Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51893007

Identifier: 51893007

GI number: 51893007

Start: 2009127

End: 2009750

Strand: Reverse

Name: 51893007

Synonym: STH1869

Alternate gene names: NA

Gene position: 2009750-2009127 (Counterclockwise)

Preceding gene: 51893008

Following gene: 51893006

Centisome position: 56.36

GC content: 73.56

Gene sequence:

>624_bases
GTGAAGGGGCAGAGCGGGGAGCGCACCCTCCCGTTCTCGGTCCTGCTCAGTTCTCCCGGCCCCATCGTCGTCGGGGCCGG
GCTCCTGATCGGCCGTTCCTCCACCCAGTTGGCGGACTTCATCCGCCGTACGGCGGAGCTCGCGGCCATCGTGGTCTCCT
GGGCCGTCTACCGCGTCCTGCGCCGCGGCGGCGAGCCGGACTCCGCGCGCCGCCGGCGGCTGGAGCGAACCGCCAACGGG
TTCGTCGGCGGGGCCATGTGTCTCTCGGGCGCGGCCATGCTGGTGCTGGCGCTGTTCAGCGGCGGCGCGGAGAAGGGCAA
CGTCATCCCGGGGCTGGTCATCGCCGGCCTGGGCGTGACGACCAACGGCTGGTTCTGGTTCCGGTACCGCACCCTGGACC
GGCGTGAGCCCAGCGCCATCCTGGCGGCGCAGAGCCGGCTCTACCGCGCGAAGACCCTGGTGGACGGCTGCGTGACAGCC
GCGCTGGCCACCCTGGCCCTGGCGCCCGCCTCCCCGGCGGCGCGCTACGTCGACCTGGGCGGTTCCGCCGCGGTGGCCCT
CTACATGGTGATCAGCGGCGTCCTGATCGTGCGCGGCGGATCGCGGGCGGAGCGCACGGTATAG

Upstream 100 bases:

>100_bases
CGTGGAACTCTGCACCCGGGACGGCATGGACACCATCACCTGCCCGTTTGCGGCGGCCGCGGTGCTGATTCCGCTGGTGC
GGGCACTGGGGGTGTGAGGG

Downstream 100 bases:

>100_bases
ACCGCAGCGCTTGTTGAGCGCCCGGTCGGATTCGGCGGGACGGGATTCGGCGTGATCCGGCGGGCCTCAGGGGCGGGAGG
CGCCGGGCCGGGCAGGCGGG

Product: putative membrane transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MKGQSGERTLPFSVLLSSPGPIVVGAGLLIGRSSTQLADFIRRTAELAAIVVSWAVYRVLRRGGEPDSARRRRLERTANG
FVGGAMCLSGAAMLVLALFSGGAEKGNVIPGLVIAGLGVTTNGWFWFRYRTLDRREPSAILAAQSRLYRAKTLVDGCVTA
ALATLALAPASPAARYVDLGGSAAVALYMVISGVLIVRGGSRAERTV

Sequences:

>Translated_207_residues
MKGQSGERTLPFSVLLSSPGPIVVGAGLLIGRSSTQLADFIRRTAELAAIVVSWAVYRVLRRGGEPDSARRRRLERTANG
FVGGAMCLSGAAMLVLALFSGGAEKGNVIPGLVIAGLGVTTNGWFWFRYRTLDRREPSAILAAQSRLYRAKTLVDGCVTA
ALATLALAPASPAARYVDLGGSAAVALYMVISGVLIVRGGSRAERTV
>Mature_207_residues
MKGQSGERTLPFSVLLSSPGPIVVGAGLLIGRSSTQLADFIRRTAELAAIVVSWAVYRVLRRGGEPDSARRRRLERTANG
FVGGAMCLSGAAMLVLALFSGGAEKGNVIPGLVIAGLGVTTNGWFWFRYRTLDRREPSAILAAQSRLYRAKTLVDGCVTA
ALATLALAPASPAARYVDLGGSAAVALYMVISGVLIVRGGSRAERTV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21705; Mature: 21705

Theoretical pI: Translated: 11.62; Mature: 11.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGQSGERTLPFSVLLSSPGPIVVGAGLLIGRSSTQLADFIRRTAELAAIVVSWAVYRVL
CCCCCCCCCCCCEEEECCCCCEEEECCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRGGEPDSARRRRLERTANGFVGGAMCLSGAAMLVLALFSGGAEKGNVIPGLVIAGLGVT
HCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCC
TNGWFWFRYRTLDRREPSAILAAQSRLYRAKTLVDGCVTAALATLALAPASPAARYVDLG
CCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEECC
GSAAVALYMVISGVLIVRGGSRAERTV
CHHHHHHHHHHHCEEEEECCCCCCCCC
>Mature Secondary Structure
MKGQSGERTLPFSVLLSSPGPIVVGAGLLIGRSSTQLADFIRRTAELAAIVVSWAVYRVL
CCCCCCCCCCCCEEEECCCCCEEEECCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRGGEPDSARRRRLERTANGFVGGAMCLSGAAMLVLALFSGGAEKGNVIPGLVIAGLGVT
HCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCC
TNGWFWFRYRTLDRREPSAILAAQSRLYRAKTLVDGCVTAALATLALAPASPAARYVDLG
CCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEECC
GSAAVALYMVISGVLIVRGGSRAERTV
CHHHHHHHHHHHCEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA