Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51893266

Identifier: 51893266

GI number: 51893266

Start: 2275034

End: 2275513

Strand: Reverse

Name: 51893266

Synonym: STH2128

Alternate gene names: NA

Gene position: 2275513-2275034 (Counterclockwise)

Preceding gene: 51893268

Following gene: 51893263

Centisome position: 63.81

GC content: 73.12

Gene sequence:

>480_bases
ATGGCGGCGATCGCGGGGGTGCCCCGGCTGCCGGATGGCCTGTCGCCTCCGGCCGACAGGCCGGCGGTGGATCAGGCGGA
GGCGGACAGGGTGACGCTCGACGTGAACGAGCTCATCGCACGCGCGGCCGGCGAAGGCCCGGTGCACGAGGCGCCGGCCG
GGGGAGCGGGCACTGTCCGTGTCTGCATCCGGGAGGAAGCGGACGGAAGGCGCAAAGCGGTGGTCGACCTGACCGAGGCG
CCCTGGGTGGTTCCCGCCGTGGACCCGTACGCCCTGACTGAACTGGGGCTGGATTCCGTGGTGGAGTTCATCCTGTGGAA
GGCGGAGGGAGCAAGCGGCAGGCTGGGTCGCCCGGCGCCTCCGCCCCGCCCGGGTGGGGTTGCAGGGTCAGCGGCAAGCC
GTCATCCGCGGGGCTGGGCCTATCCTTCGGCGGGTGGGCTGCCACCCTCCGGTTCGTCGGGTTCACCCTGCGCAGGGTGA

Upstream 100 bases:

>100_bases
TCTGCCGGAACGATAGAACAGACGCACTTGCCGTACCAAATGCAAGGGAGAGGTGGGTGGCGTGCGGAAGCGGTGGCTCG
GGGTGGGGCTGCTCGTCGCC

Downstream 100 bases:

>100_bases
CCGTCGTCCCGCTCCGGTGCGTCAGGTTCACCCTCGGCGGGGCGGCCACCGTTCCCCGGGTCCGCGGGTCCGCCCCCGAC
AGGTTCACCGTCCTCGCCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 158

Protein sequence:

>159_residues
MAAIAGVPRLPDGLSPPADRPAVDQAEADRVTLDVNELIARAAGEGPVHEAPAGGAGTVRVCIREEADGRRKAVVDLTEA
PWVVPAVDPYALTELGLDSVVEFILWKAEGASGRLGRPAPPPRPGGVAGSAASRHPRGWAYPSAGGLPPSGSSGSPCAG

Sequences:

>Translated_159_residues
MAAIAGVPRLPDGLSPPADRPAVDQAEADRVTLDVNELIARAAGEGPVHEAPAGGAGTVRVCIREEADGRRKAVVDLTEA
PWVVPAVDPYALTELGLDSVVEFILWKAEGASGRLGRPAPPPRPGGVAGSAASRHPRGWAYPSAGGLPPSGSSGSPCAG
>Mature_158_residues
AAIAGVPRLPDGLSPPADRPAVDQAEADRVTLDVNELIARAAGEGPVHEAPAGGAGTVRVCIREEADGRRKAVVDLTEAP
WVVPAVDPYALTELGLDSVVEFILWKAEGASGRLGRPAPPPRPGGVAGSAASRHPRGWAYPSAGGLPPSGSSGSPCAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16037; Mature: 15906

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAIAGVPRLPDGLSPPADRPAVDQAEADRVTLDVNELIARAAGEGPVHEAPAGGAGTVR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHCCCCCCCCCCCCCCCEEE
VCIREEADGRRKAVVDLTEAPWVVPAVDPYALTELGLDSVVEFILWKAEGASGRLGRPAP
EEEECCCCCCCEEEEEECCCCEEEECCCCHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCC
PPRPGGVAGSAASRHPRGWAYPSAGGLPPSGSSGSPCAG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AAIAGVPRLPDGLSPPADRPAVDQAEADRVTLDVNELIARAAGEGPVHEAPAGGAGTVR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHCCCCCCCCCCCCCCCEEE
VCIREEADGRRKAVVDLTEAPWVVPAVDPYALTELGLDSVVEFILWKAEGASGRLGRPAP
EEEECCCCCCCEEEEEECCCCEEEECCCCHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCC
PPRPGGVAGSAASRHPRGWAYPSAGGLPPSGSSGSPCAG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA