| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51893266
Identifier: 51893266
GI number: 51893266
Start: 2275034
End: 2275513
Strand: Reverse
Name: 51893266
Synonym: STH2128
Alternate gene names: NA
Gene position: 2275513-2275034 (Counterclockwise)
Preceding gene: 51893268
Following gene: 51893263
Centisome position: 63.81
GC content: 73.12
Gene sequence:
>480_bases ATGGCGGCGATCGCGGGGGTGCCCCGGCTGCCGGATGGCCTGTCGCCTCCGGCCGACAGGCCGGCGGTGGATCAGGCGGA GGCGGACAGGGTGACGCTCGACGTGAACGAGCTCATCGCACGCGCGGCCGGCGAAGGCCCGGTGCACGAGGCGCCGGCCG GGGGAGCGGGCACTGTCCGTGTCTGCATCCGGGAGGAAGCGGACGGAAGGCGCAAAGCGGTGGTCGACCTGACCGAGGCG CCCTGGGTGGTTCCCGCCGTGGACCCGTACGCCCTGACTGAACTGGGGCTGGATTCCGTGGTGGAGTTCATCCTGTGGAA GGCGGAGGGAGCAAGCGGCAGGCTGGGTCGCCCGGCGCCTCCGCCCCGCCCGGGTGGGGTTGCAGGGTCAGCGGCAAGCC GTCATCCGCGGGGCTGGGCCTATCCTTCGGCGGGTGGGCTGCCACCCTCCGGTTCGTCGGGTTCACCCTGCGCAGGGTGA
Upstream 100 bases:
>100_bases TCTGCCGGAACGATAGAACAGACGCACTTGCCGTACCAAATGCAAGGGAGAGGTGGGTGGCGTGCGGAAGCGGTGGCTCG GGGTGGGGCTGCTCGTCGCC
Downstream 100 bases:
>100_bases CCGTCGTCCCGCTCCGGTGCGTCAGGTTCACCCTCGGCGGGGCGGCCACCGTTCCCCGGGTCCGCGGGTCCGCCCCCGAC AGGTTCACCGTCCTCGCCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 159; Mature: 158
Protein sequence:
>159_residues MAAIAGVPRLPDGLSPPADRPAVDQAEADRVTLDVNELIARAAGEGPVHEAPAGGAGTVRVCIREEADGRRKAVVDLTEA PWVVPAVDPYALTELGLDSVVEFILWKAEGASGRLGRPAPPPRPGGVAGSAASRHPRGWAYPSAGGLPPSGSSGSPCAG
Sequences:
>Translated_159_residues MAAIAGVPRLPDGLSPPADRPAVDQAEADRVTLDVNELIARAAGEGPVHEAPAGGAGTVRVCIREEADGRRKAVVDLTEA PWVVPAVDPYALTELGLDSVVEFILWKAEGASGRLGRPAPPPRPGGVAGSAASRHPRGWAYPSAGGLPPSGSSGSPCAG >Mature_158_residues AAIAGVPRLPDGLSPPADRPAVDQAEADRVTLDVNELIARAAGEGPVHEAPAGGAGTVRVCIREEADGRRKAVVDLTEAP WVVPAVDPYALTELGLDSVVEFILWKAEGASGRLGRPAPPPRPGGVAGSAASRHPRGWAYPSAGGLPPSGSSGSPCAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16037; Mature: 15906
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAIAGVPRLPDGLSPPADRPAVDQAEADRVTLDVNELIARAAGEGPVHEAPAGGAGTVR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHCCCCCCCCCCCCCCCEEE VCIREEADGRRKAVVDLTEAPWVVPAVDPYALTELGLDSVVEFILWKAEGASGRLGRPAP EEEECCCCCCCEEEEEECCCCEEEECCCCHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCC PPRPGGVAGSAASRHPRGWAYPSAGGLPPSGSSGSPCAG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AAIAGVPRLPDGLSPPADRPAVDQAEADRVTLDVNELIARAAGEGPVHEAPAGGAGTVR CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHCCCCCCCCCCCCCCCEEE VCIREEADGRRKAVVDLTEAPWVVPAVDPYALTELGLDSVVEFILWKAEGASGRLGRPAP EEEECCCCCCCEEEEEECCCCEEEECCCCHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCC PPRPGGVAGSAASRHPRGWAYPSAGGLPPSGSSGSPCAG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA