAGGAGAGGAGGATCGACCGGTAGGGAGGCCGCTTTGTCCCCG
TAGCCACGGCAAGGTCTGGGTGGTTCAGGGACTGGACCGACCAGACGACGTAGTTCGATGGCAGAACTATCAGGCTCCAA
CCACGAAACAGGCCGAAGATGGCTTTGGGGGGTATATCACACCATCGGCCGTATCCGCCCCAGTCCACGGGCTAAATCCA
AGTTTCGTTGTTGGTGCGGATGGCTTTGAAGGTGGAAGGGCAATCCGGCTCGCCTTGGACCGAAACAACGACTACCGGCC
CTACATGGTCTGGGCCGTCGACGGCCCCGCAGGCTTCGCGGGCAACTTCACCACAGACGGCACCAACGCCTATTGGATGG
ACACCCGCGGCCACTTGTGGGGAGCTACCCTCCACAAGGGTCATGAACCCACAGGCTGGGGCACCTACTCCATCCCCCTA
CCCGCCCTCATCGGCGCCAAGGCCGCGTTCACCAACACCGAACCCGCGGTGGAGGTCCGCCAGACCCCGGACGGCCCCGA
AACCCACCTCTACGTCACCCTGCGCAACTACAGCGACACCGGGGCCGGCCTCCGGGACGGCCCCACCGGCAGCGACGGCG
CCGTGGTGGCCATTGGCTCCAGCGGCGAGCTCAAGTGGTATCGCAAGTTCGGCCCTGCTGACCGGCTCGACGGGCGGATG
GCCTCCCTCAACACCGCCCCCCTCGCCCTGGTCAGCCGCGGGGCGCTCCTCTTCGGCGACGTCAACGGCTTCTTCTACAG
CTACTCCCTGGACAACGGCAACCCCAGCGGCGGCTCCGCCCGGGCGGCGCTGATCCACCCGGAGAGCCGTACCCCCGTCG
ACCGGCTGTTCCTGCTGAAGGCTGGGGAGCGGCCAAACGTCGGTCCGTACAACTTCTCCCAGGTCTCCGGCGTCGGCGTC
GACCCCGCCTTCGCCCACGGCCTCCTGCTGGTCGGCGTCAACTTCGAGACCGACGGCGGAACCTCCGGCCGCCTGGTGGC
CTTCCGGACGGGGGAGAGCTACGACCTGCGGTGGCTGGATGCGCCCGCTCCGCTGGAACTGACCCCGGGCACGCCGGTTG
CGCTGGAGCCGCGGCTGCAGCTGGAGATGACCACGCGCACCCTTGCAGCCCTTTGCCCGGGTCCCTGGACCGTGCGCTGG
TTCGTGACGGACGCGGACGGCCAGTTGGTCCGCCCGCTGGGGGAGGTGCCGCTGCCGGGAGAGCTGGGGCCGCAGCAACC
CTACCCGGTGCCGCTCACGGTGACCCTGGCCGAGGGGGATCCGGCCGAGGGCTGGATTGTCGGGGTCATCGATCTGCCCA
CCGTGTACGCCCTGAGCACGGCCCACACGTCCAACCCCAAGGTCGCGCTGGCTAGGGGGATGGCCGCGGCGCAGGGGCTG
CCGGCGGAGAAGACCTGCGCCGGCGCGGTGGCCGAGCTGATTGAGCGGAAGGGGGAGCCCGGCCCCGAGGGCGGGCTGGC
CAACAACGTGCTCATCGTGCCCTACGCGATCCGGCAGCCTGCGCAGGTCGTCGTCGACGACCCGTCGGTGGTGGACCTGG
CCGTGCCGTCGATGGCCGACGCGGGCCGGCCGTTCGAGGTGGGGATCTACCTCGGGTACCAGAACAACCTCGGTCGCAGC
GCGATCCGGGTCCCGCTCCGGCTCTGGGCGCGGCCGGAGTCCGGCGGGTCGGCGCCGGCCGGGGGATGGCAGACGGTGAC
CATCGACCGGATGCCCTGCTGCACCCTCAAGACGGGCACGATCCCGGGGCTGAGCGCGGGCACCTGGGAGATCGTCGCCG
AGATCGACTACCCGGAGGACACCCGGCCGGAGAACAACCGGGTGATCCGCCGGGTGGAGGTGCTCTCGTCCAAGCCTGTG
GAGGCGGGCGGCCCGGAGGGAGGGGCGATCACGGACTGA

Upstream 100 bases:

>100_bases
TACCCGAGCTGGTACTTAGAAAACCGGGCTGTTCGGTACTGAGGGGGATCGACAGATGCACTGGAGACGCTGGCTCGCAG
GGCCACTTGCGCTTCTCTTG

Downstream 100 bases:

>100_bases
TCCCGCACGCCCCAACCCCCGGCGCGGGCGGCCCGCACGCCCGGGCCGCGCCCAGCACGGGGCGGCATGAGCGACTGCAC
CCATGCGCAACACGGGAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 812; Mature: 812

Protein sequence:

>812_residues
MLISTGQAGAEDWITKGGTPQRMSVVAEPLGLTEITVYWETKPLGESATQPAVVNGVIYHLAGPYLWRLELDQLGRPKGD
ATAVTDPVKAYKIEFNRPPGGPVIAPQSSPTYSPDSGVLYFGTGYGWLWAYNTREGWYRPAELDLGCPIVGSPLVIHDRG
RDIVVVADRPNYPGEEDRPVGRPLCPRSHGKVWVVQGLDRPDDVVRWQNYQAPTTKQAEDGFGGYITPSAVSAPVHGLNP
SFVVGADGFEGGRAIRLALDRNNDYRPYMVWAVDGPAGFAGNFTTDGTNAYWMDTRGHLWGATLHKGHEPTGWGTYSIPL
PALIGAKAAFTNTEPAVEVRQTPDGPETHLYVTLRNYSDTGAGLRDGPTGSDGAVVAIGSSGELKWYRKFGPADRLDGRM
ASLNTAPLALVSRGALLFGDVNGFFYSYSLDNGNPSGGSARAALIHPESRTPVDRLFLLKAGERPNVGPYNFSQVSGVGV
DPAFAHGLLLVGVNFETDGGTSGRLVAFRTGESYDLRWLDAPAPLELTPGTPVALEPRLQLEMTTRTLAALCPGPWTVRW
FVTDADGQLVRPLGEVPLPGELGPQQPYPVPLTVTLAEGDPAEGWIVGVIDLPTVYALSTAHTSNPKVALARGMAAAQGL
PAEKTCAGAVAELIERKGEPGPEGGLANNVLIVPYAIRQPAQVVVDDPSVVDLAVPSMADAGRPFEVGIYLGYQNNLGRS
AIRVPLRLWARPESGGSAPAGGWQTVTIDRMPCCTLKTGTIPGLSAGTWEIVAEIDYPEDTRPENNRVIRRVEVLSSKPV
EAGGPEGGAITD

Sequences:

>Translated_812_residues
MLISTGQAGAEDWITKGGTPQRMSVVAEPLGLTEITVYWETKPLGESATQPAVVNGVIYHLAGPYLWRLELDQLGRPKGD
ATAVTDPVKAYKIEFNRPPGGPVIAPQSSPTYSPDSGVLYFGTGYGWLWAYNTREGWYRPAELDLGCPIVGSPLVIHDRG
RDIVVVADRPNYPGEEDRPVGRPLCPRSHGKVWVVQGLDRPDDVVRWQNYQAPTTKQAEDGFGGYITPSAVSAPVHGLNP
SFVVGADGFEGGRAIRLALDRNNDYRPYMVWAVDGPAGFAGNFTTDGTNAYWMDTRGHLWGATLHKGHEPTGWGTYSIPL
PALIGAKAAFTNTEPAVEVRQTPDGPETHLYVTLRNYSDTGAGLRDGPTGSDGAVVAIGSSGELKWYRKFGPADRLDGRM
ASLNTAPLALVSRGALLFGDVNGFFYSYSLDNGNPSGGSARAALIHPESRTPVDRLFLLKAGERPNVGPYNFSQVSGVGV
DPAFAHGLLLVGVNFETDGGTSGRLVAFRTGESYDLRWLDAPAPLELTPGTPVALEPRLQLEMTTRTLAALCPGPWTVRW
FVTDADGQLVRPLGEVPLPGELGPQQPYPVPLTVTLAEGDPAEGWIVGVIDLPTVYALSTAHTSNPKVALARGMAAAQGL
PAEKTCAGAVAELIERKGEPGPEGGLANNVLIVPYAIRQPAQVVVDDPSVVDLAVPSMADAGRPFEVGIYLGYQNNLGRS
AIRVPLRLWARPESGGSAPAGGWQTVTIDRMPCCTLKTGTIPGLSAGTWEIVAEIDYPEDTRPENNRVIRRVEVLSSKPV
EAGGPEGGAITD
>Mature_812_residues
MLISTGQAGAEDWITKGGTPQRMSVVAEPLGLTEITVYWETKPLGESATQPAVVNGVIYHLAGPYLWRLELDQLGRPKGD
ATAVTDPVKAYKIEFNRPPGGPVIAPQSSPTYSPDSGVLYFGTGYGWLWAYNTREGWYRPAELDLGCPIVGSPLVIHDRG
RDIVVVADRPNYPGEEDRPVGRPLCPRSHGKVWVVQGLDRPDDVVRWQNYQAPTTKQAEDGFGGYITPSAVSAPVHGLNP
SFVVGADGFEGGRAIRLALDRNNDYRPYMVWAVDGPAGFAGNFTTDGTNAYWMDTRGHLWGATLHKGHEPTGWGTYSIPL
PALIGAKAAFTNTEPAVEVRQTPDGPETHLYVTLRNYSDTGAGLRDGPTGSDGAVVAIGSSGELKWYRKFGPADRLDGRM
ASLNTAPLALVSRGALLFGDVNGFFYSYSLDNGNPSGGSARAALIHPESRTPVDRLFLLKAGERPNVGPYNFSQVSGVGV
DPAFAHGLLLVGVNFETDGGTSGRLVAFRTGESYDLRWLDAPAPLELTPGTPVALEPRLQLEMTTRTLAALCPGPWTVRW
FVTDADGQLVRPLGEVPLPGELGPQQPYPVPLTVTLAEGDPAEGWIVGVIDLPTVYALSTAHTSNPKVALARGMAAAQGL
PAEKTCAGAVAELIERKGEPGPEGGLANNVLIVPYAIRQPAQVVVDDPSVVDLAVPSMADAGRPFEVGIYLGYQNNLGRS
AIRVPLRLWARPESGGSAPAGGWQTVTIDRMPCCTLKTGTIPGLSAGTWEIVAEIDYPEDTRPENNRVIRRVEVLSSKPV
EAGGPEGGAITD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 86623; Mature: 86623

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLISTGQAGAEDWITKGGTPQRMSVVAEPLGLTEITVYWETKPLGESATQPAVVNGVIYH
CEEECCCCCHHHHHHCCCCCHHHHEEECCCCCEEEEEEEECCCCCCCCCCCHHHHEEEEE
LAGPYLWRLELDQLGRPKGDATAVTDPVKAYKIEFNRPPGGPVIAPQSSPTYSPDSGVLY
CCCCEEEEEEHHHCCCCCCCCCEECCCCEEEEEEECCCCCCCEECCCCCCCCCCCCCEEE
FGTGYGWLWAYNTREGWYRPAELDLGCPIVGSPLVIHDRGRDIVVVADRPNYPGEEDRPV
EECCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEECCCCCCCCCCCCC
GRPLCPRSHGKVWVVQGLDRPDDVVRWQNYQAPTTKQAEDGFGGYITPSAVSAPVHGLNP
CCCCCCCCCCCEEEEECCCCCHHHHEECCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCC
SFVVGADGFEGGRAIRLALDRNNDYRPYMVWAVDGPAGFAGNFTTDGTNAYWMDTRGHLW
CEEEECCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEECCCCCEE
GATLHKGHEPTGWGTYSIPLPALIGAKAAFTNTEPAVEVRQTPDGPETHLYVTLRNYSDT
EEHHHCCCCCCCCEEEECCCHHHHCCCEEECCCCCCEEEEECCCCCCEEEEEEEECCCCC
GAGLRDGPTGSDGAVVAIGSSGELKWYRKFGPADRLDGRMASLNTAPLALVSRGALLFGD
CCCCCCCCCCCCCEEEEECCCCCEEEEECCCCHHHCCCEEEECCCCCCHHHCCCEEEEEE
VNGFFYSYSLDNGNPSGGSARAALIHPESRTPVDRLFLLKAGERPNVGPYNFSQVSGVGV
CCCEEEEEEECCCCCCCCCEEEEEECCCCCCCHHEEEEEECCCCCCCCCCCHHHCCCCCC
DPAFAHGLLLVGVNFETDGGTSGRLVAFRTGESYDLRWLDAPAPLELTPGTPVALEPRLQ
CHHHHCCEEEEEEEEECCCCCCCCEEEEECCCCCEEEEECCCCCEEECCCCCEEECCCEE
LEMTTRTLAALCPGPWTVRWFVTDADGQLVRPLGEVPLPGELGPQQPYPVPLTVTLAEGD
EEEHHHHHHHHCCCCEEEEEEEECCCCCEEHHCCCCCCCCCCCCCCCCCEEEEEEEECCC
PAEGWIVGVIDLPTVYALSTAHTSNPKVALARGMAAAQGLPAEKTCAGAVAELIERKGEP
CCCCEEEEEEECCCEEEEEECCCCCCCEEEECCHHHHCCCCCHHHHHHHHHHHHHHCCCC
GPEGGLANNVLIVPYAIRQPAQVVVDDPSVVDLAVPSMADAGRPFEVGIYLGYQNNLGRS
CCCCCCCCCEEEEEEECCCCCEEEECCCCEEEEECCCHHCCCCCEEEEEEEEECCCCCCC
AIRVPLRLWARPESGGSAPAGGWQTVTIDRMPCCTLKTGTIPGLSAGTWEIVAEIDYPED
CEEEEEEEEECCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCCCCCCEEEEEEECCCCC
TRPENNRVIRRVEVLSSKPVEAGGPEGGAITD
CCCCCCCEEEEEEHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLISTGQAGAEDWITKGGTPQRMSVVAEPLGLTEITVYWETKPLGESATQPAVVNGVIYH
CEEECCCCCHHHHHHCCCCCHHHHEEECCCCCEEEEEEEECCCCCCCCCCCHHHHEEEEE
LAGPYLWRLELDQLGRPKGDATAVTDPVKAYKIEFNRPPGGPVIAPQSSPTYSPDSGVLY
CCCCEEEEEEHHHCCCCCCCCCEECCCCEEEEEEECCCCCCCEECCCCCCCCCCCCCEEE
FGTGYGWLWAYNTREGWYRPAELDLGCPIVGSPLVIHDRGRDIVVVADRPNYPGEEDRPV
EECCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEECCCCCCCCCCCCC
GRPLCPRSHGKVWVVQGLDRPDDVVRWQNYQAPTTKQAEDGFGGYITPSAVSAPVHGLNP
CCCCCCCCCCCEEEEECCCCCHHHHEECCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCC
SFVVGADGFEGGRAIRLALDRNNDYRPYMVWAVDGPAGFAGNFTTDGTNAYWMDTRGHLW
CEEEECCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEECCCCCEE
GATLHKGHEPTGWGTYSIPLPALIGAKAAFTNTEPAVEVRQTPDGPETHLYVTLRNYSDT
EEHHHCCCCCCCCEEEECCCHHHHCCCEEECCCCCCEEEEECCCCCCEEEEEEEECCCCC
GAGLRDGPTGSDGAVVAIGSSGELKWYRKFGPADRLDGRMASLNTAPLALVSRGALLFGD
CCCCCCCCCCCCCEEEEECCCCCEEEEECCCCHHHCCCEEEECCCCCCHHHCCCEEEEEE
VNGFFYSYSLDNGNPSGGSARAALIHPESRTPVDRLFLLKAGERPNVGPYNFSQVSGVGV
CCCEEEEEEECCCCCCCCCEEEEEECCCCCCCHHEEEEEECCCCCCCCCCCHHHCCCCCC
DPAFAHGLLLVGVNFETDGGTSGRLVAFRTGESYDLRWLDAPAPLELTPGTPVALEPRLQ
CHHHHCCEEEEEEEEECCCCCCCCEEEEECCCCCEEEEECCCCCEEECCCCCEEECCCEE
LEMTTRTLAALCPGPWTVRWFVTDADGQLVRPLGEVPLPGELGPQQPYPVPLTVTLAEGD
EEEHHHHHHHHCCCCEEEEEEEECCCCCEEHHCCCCCCCCCCCCCCCCCEEEEEEEECCC
PAEGWIVGVIDLPTVYALSTAHTSNPKVALARGMAAAQGLPAEKTCAGAVAELIERKGEP
CCCCEEEEEEECCCEEEEEECCCCCCCEEEECCHHHHCCCCCHHHHHHHHHHHHHHCCCC
GPEGGLANNVLIVPYAIRQPAQVVVDDPSVVDLAVPSMADAGRPFEVGIYLGYQNNLGRS
CCCCCCCCCEEEEEEECCCCCEEEECCCCEEEEECCCHHCCCCCEEEEEEEEECCCCCCC
AIRVPLRLWARPESGGSAPAGGWQTVTIDRMPCCTLKTGTIPGLSAGTWEIVAEIDYPED
CEEEEEEEEECCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCCCCCCEEEEEEECCCCC
TRPENNRVIRRVEVLSSKPVEAGGPEGGAITD
CCCCCCCEEEEEEHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA