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The map label for this gene is yidE [C]

Identifier: 51893310

GI number: 51893310

Start: 2314928

End: 2316556

Strand: Reverse

Name: yidE [C]

Synonym: STH2172

Alternate gene names: 51893310

Gene position: 2316556-2314928 (Counterclockwise)

Preceding gene: 51893311

Following gene: 51893309

Centisome position: 64.96

GC content: 70.47

Gene sequence:

>1629_bases
GTGCTAGACATCCTGCGCGACAACCCGCTTCTGCTCCTCTTCATCGTCGCGGGCATCGGGTACCCGCTGGGCCGCGTCCG
GATCGGCGGGATCCACCTGGGCGTGGCGGCGGTGCTTTTCGTCGGTCTGGCCTTCGGCGCGTTGGATCCCAGCCTGAAGT
TGCCGGAGATCGTGTACCAGTTCGGACTGGCCCTGTTCGTCTACTGCGTGGGCCTGAGCAGCGGCCACGGGTTCCTCCGG
TCGTTCCGGGGGAAGGGCGTGATCTATAACCTGCTGACCTTGGGCGTGATCCTCCTGGCCGCGGCGCTGCTGCTCATCCC
GCATTACCTGCTGTCGCTCCGGCCCGGCGAGACGGCGGGCGTCTTCGCCGGCCTGCTCACGTCCACCCCGGCGCTGGCGG
CGGCGGTGGAGTACCTGACCCGAGCCGGGGCCGCCGGGCAGCTCTCCGACCCGGTGGTGGGCTACTCCATCGCCTACCCG
GCCAGCGTCCTGGGGGTCATCCTGGCGATCTACCTGGCCGAGCGCTGCTTCCGCATCGACTACCGGGCGGAGGCCCGCAC
GCTGAAGGACGTGCCGGGCGTCTCGCCCGAGATCACGTGCTGGACCCTGCGGGTGTGCCGGCCCAAGGCGTTCGGACGCA
CGGTGCGGGACCTGGTGGCGGAGCACCGGCTCCAGGTGGTGTTCGGCCGGATCCGGCGGGGTGACCACGCCGACGTGGTG
AGCTGGGAGACCCACCTGGAGGAGGGCGACCTGGTCACCGCCGTCGGCCCGGTGGAGGAGCTGGAGCGGGCCGCGCAGGT
CATCGGCTGCGTCAGCGAGGTCCAGGCGGACCTCGACCGGTCCGAGGTGGACATGCGGGAGGTCTTCGTCTCCAACCCCG
AAGTCGCCGGCCGCACCCTCCGGGAGCTGAACCTGCCCAACCGGTTCGGGGCCGTGGTGTCGCGGGTCTGGCGCGGCGAC
CTGCAGCTCCTCCCGTACGCGGACATGCCGCTGGAGCTGGGCGACCGGGTGCGGGTCCTGTCCCGCCGGGAGCGGCAGCA
GGAGGTGGCCGCGTACCTCGGGGACTCCTACCGGGCGATTTCCGAGATCGACATCGCGGTGCTGGGCCTGGGCATGGCGC
TGGGCATCGGCCTGGGGCTGGTGCCGATCCCGCTGCCCGGCGGCATCACGGTGCGGCTGGGGCTGGCCGGCGGCCCGCTG
ATCGTCGCCCTCTTCCTGGGGGCCCGGCAGCGGACCGGATCGCTGGTCTGGGTGCTGCCCTACTCTGCGAACATGCTGCT
GCGGCAGATGGGGCTGACCATCTTCCTGGCCGCGGTGGGCACCCGGTCGGGTTACGAGTTCGCGCAGATGCTGACCCAAC
CGCGGGGCTGGGCGATCCTCGGCGCGAGCGCGGCGATCATCGTGCTGCTCTCGTGGGTGATGCTCTACGTGGGCTACCGC
TGGCTGCGCATCCCCATGGGGCTGCTGACGGGCATGGTCGCCGGGATGCAGACCCAGTCGGCCACGCTGGGCTTTGCCCT
GGACCAGGCCGGCAACGACCTGCCTACGGTGGGCTACGCGATGGTGTACCCGATGGCGATGGTGGTGAAGATTGTCCTGG
CGCCGGTGATAATTGCGGTATTAACGTAA

Upstream 100 bases:

>100_bases
GGAACAGTGCGGCAGGTCTGAGACAGGAGGATACAGGCGGGCGTTTAAACTCAAAGAGAGGGACTCACTCCCAAGTACTC
CTGTGGAGGCTGCCCGGAAC

Downstream 100 bases:

>100_bases
CAGACGTGGCTTACAATGGGATCATGTACACCTGCAGCGTGCGAGTACAGGTAAGTCCTGGCAGGAACATGTAAGCGTTA
TATAGAACTCGTGTCCTGTC

Product: putative membrane transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 542; Mature: 542

Protein sequence:

>542_residues
MLDILRDNPLLLLFIVAGIGYPLGRVRIGGIHLGVAAVLFVGLAFGALDPSLKLPEIVYQFGLALFVYCVGLSSGHGFLR
SFRGKGVIYNLLTLGVILLAAALLLIPHYLLSLRPGETAGVFAGLLTSTPALAAAVEYLTRAGAAGQLSDPVVGYSIAYP
ASVLGVILAIYLAERCFRIDYRAEARTLKDVPGVSPEITCWTLRVCRPKAFGRTVRDLVAEHRLQVVFGRIRRGDHADVV
SWETHLEEGDLVTAVGPVEELERAAQVIGCVSEVQADLDRSEVDMREVFVSNPEVAGRTLRELNLPNRFGAVVSRVWRGD
LQLLPYADMPLELGDRVRVLSRRERQQEVAAYLGDSYRAISEIDIAVLGLGMALGIGLGLVPIPLPGGITVRLGLAGGPL
IVALFLGARQRTGSLVWVLPYSANMLLRQMGLTIFLAAVGTRSGYEFAQMLTQPRGWAILGASAAIIVLLSWVMLYVGYR
WLRIPMGLLTGMVAGMQTQSATLGFALDQAGNDLPTVGYAMVYPMAMVVKIVLAPVIIAVLT

Sequences:

>Translated_542_residues
MLDILRDNPLLLLFIVAGIGYPLGRVRIGGIHLGVAAVLFVGLAFGALDPSLKLPEIVYQFGLALFVYCVGLSSGHGFLR
SFRGKGVIYNLLTLGVILLAAALLLIPHYLLSLRPGETAGVFAGLLTSTPALAAAVEYLTRAGAAGQLSDPVVGYSIAYP
ASVLGVILAIYLAERCFRIDYRAEARTLKDVPGVSPEITCWTLRVCRPKAFGRTVRDLVAEHRLQVVFGRIRRGDHADVV
SWETHLEEGDLVTAVGPVEELERAAQVIGCVSEVQADLDRSEVDMREVFVSNPEVAGRTLRELNLPNRFGAVVSRVWRGD
LQLLPYADMPLELGDRVRVLSRRERQQEVAAYLGDSYRAISEIDIAVLGLGMALGIGLGLVPIPLPGGITVRLGLAGGPL
IVALFLGARQRTGSLVWVLPYSANMLLRQMGLTIFLAAVGTRSGYEFAQMLTQPRGWAILGASAAIIVLLSWVMLYVGYR
WLRIPMGLLTGMVAGMQTQSATLGFALDQAGNDLPTVGYAMVYPMAMVVKIVLAPVIIAVLT
>Mature_542_residues
MLDILRDNPLLLLFIVAGIGYPLGRVRIGGIHLGVAAVLFVGLAFGALDPSLKLPEIVYQFGLALFVYCVGLSSGHGFLR
SFRGKGVIYNLLTLGVILLAAALLLIPHYLLSLRPGETAGVFAGLLTSTPALAAAVEYLTRAGAAGQLSDPVVGYSIAYP
ASVLGVILAIYLAERCFRIDYRAEARTLKDVPGVSPEITCWTLRVCRPKAFGRTVRDLVAEHRLQVVFGRIRRGDHADVV
SWETHLEEGDLVTAVGPVEELERAAQVIGCVSEVQADLDRSEVDMREVFVSNPEVAGRTLRELNLPNRFGAVVSRVWRGD
LQLLPYADMPLELGDRVRVLSRRERQQEVAAYLGDSYRAISEIDIAVLGLGMALGIGLGLVPIPLPGGITVRLGLAGGPL
IVALFLGARQRTGSLVWVLPYSANMLLRQMGLTIFLAAVGTRSGYEFAQMLTQPRGWAILGASAAIIVLLSWVMLYVGYR
WLRIPMGLLTGMVAGMQTQSATLGFALDQAGNDLPTVGYAMVYPMAMVVKIVLAPVIIAVLT

Specific function: Unknown

COG id: COG2985

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 RCK C-terminal domains

Homologues:

Organism=Escherichia coli, GI87082315, Length=548, Percent_Identity=31.7518248175182, Blast_Score=232, Evalue=5e-62,
Organism=Escherichia coli, GI1787071, Length=567, Percent_Identity=25.5731922398589, Blast_Score=135, Evalue=5e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2172_SYMTH (Q67MD6)

Other databases:

- EMBL:   AP006840
- RefSeq:   YP_076001.1
- ProteinModelPortal:   Q67MD6
- GeneID:   2980866
- GenomeReviews:   AP006840_GR
- KEGG:   sth:STH2172
- NMPDR:   fig|292459.1.peg.2094
- HOGENOM:   HBG452396
- OMA:   YGIAYPF
- ProtClustDB:   CLSK924462
- BioCyc:   STHE292459:STH2172-MONOMER
- InterPro:   IPR006037
- InterPro:   IPR006512
- TIGRFAMs:   TIGR01625

Pfam domain/function: PF06826 Asp-Al_Ex; PF02080 TrkA_C

EC number: NA

Molecular weight: Translated: 58367; Mature: 58367

Theoretical pI: Translated: 8.42; Mature: 8.42

Prosite motif: PS51202 RCK_C

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1209a2d4)-; HASH(0x141b2310)-; HASH(0x14367988)-; HASH(0x14363b10)-; HASH(0x10139bec)-; HASH(0xd29abac)-; HASH(0x143bd3b8)-; HASH(0x10e3bfec)-; HASH(0x13dbcc68)-; HASH(0x14002564)-; HASH(0x143679dc)-;

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDILRDNPLLLLFIVAGIGYPLGRVRIGGIHLGVAAVLFVGLAFGALDPSLKLPEIVYQ
CCCCCCCCCHHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
FGLALFVYCVGLSSGHGFLRSFRGKGVIYNLLTLGVILLAAALLLIPHYLLSLRPGETAG
HHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
VFAGLLTSTPALAAAVEYLTRAGAAGQLSDPVVGYSIAYPASVLGVILAIYLAERCFRID
HHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCC
YRAEARTLKDVPGVSPEITCWTLRVCRPKAFGRTVRDLVAEHRLQVVFGRIRRGDHADVV
CHHHHHHHHHCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE
SWETHLEEGDLVTAVGPVEELERAAQVIGCVSEVQADLDRSEVDMREVFVSNPEVAGRTL
EHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHH
RELNLPNRFGAVVSRVWRGDLQLLPYADMPLELGDRVRVLSRRERQQEVAAYLGDSYRAI
HHCCCCHHHHHHHHHHHCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHH
SEIDIAVLGLGMALGIGLGLVPIPLPGGITVRLGLAGGPLIVALFLGARQRTGSLVWVLP
HHHHHHHHHHHHHHHHCCCCEEECCCCCCEEEEECCCCHHHHHHHHCCCCCCCCEEEEEC
YSANMLLRQMGLTIFLAAVGTRSGYEFAQMLTQPRGWAILGASAAIIVLLSWVMLYVGYR
CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHHHCHH
WLRIPMGLLTGMVAGMQTQSATLGFALDQAGNDLPTVGYAMVYPMAMVVKIVLAPVIIAV
HHHHHHHHHHHHHHCCCCCCCHHEEEHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LT
CH
>Mature Secondary Structure
MLDILRDNPLLLLFIVAGIGYPLGRVRIGGIHLGVAAVLFVGLAFGALDPSLKLPEIVYQ
CCCCCCCCCHHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
FGLALFVYCVGLSSGHGFLRSFRGKGVIYNLLTLGVILLAAALLLIPHYLLSLRPGETAG
HHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
VFAGLLTSTPALAAAVEYLTRAGAAGQLSDPVVGYSIAYPASVLGVILAIYLAERCFRID
HHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCC
YRAEARTLKDVPGVSPEITCWTLRVCRPKAFGRTVRDLVAEHRLQVVFGRIRRGDHADVV
CHHHHHHHHHCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE
SWETHLEEGDLVTAVGPVEELERAAQVIGCVSEVQADLDRSEVDMREVFVSNPEVAGRTL
EHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHH
RELNLPNRFGAVVSRVWRGDLQLLPYADMPLELGDRVRVLSRRERQQEVAAYLGDSYRAI
HHCCCCHHHHHHHHHHHCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHH
SEIDIAVLGLGMALGIGLGLVPIPLPGGITVRLGLAGGPLIVALFLGARQRTGSLVWVLP
HHHHHHHHHHHHHHHHCCCCEEECCCCCCEEEEECCCCHHHHHHHHCCCCCCCCEEEEEC
YSANMLLRQMGLTIFLAAVGTRSGYEFAQMLTQPRGWAILGASAAIIVLLSWVMLYVGYR
CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHHHCHH
WLRIPMGLLTGMVAGMQTQSATLGFALDQAGNDLPTVGYAMVYPMAMVVKIVLAPVIIAV
HHHHHHHHHHHHHHCCCCCCCHHEEEHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LT
CH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA