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The map label for this gene is 51892901

Identifier: 51892901

GI number: 51892901

Start: 1909379

End: 1909918

Strand: Reverse

Name: 51892901

Synonym: STH1763

Alternate gene names: NA

Gene position: 1909918-1909379 (Counterclockwise)

Preceding gene: 51892902

Following gene: 51892898

Centisome position: 53.56

GC content: 65.56

Gene sequence:

>540_bases
ATGTGGGTCCAGCAGTACAAATACGGTGGCAGGAAGCACTACAGCTACCCGGTGCGGCTCATCGAAGAGCGTTCCGACGT
GATCATCGTTCACGGGGCGTACGGACGCCCCCTCACCCATCCGGGGAGGGGGCTGGTGGACTGGCCGGTGCCCAACGAGT
CGATCGAGTTCCACTTCACGTCTGCGCCGTGCTCCGTGAGCGCCGCCTGGAACGCCGACGGCTCCTTCCGGCATTATTAC
GGCAACGTGAACACGCCGGCCACGCTGTCGGAAGGCGTTCTTTCCCTGGTCGACCTGGACCTCGACCTGCTGGTGACCGA
GGACCTCGCGTGGCGGGTAGAGGATGAGGACGAGTTCGAGGCCCACCGCCGGGAATGGGGGTATCCCGAAGAGGTGGTGG
AACTGGCCAGAAGCGCGCTGGCGGAACTGATCCAGATGGTGGAGGAGCGGCGGTTTCCGTTTGACGGGTCTGCGTTCCGG
CTGCGGGAGCAGCTGTCCCGGTCGGGAGCACCCCGCGCAGAATCAGCCCGCCGCACCTGA

Upstream 100 bases:

>100_bases
CAGTTCGGCGCGGGAGTGACCCGTCAGAGAAACGGCGTTTCCGTTCACCTGAGCCACGACCGATGGGAAAAGCACAAGGA
GGAGGCGAAGCCCGCCTGCG

Downstream 100 bases:

>100_bases
TCGGCCCGCCGGGCACAACGGGCCGCTCCCGCTCGCCGAGGGTCAGCTCCGTGAAAGCAGGGCCCGCGCTGCAATGCGCG
GGCCTGGTTTGCCTGTCCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MWVQQYKYGGRKHYSYPVRLIEERSDVIIVHGAYGRPLTHPGRGLVDWPVPNESIEFHFTSAPCSVSAAWNADGSFRHYY
GNVNTPATLSEGVLSLVDLDLDLLVTEDLAWRVEDEDEFEAHRREWGYPEEVVELARSALAELIQMVEERRFPFDGSAFR
LREQLSRSGAPRAESARRT

Sequences:

>Translated_179_residues
MWVQQYKYGGRKHYSYPVRLIEERSDVIIVHGAYGRPLTHPGRGLVDWPVPNESIEFHFTSAPCSVSAAWNADGSFRHYY
GNVNTPATLSEGVLSLVDLDLDLLVTEDLAWRVEDEDEFEAHRREWGYPEEVVELARSALAELIQMVEERRFPFDGSAFR
LREQLSRSGAPRAESARRT
>Mature_179_residues
MWVQQYKYGGRKHYSYPVRLIEERSDVIIVHGAYGRPLTHPGRGLVDWPVPNESIEFHFTSAPCSVSAAWNADGSFRHYY
GNVNTPATLSEGVLSLVDLDLDLLVTEDLAWRVEDEDEFEAHRREWGYPEEVVELARSALAELIQMVEERRFPFDGSAFR
LREQLSRSGAPRAESARRT

Specific function: Unknown

COG id: COG3557

COG function: function code J; Uncharacterized domain/protein associated with RNAses G and E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0374 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007295
- InterPro:   IPR016882 [H]

Pfam domain/function: PF04167 DUF402 [H]

EC number: NA

Molecular weight: Translated: 20525; Mature: 20525

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWVQQYKYGGRKHYSYPVRLIEERSDVIIVHGAYGRPLTHPGRGLVDWPVPNESIEFHFT
CCCCCCCCCCEECCCCCHHEEECCCCEEEEECCCCCCCCCCCCCEEECCCCCCCEEEEEE
SAPCSVSAAWNADGSFRHYYGNVNTPATLSEGVLSLVDLDLDLLVTEDLAWRVEDEDEFE
CCCCEEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHCCHHEEEECCCEEEECCCHHHH
AHRREWGYPEEVVELARSALAELIQMVEERRFPFDGSAFRLREQLSRSGAPRAESARRT
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MWVQQYKYGGRKHYSYPVRLIEERSDVIIVHGAYGRPLTHPGRGLVDWPVPNESIEFHFT
CCCCCCCCCCEECCCCCHHEEECCCCEEEEECCCCCCCCCCCCCEEECCCCCCCEEEEEE
SAPCSVSAAWNADGSFRHYYGNVNTPATLSEGVLSLVDLDLDLLVTEDLAWRVEDEDEFE
CCCCEEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHCCHHEEEECCCEEEECCCHHHH
AHRREWGYPEEVVELARSALAELIQMVEERRFPFDGSAFRLREQLSRSGAPRAESARRT
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA