Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51893104

Identifier: 51893104

GI number: 51893104

Start: 2103912

End: 2104535

Strand: Reverse

Name: 51893104

Synonym: STH1966

Alternate gene names: NA

Gene position: 2104535-2103912 (Counterclockwise)

Preceding gene: 51893105

Following gene: 51893103

Centisome position: 59.01

GC content: 66.83

Gene sequence:

>624_bases
ATGGTGAAATGGATCGCAGGACTGGTCGCGCTGGCGGTCGCGGTGGGCGCGGCCATTTGGGTCGGGTACAGCCGCGGGCA
CGGCGGCCTGCCCGCGGTCTTCGGTTCCCTGGAGCGGTCGGTGGCGATCAGGGCTGACTATCAGGTCTACACCACCCTGG
AAGAACTGGTGGAGGAGGCGTCGGTGATCGCAGTGGGGATGGTGGAAGGGGTGGAGGGCACCCGCAACCTGGCCCGGGAC
CCGGACAACCCGGATCTGCCGCACCCCAGCCTGGAGATCATCGGATACGACTACCGATTTGTGGTGGAGGAGTACCTGAA
AGGCGATGGTCCCGACACGATCCTGGTGACCGAGGCCAGGAAGTTCCTGTCCCACGGTCGGGAAGGGATTCCGGCTGAGC
CGCCCGCTCCGGAGATGGAATCCGGCGGCCGGTACATCCTCTTCCTGAACAGGGCGGCCGACGCGGAAGGGCGCTGGATC
GGGGTCGCGGAGCCGTGGCGGTTTGCCCTGAGGGACGCGGAGGTTCAGGTCGAAAGCATGTGGGAGGCTGCACCGAGGGC
GTTTCCCTCGGTGGGGGAAGGGGAGTTCGTGGACCAGATCCGCACCCTGGTCAGCGCCCTGTGA

Upstream 100 bases:

>100_bases
GGCGATCCGTCAGAATTGGCGGAAACACGGGTCGCAGGACCCGAGGCCGGGTGAGCGAGGGGGCCGGCCACCAGTGGCGG
GGGGGGGGGGAAGGTGCGAG

Downstream 100 bases:

>100_bases
CCCGGCCGTGGCCGACCCCCGGTGCGGTGGCCCTTCGCCCCGTATGGGGACGTCACCCGCGTACCGGGTCGCGGCGGTCT
GGCGGTCCCGCATCGGGACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MVKWIAGLVALAVAVGAAIWVGYSRGHGGLPAVFGSLERSVAIRADYQVYTTLEELVEEASVIAVGMVEGVEGTRNLARD
PDNPDLPHPSLEIIGYDYRFVVEEYLKGDGPDTILVTEARKFLSHGREGIPAEPPAPEMESGGRYILFLNRAADAEGRWI
GVAEPWRFALRDAEVQVESMWEAAPRAFPSVGEGEFVDQIRTLVSAL

Sequences:

>Translated_207_residues
MVKWIAGLVALAVAVGAAIWVGYSRGHGGLPAVFGSLERSVAIRADYQVYTTLEELVEEASVIAVGMVEGVEGTRNLARD
PDNPDLPHPSLEIIGYDYRFVVEEYLKGDGPDTILVTEARKFLSHGREGIPAEPPAPEMESGGRYILFLNRAADAEGRWI
GVAEPWRFALRDAEVQVESMWEAAPRAFPSVGEGEFVDQIRTLVSAL
>Mature_207_residues
MVKWIAGLVALAVAVGAAIWVGYSRGHGGLPAVFGSLERSVAIRADYQVYTTLEELVEEASVIAVGMVEGVEGTRNLARD
PDNPDLPHPSLEIIGYDYRFVVEEYLKGDGPDTILVTEARKFLSHGREGIPAEPPAPEMESGGRYILFLNRAADAEGRWI
GVAEPWRFALRDAEVQVESMWEAAPRAFPSVGEGEFVDQIRTLVSAL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22568; Mature: 22568

Theoretical pI: Translated: 4.33; Mature: 4.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKWIAGLVALAVAVGAAIWVGYSRGHGGLPAVFGSLERSVAIRADYQVYTTLEELVEEA
CHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHCEEEECCHHHHHHHHHHHHHH
SVIAVGMVEGVEGTRNLARDPDNPDLPHPSLEIIGYDYRFVVEEYLKGDGPDTILVTEAR
HEEEEHHHHCCCHHHHHCCCCCCCCCCCCCEEEEECHHHHHHHHHHCCCCCCEEEEHHHH
KFLSHGREGIPAEPPAPEMESGGRYILFLNRAADAEGRWIGVAEPWRFALRDAEVQVESM
HHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEECCCHHHHHHHHHHHHHHHH
WEAAPRAFPSVGEGEFVDQIRTLVSAL
HHHHHHCCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MVKWIAGLVALAVAVGAAIWVGYSRGHGGLPAVFGSLERSVAIRADYQVYTTLEELVEEA
CHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHCEEEECCHHHHHHHHHHHHHH
SVIAVGMVEGVEGTRNLARDPDNPDLPHPSLEIIGYDYRFVVEEYLKGDGPDTILVTEAR
HEEEEHHHHCCCHHHHHCCCCCCCCCCCCCEEEEECHHHHHHHHHHCCCCCCEEEEHHHH
KFLSHGREGIPAEPPAPEMESGGRYILFLNRAADAEGRWIGVAEPWRFALRDAEVQVESM
HHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEECCCHHHHHHHHHHHHHHHH
WEAAPRAFPSVGEGEFVDQIRTLVSAL
HHHHHHCCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA