| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is mdtG [H]
Identifier: 51893150
GI number: 51893150
Start: 2152847
End: 2154079
Strand: Reverse
Name: mdtG [H]
Synonym: STH2012
Alternate gene names: 51893150
Gene position: 2154079-2152847 (Counterclockwise)
Preceding gene: 51893153
Following gene: 51893147
Centisome position: 60.4
GC content: 70.64
Gene sequence:
>1233_bases ATGACGGAAAGAAGGCGCCATAACGAGATGGAACCCTGGCGGAGAAACGTGGCGGTCCTCTGGATCGCGGTCTTCATCGC AGCATCCGCATGGACAATGGTCATGCCGTTCATGCCGGTTTTTCTGAGCGAGGACCTGGGTGTGGGGGCTGGTGTCACGG TGTGGGCCGGCCTGCTGGGCGCGGTCAACTCGGGCTTCTCGGCGCTCACCGCCCCGATCTGGGGCGCCCTGGGCGACCGC TGGGGCCGCAAGGCGATGATGGTGCGCGCCGGCATCTTCCTGGGTTCCGCCTACGTGCTGATGGCCTTCGTCCGCAACCC CTACGAGCTGCTGGGCGTCCGGGTCATGATCGGCGCCCTGACCGGGTTCATCCCGACCGCGACGGCGCTGGTGGCCACGA CCACCCCGGAGCGCCACATGGGACAGGCCCTGTCGCTGGTGGCCACCGGCAATCAGGCGGGGTCGATCCTGGGGCCGATG CTGGGCGGCTTCCTGGCCGACCTGATCGGCATCCGCAATACCATGGCCCTGAGCGGCGTCGCCGTGTTCGCCGCGACGCT GCTGGTGGTGTTCGCGGTCCGGGAGCAGTTCCAGCGGCCGGCGCGGCAGCCGGCGCACTTCCTGAGCGACATGCGGCAGG TGCTGCAGGGCGGGCCGTTGATCGTGGTGCTGGCCATGTCCCTGCTCCTGCAGATGTCCCAGTCGGCGATGGAGCCGGTG CTGATCCCCCATATCCGCCAGCTCCTGGGCTCCGGCAGCCCCAACTGGATGGCCGGCGTGATCTACTCCGTGCCGGGCAT CGCCTTCGTGCTGGCCGCCCCGTCGTGGGCGAGGCTCGGCGAGCGCTGGGGCTACACCACCACGGTGACCATCGGCCTGG CGGGCGGCGCGCTGTTCACACTGCCGCAGGCCCTGGTGCAGAGCGGTCTGGGCATGGGGAGCTTCCGCCTGAGTGCCGGC CTCGCGCTCGCCGCCGTCACCCCCGGCATCTCCGCCCTGATCGCCGCATCGGTCCCGCGGGAGCAGCGGGGCAAGGCCTT TGGGCTCAACCAGTCCGCGTTCAACGTCGGGGCCATGCTGGGTCCGCTCCTGGGCGGCGTGCTGGGCGACCGGGTCGGGA TCCGGTGGGTCTTCCCGGCCACGGCGCTGCTGCTCCTGTTCGCCGCGGGCTGGTGCTGGTCCCTGGTGCGGGCGCGCGTC CGGCAGCACCGGGATTCGCAGCTCACCGCCTGA
Upstream 100 bases:
>100_bases TACATGCCGGTTTCCCTGCTGGAGCCGACGGGATTTTGCAGTGACCCGTAGACAACGGCGGGATTCCGGCCTATAGTCAT TTCGTCAACGCGAGTTCAGT
Downstream 100 bases:
>100_bases CCGCCCCGCGCCGGCGCTCAGGGCCCGCCTCAGGCTTCGGCCTGCTCCCGCGCCGCCTGCTCGGCGGCTTCCCGCTCCCG CCGGCGCCGCCGGTGGGCTG
Product: putative multidrug efflux protein
Products: Proton [Cytoplasm]; drug [Periplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 410; Mature: 409
Protein sequence:
>410_residues MTERRRHNEMEPWRRNVAVLWIAVFIAASAWTMVMPFMPVFLSEDLGVGAGVTVWAGLLGAVNSGFSALTAPIWGALGDR WGRKAMMVRAGIFLGSAYVLMAFVRNPYELLGVRVMIGALTGFIPTATALVATTTPERHMGQALSLVATGNQAGSILGPM LGGFLADLIGIRNTMALSGVAVFAATLLVVFAVREQFQRPARQPAHFLSDMRQVLQGGPLIVVLAMSLLLQMSQSAMEPV LIPHIRQLLGSGSPNWMAGVIYSVPGIAFVLAAPSWARLGERWGYTTTVTIGLAGGALFTLPQALVQSGLGMGSFRLSAG LALAAVTPGISALIAASVPREQRGKAFGLNQSAFNVGAMLGPLLGGVLGDRVGIRWVFPATALLLLFAAGWCWSLVRARV RQHRDSQLTA
Sequences:
>Translated_410_residues MTERRRHNEMEPWRRNVAVLWIAVFIAASAWTMVMPFMPVFLSEDLGVGAGVTVWAGLLGAVNSGFSALTAPIWGALGDR WGRKAMMVRAGIFLGSAYVLMAFVRNPYELLGVRVMIGALTGFIPTATALVATTTPERHMGQALSLVATGNQAGSILGPM LGGFLADLIGIRNTMALSGVAVFAATLLVVFAVREQFQRPARQPAHFLSDMRQVLQGGPLIVVLAMSLLLQMSQSAMEPV LIPHIRQLLGSGSPNWMAGVIYSVPGIAFVLAAPSWARLGERWGYTTTVTIGLAGGALFTLPQALVQSGLGMGSFRLSAG LALAAVTPGISALIAASVPREQRGKAFGLNQSAFNVGAMLGPLLGGVLGDRVGIRWVFPATALLLLFAAGWCWSLVRARV RQHRDSQLTA >Mature_409_residues TERRRHNEMEPWRRNVAVLWIAVFIAASAWTMVMPFMPVFLSEDLGVGAGVTVWAGLLGAVNSGFSALTAPIWGALGDRW GRKAMMVRAGIFLGSAYVLMAFVRNPYELLGVRVMIGALTGFIPTATALVATTTPERHMGQALSLVATGNQAGSILGPML GGFLADLIGIRNTMALSGVAVFAATLLVVFAVREQFQRPARQPAHFLSDMRQVLQGGPLIVVLAMSLLLQMSQSAMEPVL IPHIRQLLGSGSPNWMAGVIYSVPGIAFVLAAPSWARLGERWGYTTTVTIGLAGGALFTLPQALVQSGLGMGSFRLSAGL ALAAVTPGISALIAASVPREQRGKAFGLNQSAFNVGAMLGPLLGGVLGDRVGIRWVFPATALLLLFAAGWCWSLVRARVR QHRDSQLTA
Specific function: Confers resistance to fosfomycin and deoxycholate [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. DHA1 family. MdtG (TC 2.A.1.2.20) subfamily [H]
Homologues:
Organism=Escherichia coli, GI1787291, Length=398, Percent_Identity=33.9195979899498, Blast_Score=225, Evalue=4e-60, Organism=Drosophila melanogaster, GI62471713, Length=349, Percent_Identity=24.0687679083095, Blast_Score=65, Evalue=6e-11, Organism=Drosophila melanogaster, GI62471717, Length=349, Percent_Identity=24.0687679083095, Blast_Score=65, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR001958 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 43501; Mature: 43370
Theoretical pI: Translated: 11.95; Mature: 11.95
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTERRRHNEMEPWRRNVAVLWIAVFIAASAWTMVMPFMPVFLSEDLGVGAGVTVWAGLLG CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH AVNSGFSALTAPIWGALGDRWGRKAMMVRAGIFLGSAYVLMAFVRNPYELLGVRVMIGAL HHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH TGFIPTATALVATTTPERHMGQALSLVATGNQAGSILGPMLGGFLADLIGIRNTMALSGV HHHHHHHHHHHEECCCHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AVFAATLLVVFAVREQFQRPARQPAHFLSDMRQVLQGGPLIVVLAMSLLLQMSQSAMEPV HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCH LIPHIRQLLGSGSPNWMAGVIYSVPGIAFVLAAPSWARLGERWGYTTTVTIGLAGGALFT HHHHHHHHHCCCCCCHHHHHHHHHCHHHHHHCCCCHHHHHHHCCCEEEEEEEECCCHHHH LPQALVQSGLGMGSFRLSAGLALAAVTPGISALIAASVPREQRGKAFGLNQSAFNVGAML HHHHHHHCCCCCCCHHHHHCCHHHHHCCCHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHH GPLLGGVLGDRVGIRWVFPATALLLLFAAGWCWSLVRARVRQHRDSQLTA HHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure TERRRHNEMEPWRRNVAVLWIAVFIAASAWTMVMPFMPVFLSEDLGVGAGVTVWAGLLG CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH AVNSGFSALTAPIWGALGDRWGRKAMMVRAGIFLGSAYVLMAFVRNPYELLGVRVMIGAL HHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH TGFIPTATALVATTTPERHMGQALSLVATGNQAGSILGPMLGGFLADLIGIRNTMALSGV HHHHHHHHHHHEECCCHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AVFAATLLVVFAVREQFQRPARQPAHFLSDMRQVLQGGPLIVVLAMSLLLQMSQSAMEPV HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCH LIPHIRQLLGSGSPNWMAGVIYSVPGIAFVLAAPSWARLGERWGYTTTVTIGLAGGALFT HHHHHHHHHCCCCCCHHHHHHHHHCHHHHHHCCCCHHHHHHHCCCEEEEEEEECCCHHHH LPQALVQSGLGMGSFRLSAGLALAAVTPGISALIAASVPREQRGKAFGLNQSAFNVGAML HHHHHHHCCCCCCCHHHHHCCHHHHHCCCHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHH GPLLGGVLGDRVGIRWVFPATALLLLFAAGWCWSLVRARVRQHRDSQLTA HHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; drug [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + drug [Cytoplasm] = Proton [Cytoplasm] + drug [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA