Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51893092

Identifier: 51893092

GI number: 51893092

Start: 2094365

End: 2095429

Strand: Reverse

Name: 51893092

Synonym: STH1954

Alternate gene names: NA

Gene position: 2095429-2094365 (Counterclockwise)

Preceding gene: 51893093

Following gene: 51893091

Centisome position: 58.76

GC content: 74.27

Gene sequence:

>1065_bases
GTGGACGTGACGGCGGCCTTTGACCCGCTGAACCCCTCGGTCGAGGCCATCAGCCTGCGCCAGCGGGTGAACTTCCTGGC
CACGGCCGCGGATCACGCCTATGGCCGCCTGCTGGAGCTGTTCCCGGAAGCGGCCTCGGCCGGGCGTCCGCAGATCCGGC
TCTACGAGAGCCACGAGGCCTTCCGCGCCGCGGTGGGCGCCGCGGCCCCGCCGGATGCGCTGGCCTGGTACAATCCGGGC
GATCCGCTGCGGCTGTCGCCGGAGTTTCTGCGGGGGCTCATGCGCTGGGAGACGGAGCGCGACCTGGGCTATGAGTTCGT
CAAGCACATCTCCGCCGCCGCGTCCGGGCAGCCGGTGGCCCTGATCGATCCGATCGCCATGGGGCTCTTCGAGCGGAGTA
CCGCAGGGGACCTGCCCTACCTCCCCGACCCCCGGAGGCTGGTCGGAACGCCGCTGCCCGACCTGGCGGCGCTCTTCAGC
ACCCCGGTCCAGTCCCTGGGGGCGGCCGGGCAGCGGGCCTACGCCACGGCCGCTGCGGAACTGGTCCGCTTCCTGCAGGA
CCGGCTTCCTGCGGAGGAGCTGCAGGGCCCGGCGCCCGGCCGGGGCTGGAGCCTGGGTGCGCTGGCGGATCGGCTGGGAC
AGACGCCGGAAACGCTCGCCGCCGAGTTCGAGGTCTTCCTGCACCGGCAGCTGCAGGCCACGTCGGTGCTGAACGTTCCG
GCCGCGCAGTCCCGGGTGCCCGAGGGCCTGCCGGATGCCATCGCCCGGCGGGCGGAGGCCGCGGCCGGCGGGGACGTGGA
GGCATTCCTCCGCCGGACCTCCCCCGCGCACCGGGACGGGTGGTCGGCGTGGCTGGCCGCCGCCCGCCGGTACGGGCTGG
TGCGGTACGAGGCGTCGCTGCTGGACTGGGAGCGCAACGAGGGCGTCGCGCTGGTTCTGGAGCGGCTGCAGTTCCGCGAT
GGCCGCACCGTCATCGGGGTCGTGCGGCAGCATTGGGCCCTGGAGGACGCCGGTTGGGCGGCAGGGCCGGTGGAATCGGT
GTGGACCGGCGCGGACGGGCCCTGA

Upstream 100 bases:

>100_bases
CAGCCCTCCGCTGCACCTCAGCCGGCCTGTGGACCTGGTGCGCCGCCTGGGCACGTGGTACGTGGAGGACCGGGAGCTCT
ACACCCTGCGCGGGTAACAC

Downstream 100 bases:

>100_bases
CCGGGCGCGGGCTCTGCTGCGCTGCGGCCGCCGCGGTGACGGGGTGAGGGGATCGCCCCTACCTGGGGGTTTCCCCATGG
TCACACCTGTGGTAGAATGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 354; Mature: 354

Protein sequence:

>354_residues
MDVTAAFDPLNPSVEAISLRQRVNFLATAADHAYGRLLELFPEAASAGRPQIRLYESHEAFRAAVGAAAPPDALAWYNPG
DPLRLSPEFLRGLMRWETERDLGYEFVKHISAAASGQPVALIDPIAMGLFERSTAGDLPYLPDPRRLVGTPLPDLAALFS
TPVQSLGAAGQRAYATAAAELVRFLQDRLPAEELQGPAPGRGWSLGALADRLGQTPETLAAEFEVFLHRQLQATSVLNVP
AAQSRVPEGLPDAIARRAEAAAGGDVEAFLRRTSPAHRDGWSAWLAAARRYGLVRYEASLLDWERNEGVALVLERLQFRD
GRTVIGVVRQHWALEDAGWAAGPVESVWTGADGP

Sequences:

>Translated_354_residues
MDVTAAFDPLNPSVEAISLRQRVNFLATAADHAYGRLLELFPEAASAGRPQIRLYESHEAFRAAVGAAAPPDALAWYNPG
DPLRLSPEFLRGLMRWETERDLGYEFVKHISAAASGQPVALIDPIAMGLFERSTAGDLPYLPDPRRLVGTPLPDLAALFS
TPVQSLGAAGQRAYATAAAELVRFLQDRLPAEELQGPAPGRGWSLGALADRLGQTPETLAAEFEVFLHRQLQATSVLNVP
AAQSRVPEGLPDAIARRAEAAAGGDVEAFLRRTSPAHRDGWSAWLAAARRYGLVRYEASLLDWERNEGVALVLERLQFRD
GRTVIGVVRQHWALEDAGWAAGPVESVWTGADGP
>Mature_354_residues
MDVTAAFDPLNPSVEAISLRQRVNFLATAADHAYGRLLELFPEAASAGRPQIRLYESHEAFRAAVGAAAPPDALAWYNPG
DPLRLSPEFLRGLMRWETERDLGYEFVKHISAAASGQPVALIDPIAMGLFERSTAGDLPYLPDPRRLVGTPLPDLAALFS
TPVQSLGAAGQRAYATAAAELVRFLQDRLPAEELQGPAPGRGWSLGALADRLGQTPETLAAEFEVFLHRQLQATSVLNVP
AAQSRVPEGLPDAIARRAEAAAGGDVEAFLRRTSPAHRDGWSAWLAAARRYGLVRYEASLLDWERNEGVALVLERLQFRD
GRTVIGVVRQHWALEDAGWAAGPVESVWTGADGP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38309; Mature: 38309

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVTAAFDPLNPSVEAISLRQRVNFLATAADHAYGRLLELFPEAASAGRPQIRLYESHEA
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHH
FRAAVGAAAPPDALAWYNPGDPLRLSPEFLRGLMRWETERDLGYEFVKHISAAASGQPVA
HHHHHCCCCCCCCEECCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
LIDPIAMGLFERSTAGDLPYLPDPRRLVGTPLPDLAALFSTPVQSLGAAGQRAYATAAAE
EECHHHHHHHHCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH
LVRFLQDRLPAEELQGPAPGRGWSLGALADRLGQTPETLAAEFEVFLHRQLQATSVLNVP
HHHHHHHCCCHHHHCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCC
AAQSRVPEGLPDAIARRAEAAAGGDVEAFLRRTSPAHRDGWSAWLAAARRYGLVRYEASL
CHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHCHHEEHHHH
LDWERNEGVALVLERLQFRDGRTVIGVVRQHWALEDAGWAAGPVESVWTGADGP
HCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCC
>Mature Secondary Structure
MDVTAAFDPLNPSVEAISLRQRVNFLATAADHAYGRLLELFPEAASAGRPQIRLYESHEA
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHH
FRAAVGAAAPPDALAWYNPGDPLRLSPEFLRGLMRWETERDLGYEFVKHISAAASGQPVA
HHHHHCCCCCCCCEECCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
LIDPIAMGLFERSTAGDLPYLPDPRRLVGTPLPDLAALFSTPVQSLGAAGQRAYATAAAE
EECHHHHHHHHCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH
LVRFLQDRLPAEELQGPAPGRGWSLGALADRLGQTPETLAAEFEVFLHRQLQATSVLNVP
HHHHHHHCCCHHHHCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCC
AAQSRVPEGLPDAIARRAEAAAGGDVEAFLRRTSPAHRDGWSAWLAAARRYGLVRYEASL
CHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHCHHEEHHHH
LDWERNEGVALVLERLQFRDGRTVIGVVRQHWALEDAGWAAGPVESVWTGADGP
HCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA