Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51892992

Identifier: 51892992

GI number: 51892992

Start: 1997031

End: 1997900

Strand: Reverse

Name: 51892992

Synonym: STH1854

Alternate gene names: NA

Gene position: 1997900-1997031 (Counterclockwise)

Preceding gene: 51892993

Following gene: 51892990

Centisome position: 56.02

GC content: 75.98

Gene sequence:

>870_bases
ATGAGCCCTTCGTTTCTGCAACAGCTTGTGGACCGGCTCCGCCAGGAGCCCCGCGTGCTGGCCGTCTACGTGGACCGCGG
CCTGACCGCGCCCCGCACCGGCGAGGTGCAGGAAATCACCCTCCACCTGGCGGTGGAGGGCTCCTTCGCGCAGGCGGCGG
ACGCCTGGGCGGCCTCGCTGGCGGAGCTGGTTTACAGCGGACCGGAGTCCCACGGCTGGACCCTGATCACCCCGGACGGC
ACGGAGTGGCGTCTCTGCTTCCACGGCCCGTCGGCCGATTTCGCGGAGGAGGGGCTTCAGGGCGTGTTCGACCGCCGGGC
GCCGTCCCGGGTCCGGGAAGGCGCGCAGGAAGGCGCATCGCCCTCGCCCGGCGGGGCCGCCGGCCAGGCGCAGACGGACG
TGGCCGCGGTGGCGGCGGCCTTCTGGCGCGACCTGTACCGGGCCGCCCGGGCGATCCGGGCCGGGCGGGCCCTCACCGCG
CACCACTGGCTCTTCGCCTGCGGCGGCCGCATGATCGATCTGTACCGGCTTGCGCTTCAGCCCGGGCCCAGCGGCCGGGG
CTGGGAGGGCGCAGACGAGGTCCCCGGGATGGCGCGCGCTCTGGAGCCGGTGCGGGAGTTCCTGAGCAGCCCGCTGGAGT
GCCCGGCGCAGCGCCGGGCCGCCCGCCGGCTGGGCGAGGCGTTCGAGGGGCTGGTGCTGCCGCTCTGCCGGCGGATCGGC
GCCACCTACCCCATGGCCCTGCGCACCCTGACGTTCCGGGCACTGGAGCCGGAGCCGGACGCGGCGGGCGGAGGGGGGGC
GGCGCCTCATCCGTCGGACGCGACGGCCCGGGGGAGAGGGTCCGGCTCCGGGAGCGGGATGAACGTGTAG

Upstream 100 bases:

>100_bases
CCATTGGCCGCGGTCCGGGTTTCGTTCTAGAATAGGTGCGAATGGTGAGGGGCACCGCCGCCGGGATGCGGCGCCGCCCC
GCGCGCACGGGAGGAAACGT

Downstream 100 bases:

>100_bases
CCTGCCTCCCGCAGCGCCCGGATCAGGTCGGGGAGCACGGCCAGGGTCTGGGCGCGTTCGTGGATCAGGATGAGCGCCCC
GGGCTTCACCTGCTGCAGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 289; Mature: 288

Protein sequence:

>289_residues
MSPSFLQQLVDRLRQEPRVLAVYVDRGLTAPRTGEVQEITLHLAVEGSFAQAADAWAASLAELVYSGPESHGWTLITPDG
TEWRLCFHGPSADFAEEGLQGVFDRRAPSRVREGAQEGASPSPGGAAGQAQTDVAAVAAAFWRDLYRAARAIRAGRALTA
HHWLFACGGRMIDLYRLALQPGPSGRGWEGADEVPGMARALEPVREFLSSPLECPAQRRAARRLGEAFEGLVLPLCRRIG
ATYPMALRTLTFRALEPEPDAAGGGGAAPHPSDATARGRGSGSGSGMNV

Sequences:

>Translated_289_residues
MSPSFLQQLVDRLRQEPRVLAVYVDRGLTAPRTGEVQEITLHLAVEGSFAQAADAWAASLAELVYSGPESHGWTLITPDG
TEWRLCFHGPSADFAEEGLQGVFDRRAPSRVREGAQEGASPSPGGAAGQAQTDVAAVAAAFWRDLYRAARAIRAGRALTA
HHWLFACGGRMIDLYRLALQPGPSGRGWEGADEVPGMARALEPVREFLSSPLECPAQRRAARRLGEAFEGLVLPLCRRIG
ATYPMALRTLTFRALEPEPDAAGGGGAAPHPSDATARGRGSGSGSGMNV
>Mature_288_residues
SPSFLQQLVDRLRQEPRVLAVYVDRGLTAPRTGEVQEITLHLAVEGSFAQAADAWAASLAELVYSGPESHGWTLITPDGT
EWRLCFHGPSADFAEEGLQGVFDRRAPSRVREGAQEGASPSPGGAAGQAQTDVAAVAAAFWRDLYRAARAIRAGRALTAH
HWLFACGGRMIDLYRLALQPGPSGRGWEGADEVPGMARALEPVREFLSSPLECPAQRRAARRLGEAFEGLVLPLCRRIGA
TYPMALRTLTFRALEPEPDAAGGGGAAPHPSDATARGRGSGSGSGMNV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30722; Mature: 30591

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPSFLQQLVDRLRQEPRVLAVYVDRGLTAPRTGEVQEITLHLAVEGSFAQAADAWAASL
CCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHH
AELVYSGPESHGWTLITPDGTEWRLCFHGPSADFAEEGLQGVFDRRAPSRVREGAQEGAS
HHHHHCCCCCCCCEEECCCCCEEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCC
PSPGGAAGQAQTDVAAVAAAFWRDLYRAARAIRAGRALTAHHWLFACGGRMIDLYRLALQ
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHC
PGPSGRGWEGADEVPGMARALEPVREFLSSPLECPAQRRAARRLGEAFEGLVLPLCRRIG
CCCCCCCCCCCHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
ATYPMALRTLTFRALEPEPDAAGGGGAAPHPSDATARGRGSGSGSGMNV
CCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SPSFLQQLVDRLRQEPRVLAVYVDRGLTAPRTGEVQEITLHLAVEGSFAQAADAWAASL
CHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHH
AELVYSGPESHGWTLITPDGTEWRLCFHGPSADFAEEGLQGVFDRRAPSRVREGAQEGAS
HHHHHCCCCCCCCEEECCCCCEEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCC
PSPGGAAGQAQTDVAAVAAAFWRDLYRAARAIRAGRALTAHHWLFACGGRMIDLYRLALQ
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHC
PGPSGRGWEGADEVPGMARALEPVREFLSSPLECPAQRRAARRLGEAFEGLVLPLCRRIG
CCCCCCCCCCCHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
ATYPMALRTLTFRALEPEPDAAGGGGAAPHPSDATARGRGSGSGSGMNV
CCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA