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The map label for this gene is ddh [H]

Identifier: 51892563

GI number: 51892563

Start: 1572637

End: 1573536

Strand: Reverse

Name: ddh [H]

Synonym: STH1425

Alternate gene names: 51892563

Gene position: 1573536-1572637 (Counterclockwise)

Preceding gene: 51892566

Following gene: 51892554

Centisome position: 44.12

GC content: 69.89

Gene sequence:

>900_bases
ATGGACAAGCTGCGCGTGGCGGTGGTCGGCTACGGCAACGTCGGCCGCTACGCCCTCGAAGCCGTTCAAGCCGCACCGGA
CATGGAGCTGGTGGGGGTCGTCCGCCGCAAGGTACTGGCCGCCACCCCGCCCGAGCTCACGGGCGTGAGGGTGGTGACCG
ACATCAGCCAACTGGAGGGCGTGCAGGGGGCCCTGCTGTGCGTGCCGACCCGGTCCGTGCCGGAGTACGCGGAGGCGATG
CTCCGCAGGGGGATCCACACGGTGGACAGCTACGACATCCACGGCGACCTGGCGGACCTGCGGCGCCGGCTCGACCCGGT
CGCGCGGGAACACGGGGCGGCTGCGGTGATCTCGGCCGGCTGGGACCCCGGCACCGACTCGATCATCCGGGCCCTGCTGG
AGTTCATGGCGCCGAAGGGGATCACCTACACCAACTTCGGCCCGGGCATGTCCATGGGTCATTCCGTGGCCGTCAAGGCC
ATCCCCGGGGTGCGGGACGCGCTGTCGATGACGATTCCCGCCGGCATGGGCGTACACAAGCGGGCGGTCTACGTGGAACT
GGAGCCGGGAGCCGACTTCGCCGAGGTGGAGCGCGCGATCAAGACCGACCCCTACTTCGTGCGCGACGAGACCCGGGTTA
CGCAGGTGGAGTCGGTCAGCGCGCTGATGGACGTCGGGCACGGCGTGGTCATGGAGCGCAAGGGCGTCTCCGGGGCCACC
CACAACCAGCTGTTCCGGTTCGAGATGCGCATCAACAACCCGGCGCTCACCGCGCAGGTCATGGTGGCGGCGCTGCGGGC
CGCCGCCCGGCAGAAGCCGGGGTGCTACACGATGATCGAGATCCCGGTCATCGACTACCTGCCGGGCGACCGGGAGGCGT
GGATCCGGAAGCTGGTGTAG

Upstream 100 bases:

>100_bases
CTAGCGAGCCGACTTCCATACAGGGGTGCATGGCACTGGCATAGCGCCGGCCGGAAGGGTAGAATGAACGTTAATCGAAC
TGGAGGAGGAGTTTCCAGCG

Downstream 100 bases:

>100_bases
CCAGAACCTCTGGCTGAAGCGAACAGAGCCTCTGTCCCGCCGCGCATGCGGCGGGACAGAGGCTCTTTCTGCTCAGCTCA
TACGGACGCCGGCGGTGTAC

Product: diaminopimelate dehydrogenase

Products: NA

Alternate protein names: Meso-DAP dehydrogenase [H]

Number of amino acids: Translated: 299; Mature: 299

Protein sequence:

>299_residues
MDKLRVAVVGYGNVGRYALEAVQAAPDMELVGVVRRKVLAATPPELTGVRVVTDISQLEGVQGALLCVPTRSVPEYAEAM
LRRGIHTVDSYDIHGDLADLRRRLDPVAREHGAAAVISAGWDPGTDSIIRALLEFMAPKGITYTNFGPGMSMGHSVAVKA
IPGVRDALSMTIPAGMGVHKRAVYVELEPGADFAEVERAIKTDPYFVRDETRVTQVESVSALMDVGHGVVMERKGVSGAT
HNQLFRFEMRINNPALTAQVMVAALRAAARQKPGCYTMIEIPVIDYLPGDREAWIRKLV

Sequences:

>Translated_299_residues
MDKLRVAVVGYGNVGRYALEAVQAAPDMELVGVVRRKVLAATPPELTGVRVVTDISQLEGVQGALLCVPTRSVPEYAEAM
LRRGIHTVDSYDIHGDLADLRRRLDPVAREHGAAAVISAGWDPGTDSIIRALLEFMAPKGITYTNFGPGMSMGHSVAVKA
IPGVRDALSMTIPAGMGVHKRAVYVELEPGADFAEVERAIKTDPYFVRDETRVTQVESVSALMDVGHGVVMERKGVSGAT
HNQLFRFEMRINNPALTAQVMVAALRAAARQKPGCYTMIEIPVIDYLPGDREAWIRKLV
>Mature_299_residues
MDKLRVAVVGYGNVGRYALEAVQAAPDMELVGVVRRKVLAATPPELTGVRVVTDISQLEGVQGALLCVPTRSVPEYAEAM
LRRGIHTVDSYDIHGDLADLRRRLDPVAREHGAAAVISAGWDPGTDSIIRALLEFMAPKGITYTNFGPGMSMGHSVAVKA
IPGVRDALSMTIPAGMGVHKRAVYVELEPGADFAEVERAIKTDPYFVRDETRVTQVESVSALMDVGHGVVMERKGVSGAT
HNQLFRFEMRINNPALTAQVMVAALRAAARQKPGCYTMIEIPVIDYLPGDREAWIRKLV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000846
- InterPro:   IPR010190
- InterPro:   IPR016040 [H]

Pfam domain/function: PF01113 DapB_N [H]

EC number: =1.4.1.16 [H]

Molecular weight: Translated: 32443; Mature: 32443

Theoretical pI: Translated: 7.22; Mature: 7.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKLRVAVVGYGNVGRYALEAVQAAPDMELVGVVRRKVLAATPPELTGVRVVTDISQLEG
CCCEEEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECHHHHCC
VQGALLCVPTRSVPEYAEAMLRRGIHTVDSYDIHGDLADLRRRLDPVAREHGAAAVISAG
CCEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECC
WDPGTDSIIRALLEFMAPKGITYTNFGPGMSMGHSVAVKAIPGVRDALSMTIPAGMGVHK
CCCCHHHHHHHHHHHHCCCCCEECCCCCCCCCCCEEEEEECCCHHHHHHEECCCCCCCCC
RAVYVELEPGADFAEVERAIKTDPYFVRDETRVTQVESVSALMDVGHGVVMERKGVSGAT
EEEEEEECCCCCHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHCCCCEEEECCCCCCCC
HNQLFRFEMRINNPALTAQVMVAALRAAARQKPGCYTMIEIPVIDYLPGDREAWIRKLV
CCEEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECEEECCCCCHHHHHHHCC
>Mature Secondary Structure
MDKLRVAVVGYGNVGRYALEAVQAAPDMELVGVVRRKVLAATPPELTGVRVVTDISQLEG
CCCEEEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECHHHHCC
VQGALLCVPTRSVPEYAEAMLRRGIHTVDSYDIHGDLADLRRRLDPVAREHGAAAVISAG
CCEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECC
WDPGTDSIIRALLEFMAPKGITYTNFGPGMSMGHSVAVKAIPGVRDALSMTIPAGMGVHK
CCCCHHHHHHHHHHHHCCCCCEECCCCCCCCCCCEEEEEECCCHHHHHHEECCCCCCCCC
RAVYVELEPGADFAEVERAIKTDPYFVRDETRVTQVESVSALMDVGHGVVMERKGVSGAT
EEEEEEECCCCCHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHCCCCEEEECCCCCCCC
HNQLFRFEMRINNPALTAQVMVAALRAAARQKPGCYTMIEIPVIDYLPGDREAWIRKLV
CCEEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECEEECCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3588313; 12948626; 8885833; 9521647 [H]