Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51893024

Identifier: 51893024

GI number: 51893024

Start: 2029364

End: 2029747

Strand: Reverse

Name: 51893024

Synonym: STH1886

Alternate gene names: NA

Gene position: 2029747-2029364 (Counterclockwise)

Preceding gene: 51893025

Following gene: 51893023

Centisome position: 56.92

GC content: 70.57

Gene sequence:

>384_bases
TTGCGCGGGAGCGCCGGGGCAGAGGGGGGACACGCGCAAAATCTGCACCCGGGCTCGGGGAGGCGGTTCAGGTTTTGCGC
GGGAGCGCCGGGGCAGAGGGGGGGACACGCGCAAAATCTGCACCCGGGCTCGGGGAGGCGGTTCAGGTTTTGCGCGGGAG
CGCCGGGGCAGAAGGGGGGACACGCGCAAAATTTGCACCCGGGCTCGGGGAGGCGGTTCAGGTTTTGCGCGGGAGCGCCG
GGGCAGAAGGGGAGGCACGCGCAAAATCTGCACCCGGGCTCGGGTGGGCGGTTCAGGTTTTGCGCGGGAGCGCCGGGGCA
GAAGGGGAGGCACGCGCAGAATCTGCACCCGGACTCGGGGAGGCGGTTCAGGTTTTGCGCGTGA

Upstream 100 bases:

>100_bases
CGGGCTCGGGGAGGCGGTTCAGGTTTTGCGCGGGAGCGCCGGGGCAGAGGGGGGGACACGCGCAGAATCTGCACCCGGGT
TCGGGTGGGCGGTTCAGGTT

Downstream 100 bases:

>100_bases
CGGTGGGAACACAGGGGATCCGCGCACCAGGTCATCCGGGGGAGTCCCGGGGCACGGACCCTGCGGCCGGGGAATACGAC
TTTGAAGGGAGGCGCCGCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MRGSAGAEGGHAQNLHPGSGRRFRFCAGAPGQRGGHAQNLHPGSGRRFRFCAGAPGQKGGHAQNLHPGSGRRFRFCAGAP
GQKGRHAQNLHPGSGGRFRFCAGAPGQKGRHAQNLHPDSGRRFRFCA

Sequences:

>Translated_127_residues
MRGSAGAEGGHAQNLHPGSGRRFRFCAGAPGQRGGHAQNLHPGSGRRFRFCAGAPGQKGGHAQNLHPGSGRRFRFCAGAP
GQKGRHAQNLHPGSGGRFRFCAGAPGQKGRHAQNLHPDSGRRFRFCA
>Mature_127_residues
MRGSAGAEGGHAQNLHPGSGRRFRFCAGAPGQRGGHAQNLHPGSGRRFRFCAGAPGQKGGHAQNLHPGSGRRFRFCAGAP
GQKGRHAQNLHPGSGGRFRFCAGAPGQKGRHAQNLHPDSGRRFRFCA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13369; Mature: 13369

Theoretical pI: Translated: 12.60; Mature: 12.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGSAGAEGGHAQNLHPGSGRRFRFCAGAPGQRGGHAQNLHPGSGRRFRFCAGAPGQKGG
CCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCC
HAQNLHPGSGRRFRFCAGAPGQKGRHAQNLHPGSGGRFRFCAGAPGQKGRHAQNLHPDSG
CCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCC
RRFRFCA
CEEEECC
>Mature Secondary Structure
MRGSAGAEGGHAQNLHPGSGRRFRFCAGAPGQRGGHAQNLHPGSGRRFRFCAGAPGQKGG
CCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCC
HAQNLHPGSGRRFRFCAGAPGQKGRHAQNLHPGSGGRFRFCAGAPGQKGRHAQNLHPDSG
CCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCC
RRFRFCA
CEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA