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The map label for this gene is cadC [H]

Identifier: 51892764

GI number: 51892764

Start: 1768479

End: 1768820

Strand: Reverse

Name: cadC [H]

Synonym: STH1626

Alternate gene names: 51892764

Gene position: 1768820-1768479 (Counterclockwise)

Preceding gene: 51892774

Following gene: 51892763

Centisome position: 49.6

GC content: 65.79

Gene sequence:

>342_bases
ATGGACGACGTCTGTCCCCGTCCGGATGCCGACGAGGCGCGGATCGAGAGCCTGCGGGAGCGGCTGCTGGATGTGGCCGG
CCTCTCGGAGCTGTTCCGGGTGCTGGCGGACGAGACCCGCACCAAGATCCTCTACCTGCTCGCCGCCGAGGAGCTCTGCG
TCCACGATCTGGCGCGGATCCTCGACCTCACGCTTCCCACCATCTCCCACCACCTGCGGCTGATGCGGCTGATGCGGCTT
GTGAAGAGCCGGCGAGAGGGCAAGCACGTCTACTACTCCCTCTCCGACGACCACGTGCTGCAGCTCATCCAGACCGCGCA
GGAACACTATCAGGAGGAGTAA

Upstream 100 bases:

>100_bases
TTGACAGAACACCGGCGGCAGGCGTATGCTTCCATTAGACAGCTATCTAATTGTCTTATCGAGGGGGTGTCGGGGCGTGG
AACGGCGCGGTGACCACCAG

Downstream 100 bases:

>100_bases
GCCAGATGGCCACAAAGGTCAGCTACAACCTGCAGGGGCTCGACTGCGCCGACTGCGCTGCCCGGATCCAGGACGCGCTC
CACCGGCAGGGGATGAGCGA

Product: transcription regulator ArsR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 113; Mature: 113

Protein sequence:

>113_residues
MDDVCPRPDADEARIESLRERLLDVAGLSELFRVLADETRTKILYLLAAEELCVHDLARILDLTLPTISHHLRLMRLMRL
VKSRREGKHVYYSLSDDHVLQLIQTAQEHYQEE

Sequences:

>Translated_113_residues
MDDVCPRPDADEARIESLRERLLDVAGLSELFRVLADETRTKILYLLAAEELCVHDLARILDLTLPTISHHLRLMRLMRL
VKSRREGKHVYYSLSDDHVLQLIQTAQEHYQEE
>Mature_113_residues
MDDVCPRPDADEARIESLRERLLDVAGLSELFRVLADETRTKILYLLAAEELCVHDLARILDLTLPTISHHLRLMRLMRL
VKSRREGKHVYYSLSDDHVLQLIQTAQEHYQEE

Specific function: Transcriptional Repressor For The Arsefg Operon. Arse Is A Trans-Acting Regulatory Protein Which Controls Its Own Expression. The Repressive Effect Of Arse Is Alleviated By Oxyions Of +III Oxidation State Of Arsenic, Antimony, And Bismuth, As Well As Arse

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH arsR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789916, Length=67, Percent_Identity=50.7462686567164, Blast_Score=61, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001845
- InterPro:   IPR018334
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01022 HTH_5 [H]

EC number: NA

Molecular weight: Translated: 13221; Mature: 13221

Theoretical pI: Translated: 5.55; Mature: 5.55

Prosite motif: PS00846 HTH_ARSR_1 ; PS50987 HTH_ARSR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDVCPRPDADEARIESLRERLLDVAGLSELFRVLADETRTKILYLLAAEELCVHDLARI
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LDLTLPTISHHLRLMRLMRLVKSRREGKHVYYSLSDDHVLQLIQTAQEHYQEE
HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDDVCPRPDADEARIESLRERLLDVAGLSELFRVLADETRTKILYLLAAEELCVHDLARI
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LDLTLPTISHHLRLMRLMRLVKSRREGKHVYYSLSDDHVLQLIQTAQEHYQEE
HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA