Click here to switch to the map view.

The map label for this gene is 51893325

Identifier: 51893325

GI number: 51893325

Start: 2342565

End: 2343845

Strand: Reverse

Name: 51893325

Synonym: STH2187

Alternate gene names: NA

Gene position: 2343845-2342565 (Counterclockwise)

Preceding gene: 51893326

Following gene: 51893322

Centisome position: 65.73

GC content: 72.6

Gene sequence:

>1281_bases
GTGTGGCCGCAGCCGGACTCCCTGGTGCTGTACCAGGACCTGTTCGCCGGCGGCCCCGGCGCGGCGATGGCGGCCTTCCT
GCGGGCGCTGCCCCAAGGGGGTGAGGCCGCACGGGGGGCCTATCTGGATCTGGTGCGGGCGCTGTACCGGGCGGGCGACC
TGCCGGGGCCGACCGGCGACGCCTGGCAGGATTACGTGATCCACGGCGTCCTGTGTGCCGACAACGCCTTCACCCGGGCT
GCCGCGGCCGGAACCGTCAGCGGACCGCTCCGGGACGCGGCTGCGTGGGACCTGATGCACCTGCAGCGGTGTTTTCGGCT
CTCCCGACTTCGGACTCGGGCGCTTCTGGGGGGCGGCGTGGCGGACGAACAGCTGCCCACCTGGGCAGGCCGGCCCGAGG
CGGATGGGGCCGGACCGTTCGCCTCTCCCGCCTTCCGGTCCATGGCGCACAGGCTGGCCCGCGCGGAGGCGTGGGCGGAG
CTGGTGGACGATCTGGCGGCCTTCCACCGCGCACAGGGATTCGGCCCGGTGGCCCGCACCTGGTTCCTGGCGTGGGATGG
CGCCACCCTGCTGCCCGTGGAGGAGCCCGACCTGGTGGACCTGGACGACCTGGCCGGTCTGGAGGAGCAGAAGGCGGCCA
TCCGGGAGAACACGGAGGCCTTCCTGCGGGGGGGCGTCGGCCAGAATCTGCTGCTCTACGGGCCGCGGGGAACGGGGAAG
TCGTCGCTGGTGCGCGCGCTGGCGCTGCGGTACGGGGAAGCCGGACTCCGCCTGGTGGAGGTGAGCCGGGACAGGCTCGG
CAGCCTGGGCGACCTGTACCGCACCGTGCGCCGGTATCCGCAGCGGTTTGTGCTCTTCCTGGACGACCTCACGTTCGAGG
CCGACGACGCCGGTTACCGGGCGTTCAAATCGCTGCTGGAGGGCGCACTGGCGCGGCGCCCGCCCAACCTGGTGCTGTAC
GTGACGACCAATCGCCGCCATATGGTGCCCGAGCGCTGGTCCGACCGGAACGGCCCGGAGGAGGCGGAGGTGCACGGCCA
GGATGCCCTGGAGGAGCGTCTGTCGCTGGCCGACCGGTTCGGGCGGACCATCCTGTTCCTGCGCCCGGACCAGGAGGAGT
ACTTGCGGATCGTCGAGCATCTGGCCGCCCGCAGGGGCCTGCCCGTCGGGCGGGAGGAGCTGCGGGAGGCTGCCCGTCGG
TGGGCCCTGTGGCAGAACGGGCTGTCGGGCCGGACCGCGCGGCACTTCGTGGACGAGTTGGAAGCGAGGCTGAGAGCATG
A

Upstream 100 bases:

>100_bases
TGCAGAAGCGACTGGGCTCGACGACCGGTTGAGGGAAGAGGAATCGGACCCGTCCCCGGCCAATCCCCCCTCAGGGGGGG
AAATGGCGATGGATGACTCG

Downstream 100 bases:

>100_bases
CCGGACCGGCCGCCCCGGGGTGGGCGGCCGGTCCGATGACGTTCGCCGGCCGGGCGGGGGCGTTTCCCGAGCCGAAAAGG
CGAGTAGTGAAAACATGTAG

Product: hypothetical protein

Products: NA

Alternate protein names: ATP-Dependent Protease Subunit; AAA ATPase Family Protein; AAA Family ATPase; ABC Transporter ATPase; ATPase Family Protein; ATPase Of AAA+ Class; AAA ATPase Superfamily; Intermediate Filament Protein; AAA+ Superfamily ATPase

Number of amino acids: Translated: 426; Mature: 426

Protein sequence:

>426_residues
MWPQPDSLVLYQDLFAGGPGAAMAAFLRALPQGGEAARGAYLDLVRALYRAGDLPGPTGDAWQDYVIHGVLCADNAFTRA
AAAGTVSGPLRDAAAWDLMHLQRCFRLSRLRTRALLGGGVADEQLPTWAGRPEADGAGPFASPAFRSMAHRLARAEAWAE
LVDDLAAFHRAQGFGPVARTWFLAWDGATLLPVEEPDLVDLDDLAGLEEQKAAIRENTEAFLRGGVGQNLLLYGPRGTGK
SSLVRALALRYGEAGLRLVEVSRDRLGSLGDLYRTVRRYPQRFVLFLDDLTFEADDAGYRAFKSLLEGALARRPPNLVLY
VTTNRRHMVPERWSDRNGPEEAEVHGQDALEERLSLADRFGRTILFLRPDQEEYLRIVEHLAARRGLPVGREELREAARR
WALWQNGLSGRTARHFVDELEARLRA

Sequences:

>Translated_426_residues
MWPQPDSLVLYQDLFAGGPGAAMAAFLRALPQGGEAARGAYLDLVRALYRAGDLPGPTGDAWQDYVIHGVLCADNAFTRA
AAAGTVSGPLRDAAAWDLMHLQRCFRLSRLRTRALLGGGVADEQLPTWAGRPEADGAGPFASPAFRSMAHRLARAEAWAE
LVDDLAAFHRAQGFGPVARTWFLAWDGATLLPVEEPDLVDLDDLAGLEEQKAAIRENTEAFLRGGVGQNLLLYGPRGTGK
SSLVRALALRYGEAGLRLVEVSRDRLGSLGDLYRTVRRYPQRFVLFLDDLTFEADDAGYRAFKSLLEGALARRPPNLVLY
VTTNRRHMVPERWSDRNGPEEAEVHGQDALEERLSLADRFGRTILFLRPDQEEYLRIVEHLAARRGLPVGREELREAARR
WALWQNGLSGRTARHFVDELEARLRA
>Mature_426_residues
MWPQPDSLVLYQDLFAGGPGAAMAAFLRALPQGGEAARGAYLDLVRALYRAGDLPGPTGDAWQDYVIHGVLCADNAFTRA
AAAGTVSGPLRDAAAWDLMHLQRCFRLSRLRTRALLGGGVADEQLPTWAGRPEADGAGPFASPAFRSMAHRLARAEAWAE
LVDDLAAFHRAQGFGPVARTWFLAWDGATLLPVEEPDLVDLDDLAGLEEQKAAIRENTEAFLRGGVGQNLLLYGPRGTGK
SSLVRALALRYGEAGLRLVEVSRDRLGSLGDLYRTVRRYPQRFVLFLDDLTFEADDAGYRAFKSLLEGALARRPPNLVLY
VTTNRRHMVPERWSDRNGPEEAEVHGQDALEERLSLADRFGRTILFLRPDQEEYLRIVEHLAARRGLPVGREELREAARR
WALWQNGLSGRTARHFVDELEARLRA

Specific function: Unknown

COG id: COG2607

COG function: function code R; Predicted ATPase (AAA+ superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47200; Mature: 47200

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWPQPDSLVLYQDLFAGGPGAAMAAFLRALPQGGEAARGAYLDLVRALYRAGDLPGPTGD
CCCCCCCEEHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC
AWQDYVIHGVLCADNAFTRAAAAGTVSGPLRDAAAWDLMHLQRCFRLSRLRTRALLGGGV
HHHHHHHHHEEECCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
ADEQLPTWAGRPEADGAGPFASPAFRSMAHRLARAEAWAELVDDLAAFHRAQGFGPVART
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
WFLAWDGATLLPVEEPDLVDLDDLAGLEEQKAAIRENTEAFLRGGVGQNLLLYGPRGTGK
EEEEECCCEEECCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCH
SSLVRALALRYGEAGLRLVEVSRDRLGSLGDLYRTVRRYPQRFVLFLDDLTFEADDAGYR
HHHHHHHHHHHCCCCCEEEEECHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
AFKSLLEGALARRPPNLVLYVTTNRRHMVPERWSDRNGPEEAEVHGQDALEERLSLADRF
HHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHC
GRTILFLRPDQEEYLRIVEHLAARRGLPVGREELREAARRWALWQNGLSGRTARHFVDEL
CCEEEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
EARLRA
HHHHCC
>Mature Secondary Structure
MWPQPDSLVLYQDLFAGGPGAAMAAFLRALPQGGEAARGAYLDLVRALYRAGDLPGPTGD
CCCCCCCEEHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC
AWQDYVIHGVLCADNAFTRAAAAGTVSGPLRDAAAWDLMHLQRCFRLSRLRTRALLGGGV
HHHHHHHHHEEECCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
ADEQLPTWAGRPEADGAGPFASPAFRSMAHRLARAEAWAELVDDLAAFHRAQGFGPVART
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
WFLAWDGATLLPVEEPDLVDLDDLAGLEEQKAAIRENTEAFLRGGVGQNLLLYGPRGTGK
EEEEECCCEEECCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCH
SSLVRALALRYGEAGLRLVEVSRDRLGSLGDLYRTVRRYPQRFVLFLDDLTFEADDAGYR
HHHHHHHHHHHCCCCCEEEEECHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
AFKSLLEGALARRPPNLVLYVTTNRRHMVPERWSDRNGPEEAEVHGQDALEERLSLADRF
HHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHC
GRTILFLRPDQEEYLRIVEHLAARRGLPVGREELREAARRWALWQNGLSGRTARHFVDEL
CCEEEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
EARLRA
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA